Xenopus tropicalis (tropical clawed frog): 100493770
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Entry
100493770 CDS
T01011
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100493770
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100493770
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
100493770
NCBI-ProteinID:
XP_031750355
UniProt:
A0A6I8R0C1
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Position
10:complement(49492583..49608797)
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AA seq
602 aa
AA seq
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MLRCPLVLVLLSLSCTAQEGRGGYGMNMFSIQTSQPDPCYDENGNPRRCIPDFVNSAFGK
EVRVSGTCGKPPSRYCVVTEKGEDRFRNCHICNTSDPKRAHPPSFLTDLNNPHNLTCWQS
ENYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQFYSTQCR
KMYNKPNKAIITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWV
TATDIKVVFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDDNL
VCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFKLSGR
RSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITHRKACKACDCHPVGAAGKTCNQTTGQ
CPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTAASSMEEPADCDAYCKASKGK
LKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNVISVYKQGTNRIRRGDQNLWIRAKDI
ACKCPKLKPTKKYLLLGNDEDSPDQNGVVADKSSLVIQWRDTWARRLRKFQQREKKGKCK
KA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtgcccgttggtgttggtcctgctgtccctgtcctgcacggctcaggagggg
agagggggctacgggatgaacatgttttccatccagacgtctcagccggacccctgctac
gacgagaacggcaacccgagaaggtgcatcccggactttgtcaactcagccttcggcaaa
gaggtgcgggtgtccggcacgtgcgggaagcccccgtccagatactgcgtggtgacggaa
aaaggcgaagatcgcttccgcaactgtcacatttgcaatacgtctgaccccaaaagggct
catccgccttccttcttaaccgacctcaacaatccccacaacctgacttgctggcagtcg
gagaactatatccagtacccccaaaatgtcaccctgaccctctccctagggaagaagttc
gaggtcacgtacgtgagcctccagttttgctccccgagacccgaatccatggctatcttt
aaatctatggactacggcaagtcgtgggtaccatttcagttctactcgacccagtgccga
aagatgtacaacaaacccaataaagccatcatcaccaagcagaatgagcaggaagccatc
tgcacggactcccatacggacatgcaccctctctccgggggactcatcgccttcagcacc
ctggatgggagaccgtccgctcatgactttgacaactcccctgtcctccaagactgggtg
acggccacggacatcaaggtggttttcagccggctccacacttttggggatgagaacgaa
gacgactcggaactggccagggactcctatttctacgccgtctcggacctccaggtgggg
gggcgatgcaagtgcaatggccacgcttccaggtgtgtcaaggacagagacgacaacttg
gtgtgtgactgcaaacacaacacggcggggcccgaatgtgaccgatgtaaacccttccac
tacgaccgaccgtggcagcgagcgacagcgcgagaagccaatgagtgtgtggcctgtaac
tgcaacctgcacgcccggcgctgccgattcaacatggagctgttcaaactgtcagggcgg
cggagcggcggtgtctgtctaaactgccggcacaacacagcggggcggcactgccactac
tgcaaggagggttactaccgggatatgaccaaacccatcacccacagaaaggcctgcaaa
gcctgcgattgccatccggtgggtgcggccggcaaaacctgtaatcagaccacggggcag
tgtccttgcaaagatggcgtgactggcataacgtgcaatcgatgtgccaagggctaccaa
caaagccgctcgcccattgccccctgcataaagattcccgtggtccctcctacaacggca
gccagcagcatggaggagccggcagactgcgacgcctactgcaaggcatccaagggcaag
ctaaagatcaacatgaagaagtactgcaagaaagattacgccgtgcaaatccacatccta
aaggcggacaaagccggagactggtggaagttcacggtcaacgtcatctccgtgtacaaa
cagggcaccaaccgcatccggcggggcgaccagaacctgtggatccgggccaaggacatc
gcctgcaaatgccccaagctgaagcccaccaagaagtacctgctcctgggcaacgacgag
gactcgcccgaccagaacggcgtggtggcagataagagcagtttggttattcagtggcgg
gacacgtgggcacggcggctcaggaagttccagcagagggaaaagaagggcaaatgcaag
aaagcttag
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