Xenopus tropicalis (tropical clawed frog): 100493700
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Entry
100493700 CDS
T01011
Symbol
tmc7
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100493700 (tmc7)
03037 Cilium and associated proteins [BR:
xtr03037
]
100493700 (tmc7)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
100493700 (tmc7)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
100493700 (tmc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
100493700
NCBI-ProteinID:
XP_017953054
Xenbase:
XB-GENE-981347
UniProt:
A0A6I8Q7D8
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All DBs
Position
9:32447386..32471666
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AA seq
720 aa
AA seq
DB search
MDSGQRLPMAHRFPDSPSSDGDNDVFLPDGSPAPVSEFLQELPSYQSLLRRKTSYYGTIE
RRRSTRQLKGSLSVDPSTFEPASEVMMTKPLRECALSMQEKRKLRDMQKLCSQYITGWSQ
WKQSSWNSCRKFKEDMAEFFCHLTLWRGNIHNIEGKFGTGIGSYFSFLRFLVILNFVMFL
LMFCFTTLPVAISKQGAFNSSNIIPSLADSECTYYSPGGYGLLYFYSNIIDLLSGTGFLE
LTYLFYGYYTIETVTFYVFNYSLPLAYVLVTISCLLLSIAWIVKRAVNGFKQSLVHDEDK
FQSYCNKIFAGWDFCITDQYSASLKHSSLQYELKTDLAEERIRQRKQKRTRGETFRIYFF
RFLLNIIVIGVLAGSFYAIYRATVYSLENSNTVSGSNADPINLLVEYLPSIVITIANIVT
PLIFESIVRYEDYSPAFEIRFTLIRCVFVRLASIAVLLISLWTRITSCQNQTCNLCGYNY
KMYPCWESRVGQEMYKLMIFDFLIIVALTLFVEFPRKLMVTYWSSKLVQWWGQQEFEIPQ
NVLEIVYGQTICWIGIFYSPLLPAIATVKYFIIFYIKKVSLIENCRPSTRPFRASSSNFF
FQVILLIGLVLACIPVGFGIAYIPASKACGLFVNFTTSWEIIPTVVKTFPNGLQKFIYVI
ASESFAVPFFLLSCLVMFYFIALAGAHKKVVEQLQEQLAMESRDKLFLIRRLTEVHHIKV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatagcggccagcgtttacctatggcacaccggttcccggacagcccgtcttccgac
ggagataacgatgtgtttcttccagatggaagtccagcgcctgttagtgaattcttgcag
gaattgccaagctaccagtccttgttaaggagaaaaacgtcctattatggaaccattgaa
agacgcaggagcacccgtcaacttaaaggttcactttctgttgatccgagcacttttgag
ccagcaagtgaggtgatgatgacaaaaccattaagggagtgtgcactcagtatgcaagaa
aaaaggaaattaagggatatgcagaagctgtgctcccagtacatcacaggatggagccag
tggaaacaatcaagttggaattcatgcagaaaatttaaggaggacatggctgaatttttc
tgtcatctaacactttggagaggaaacattcacaacattgagggtaaatttggaactggc
attggatcttatttctcatttcttaggtttctggtcattttgaattttgtgatgttcctg
ttgatgttttgttttactacacttcctgtcgccatttccaaacaaggagctttcaacagc
agcaatataattccatctctagctgattcggaatgcacatattattccccaggtggctat
ggacttctgtatttctacagtaatattattgacttactttccggaacggggtttctagag
ctcacctatctgttttatggatattataccatagagactgtcactttttatgtcttcaac
tacagtcttccacttgcttatgtgttggtcacaataagctgcctgttattgagcattgct
tggatagtaaaaagggctgtaaatggttttaaacaaagcctggtacatgatgaagacaaa
tttcagagctactgcaataaaatatttgcaggatgggatttctgtatcactgatcagtac
tcggcgagtcttaagcacagcagtttgcagtatgaattaaaaacagacctggcggaggaa
agaatccgccaaaggaaacagaagcggacaaggggagaaacattccgtatttattttttc
cgttttcttttaaatataattgtcattggagtgttggctggcagcttttatgcaatttac
cgagctactgtatattcactggaaaatagcaacacggtgagtggaagcaacgctgaccct
ataaacctgctagtggagtatttaccgtcaattgttatcactattgccaatattgtaacg
cctctgatcttcgaaagtattgttcgttatgaagattactctccagcctttgaaataaga
tttacattaatacgatgtgtgtttgtgcggttggccagcattgcagtactgttaatttcc
ctttggactcgaatcacatcctgccaaaaccagacttgtaacctttgtgggtataattat
aagatgtatccatgttgggaatctcgagtgggtcaggaaatgtataagctgatgattttt
gactttttaattattgtagcgttgactttatttgtagagtttcctcgcaaattgatggta
acatactggtcatctaaacttgtgcaatggtggggtcagcaggagtttgagattcctcag
aacgttttagagattgtctatgggcagaccatttgctggattggaatattttattcacct
cttctaccagccattgcaactgtgaagtacttcattatattttacattaaaaaggtcagt
ctaatagaaaactgtagaccatcaacaaggcctttccgggcctccagctctaattttttt
ttccaggtgatactgttgataggtctggtcttggcctgtattcccgtagggtttggaatt
gcatacatacctgcatctaaagcatgtggcctgtttgtgaattttactacatcatgggaa
attataccaactgttgtgaaaacatttccaaatgggctgcagaaattcatctatgtcata
gcctcagaatcttttgctgtcccctttttcttactctcatgtcttgtcatgttctatttc
attgctcttgctggagcacataaaaaagttgtggaacagctacaggaacaactagccatg
gaaagtcgggacaaactttttctcataagacggcttactgaagttcaccatatcaaagtt
tag
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