Xenopus tropicalis (tropical clawed frog): 100493727
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Entry
100493727 CDS
T01011
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100493727 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
100493727 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100493727 (vars2)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100493727 (vars2)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100493727 (vars2)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100493727 (vars2)
Prokaryotic type
100493727 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
100493727
NCBI-ProteinID:
XP_002940996
Xenbase:
XB-GENE-6046089
UniProt:
F7EBD8
LinkDB
All DBs
Position
8:complement(75889348..75914493)
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AA seq
1033 aa
AA seq
DB search
MQRLFSNPSQNVVSTLSRRGVAGSRERARRAERQQRKQNLLDEVAEQVPHVKGQNWKEKI
VLEYEAVTEPGKKKDISVPLPHSYSPRYVEAAWYPWWVRQGFFKPEYQSQQPHNGSETYS
LCIPPPNVTGSLHIGHALTVAIEDSLVRWKRMLGHKVLWVPGSDHAGIATQAVVEKKLLK
EKGLLRHDFSREEFLKEVWKWKEEKGDIIYHQLRSLGASLDWDRCCFTMDKMFSRAVSEA
FVRLHNDGLVYRHLRLVNWSCALRSAISDIEVDSRQLTGKTYISVPGYERKIPFGLLFSF
AYVTEGGDDEIIVSTTRPETMLGDTAVAVHPNDPRYLRFHGTRLHHPFTGQLIPVVTHDF
VNPDFGTGAVKVTPAHSLADFEMAQSLDLPVVSVIGEDGLMTENSGEWIQGVKRFDAREQ
ILSALKEKGLYRGDYEHAMVLPVCSRSGDVIEQLLKRQWFVSCKKMAQKALEAVNVGQLK
IIPSFHQKNWNHWLSNISDWCVSRQLWWGHQIPAYHVAVSEAQSDKDIRDEQEEIWVVAH
NESEAKKKASKKLRRPEKDLSVKRDEDVLDTWFSSALFPFAMLGWPENTSDLKDFYPNSL
LETGSDLLFFWVARMVMLGEHLTGKLPFKEVFLHSMVRDAHGRKMSKSLGNVIDPLDVIT
GISLEELQNRLQDGNLDPRELKVAEAGLLKAFPRGIPECGTDALRFALCSYKVQGDDINL
DVPSVLAVRHFCNKIWNGIKFTLSSLGESFSPIPVEEFKPQGPMDRWLLDHLRLLTEECE
RRFQAYELHGATGAIQTFWVQSYCDFYVEAVKPILKGPHGSDAQQTLYWGAEIVLRLLAP
FTPFLCEELWQRFPSASVNCAPSICVAQYPTPSQMAHWRYPEEVQQFDFVQSVIRTVRSL
RSDYHMTKARPEVHIFCSMEEHLNALQSFHSHLPTLSHSGPIQVHMLQDASQFREDPVGW
ATEKVSEGCYLRVKLQGLLDPHTELAKLHKKHQNLQLQFINMSKYENGDNEDKSIQQKIS
KVQCTMETLQRML
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctcttttctaaccccagccaaaatgtggtgtccacattgtcccgtagggga
gttgctggaagtagagaaagagccagacgtgctgagcgtcaacaacgaaaacagaatttg
ttggatgaggttgctgaacaggtaccccatgtcaaaggccaaaactggaaagagaagata
gtgctagaatatgaagcagtgacggagccaggaaaaaagaaagatatctcagttccttta
ccacattcatacagtcctcgttatgttgaagctgcttggtatccgtggtgggtaagacag
ggttttttcaagccagagtaccagagtcagcagcctcacaatggatcagagacctactca
ctttgcatacctccaccaaatgtcacaggctcccttcacattggacatgcacttactgta
gccattgaggattcacttgttcgatggaaaaggatgctgggccacaaggtgctttgggtc
cctgggtcagatcatgctggaattgccacccaggctgtggttgaaaagaaactgttgaag
gaaaagggtctcctacgccatgattttagtagagaggaatttttaaaagaagtttggaag
tggaaagaagagaaaggtgacataatttaccatcagctaagatccctaggtgcctctctt
gactgggatagatgctgctttacaatggacaagatgttctctcgtgctgtatctgaagca
tttgtccgcctgcataatgatggtttagtgtatcggcacctgcgtctggtgaattggtcc
tgtgccctgcgctctgcaatatctgacatagaggtagacagtcggcagttgactggaaag
acatatatttctgtcccaggttatgaaaggaaaatcccctttggacttctattcagcttt
gcctatgttactgaaggaggagatgatgagatcattgtatctacaactcgaccagaaacg
atgttgggggatactgcagtggctgttcatcctaatgacccaagatatttgagattccat
ggaacaagacttcaccatcctttcacagggcagctgatacctgttgtaactcatgatttt
gtgaacccagactttggaactggagcagtgaaggttactcctgcccacagcctggcagat
tttgagatggcacaaagcctggatttgccagtggtatcagtgattggagaggatggctta
atgacagagaacagtggagaatggattcagggtgtgaaaagatttgatgccagggagcag
atactaagtgctctgaaagaaaagggtctttacagaggtgactatgagcatgccatggtg
cttccagtatgcagccgctctggtgatgtaattgagcagctgttaaagaggcagtggttt
gtgagttgcaagaagatggcacaaaaggctctagaggctgtaaacgtaggacagctgaag
attatcccttcttttcaccagaagaactggaaccactggctctcaaacatcagtgattgg
tgtgtatcacgacaactttggtggggacatcagattccagcttaccatgtggcagtgtca
gaggcacagtcagacaaggatatacgtgatgagcaagaagaaatttgggtagtggctcat
aatgaatctgaagccaaaaaaaaagcttccaaaaaactaagaaggccagaaaaggatctt
tccgtgaagagggatgaagatgttctggatacatggttttcatctgcccttttcccattt
gctatgctgggctggccagaaaatacaagtgacctgaaggatttttacccaaactctctc
ttggagactggtagtgatttacttttcttctgggtggctcgaatggtaatgttgggagag
catctaactgggaagttaccattcaaagaggtatttctgcattctatggttcgagatgct
catggaaggaaaatgagcaaatctttaggaaatgtgattgatccattagatgtgataact
ggaatatcactagaggaattgcagaataggttgcaagatggcaatttagatcctcgagag
ctgaaagttgcagaggctgggttgttaaaggcttttcctcgtgggattcctgagtgtggc
acagatgctttgcgatttgccctttgttcctacaaggtacaaggggatgatataaatcta
gatgtgccatctgttcttgctgtccgccatttttgtaataaaatctggaatgggattaaa
tttaccctctcttctcttggggaaagcttctcacctattcctgtggaagagttcaaacct
cagggccccatggatcgctggttactagatcacttgcgtcttttgacagaagaatgtgag
agaaggtttcaggcttatgaacttcatggagcaacaggagccatccagacattttgggtg
cagagctactgtgacttctatgtggaagcagtaaagcctatcttaaaagggccacatggc
agtgatgcacaacagactttgtactggggagcagagattgtccttcgtcttctcgccccc
tttactccttttttatgtgaagagctgtggcagcggtttccttcagcctctgtgaattgt
gcaccaagcatctgtgttgcccagtatcccacacctagccagatggctcattggaggtac
ccagaagaagtgcaacagtttgattttgtgcagtcagtcattagaactgtgcgcagtctg
cgaagcgactatcacatgactaaggcacgaccagaggttcatattttctgctccatggaa
gaacatctcaatgctcttcagtcatttcactcacatttgccgactctgtctcactctgga
cccatccaagtccatatgttgcaagatgcttctcagttcagggaggaccctgttggctgg
gctacagaaaaagtgtctgagggctgttaccttcgtgttaaactccagggtttactagac
ccccacacagagcttgcaaaactgcacaaaaagcatcagaatcttcagcttcagtttata
aacatgtcaaaatatgagaatggcgataatgaggataaatcaattcagcagaaaatctcc
aaggttcaatgtacaatggaaacattacagagaatgctataa
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