Xenopus tropicalis (tropical clawed frog): 100493832
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Entry
100493832 CDS
T01011
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100493832 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100493832 (mlh3)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100493832 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100493832
NCBI-ProteinID:
NP_001238771
Xenbase:
XB-GENE-991852
UniProt:
A0A8J0QEP2
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Position
8:complement(82216339..82244137)
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AA seq
1292 aa
AA seq
DB search
MIRCLKEEVQHKLRSGVTISSVGQCVEELVLNSIDALSTCIAVRIDLETVRIQVVDNGSG
LCPEDLDRLGMRYFTSKCHSLNDLENLKFHGFRGEAIASIADVSSIVEISSKCKNTSKTF
YKLIQNGKLLSVQEANTSRPSAGTTFSVYNLFYNLPVRRKCMDQTVEFENIRQRVESLSL
IHPSISFSLKNDAMHSVVLQLAKTKDVCSRFCQIYGLPRSQKLCEIQHKVREFDMWGYIS
CEGHYNKRMQYLYVNNRLVLKTKLHQHIDFLLRKESLICKPKNINVGKTSSPGRSRSCQE
LYGIFIININCHYSEYDVCFEPAKTLIEFKDWDTVLRFVEEGVKAFLKREKLYVEPPKED
TLGKSESNFIACTDFQLVKKQDIEVFKDACCNVRHNYENSILQSKSVCRTANVSTQVLNV
NATIHNDTSESTHDSILECNTDKISKSRRFSPRNCNENEFCAAPTTECQQDTGEKCNADT
FSHAECSELPNNSCCAVIQIDACENENSAQEKQTDGQCGAEQCNTQSAATLCNYKDLTVD
ESASGIGCFRLLNHLCPNPSMHSSKAEGLFKLFSRPGPLSGQEMFKNNSHTLNSSTRPNS
KGSLPSYSKITEERKKITVSKNVSFANAEPRTTISNSTKKNCNRLLGLVAQRESLETFKQ
YFGKLQASTSCQSAPATVTSDTSLYLKHTDLNLCQNNSSKNTHCNEVVEENFTSSNNLMF
QFPVNEITSSEEILIPMSQNPKSPDPQHPKESPLTLPHYERLKQTGSSAQITFGSLAAKL
SKLKQGEKVDSCVNATNLKELLNVSVHSDDKTTMDGQRTQNSGPGKIQDSTAMKFLEPCL
TQAIHANISNLYEQSSFKVPLSVPSVSCCEDSGGFVSADWFQCYEESLGKHVYLNTATGL
SSYICPKMDDSTICTKDLTTTAVNIVCNNGFQYQCYPFRSDALVPFLPRPREERAHTKLN
TDNSENSILKSLFSEWENPVFTRHPEVAVDVSRGQTNTLAVKIHNILYPYRFTKEMMHSV
KVLQQVDNKFIACLMNTKMKEGSEQDSYESAPEDDSGRRQLKMSVISPPLELNVTEIQYR
LLRVLARSSQSIGLSLSFPDTQGPCVLVSAVPVCFVEREANELHRRRSTVAKNLVQEFLQ
EQVELLQMTRRAGGTIPLTVLKVLASQACHGAIKFHDQLSLDDCKHLMQCLSRCSLPFQC
AHGRPAILPLADMLHLEPCDQILAKPNLKSLKRQCRAWELTKGNHLPIPNKQDTEPTSPK
KVATQQPNNSLANETMKVIIEEVMALPNNEEL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgattcgatgcttgaaagaagaagtacaacacaaactacggtctggagtcaccatcagt
tcagttggacaatgtgttgaggaactggtcttaaacagcattgatgctctttcaacatgt
attgctgtgcgcattgatttggaaactgtcagaatccaagtggtagataatggtagtgga
ttgtgcccagaagatttggacagattgggtatgcgttattttacaagcaaatgccattcc
ttaaacgacttggaaaacttaaagtttcatggttttcggggggaagccatagcaagcatt
gctgatgtttctagcatagtggaaatatcatctaaatgcaagaacacatcaaaaacattt
tataaacttattcagaatggaaaactactcagtgtgcaagaagcaaataccagtaggcct
agtgcaggtactacattttcagtctacaatcttttctataacttgccagtgcggagaaaa
tgcatggaccaaactgttgaatttgagaacatacgccagagagtggaatctttgtctctc
atacacccctcaatttctttctcattgaaaaatgatgctatgcattctgtagttttgcag
ctggccaaaaccaaggatgtgtgttctcgtttttgtcagatttacgggctacctagatct
caaaagctttgtgagatccagcataaagtgagggagtttgacatgtggggttatatcagc
tgtgaaggccattacaataaaagaatgcaatatctgtatgttaacaatagacttgttctc
aaaacaaaattgcatcagcatatcgattttttattaagaaaagaaagtttgatctgcaaa
cctaaaaatataaatgtaggaaaaacaagtagtccaggtagaagtcgttcatgtcaagag
ctttatggaatctttataataaatattaattgccactattcggaatatgatgtttgcttt
gagccagcaaaaacattaattgaattcaaggactgggacactgtattgcgatttgttgaa
gaaggtgttaaggcattcttaaaaagagagaaattatatgtagagccacccaaagaagat
acacttggaaagtctgaaagtaactttatcgcttgtacagattttcagctggtaaaaaag
caagatatagaggtttttaaggatgcatgttgtaatgtaagacacaattatgaaaactca
attcttcagtcaaaatcagtgtgcagaactgctaatgttagcacacaagttttaaatgtt
aatgctactattcacaatgacacaagtgaatcaacacatgactctattcttgaatgtaac
actgataaaatatcaaagtcaaggagattttctcccagaaactgcaatgaaaatgaattt
tgtgcagcccccaccactgaatgtcagcaagacactggtgagaaatgtaatgcagatact
ttcagtcatgctgaatgttcagaattaccgaataattcctgttgtgctgtgatacaaata
gatgcatgtgaaaatgaaaattctgctcaagaaaaacaaactgatggacaatgtggagct
gaacaatgcaacacccagtctgcagctacattgtgtaactacaaggacttaactgttgat
gaatcagccagtggtataggctgcttcaggctgctaaatcatttatgtccaaatcccagt
atgcattctagtaaagctgaaggtctgtttaaattattctcccgaccaggtcctttaagt
ggccaggaaatgtttaaaaataattcacatactttaaacagtagtacaaggccaaatagc
aaaggcagtttgccatcatacagtaaaataacagaagaaagaaaaaaaataacagtatca
aagaatgtatcctttgctaatgcagaacctagaactaccatctcaaattccacaaagaaa
aattgtaacagactgctcggtttggttgcacaaagagaatctttggagacatttaaacaa
tattttggaaaattgcaagcatcaacttcttgccagtctgccccagctactgtcacttca
gatacatccttatatctaaaacacactgacctaaatctgtgtcagaataatagctcaaaa
aatactcattgcaatgaggtggtagaggaaaattttacatcttcaaataatctaatgttc
cagtttccagtgaatgaaataacctcttcagaagaaattctaataccaatgagtcagaat
cctaaaagccctgacccacaacatcccaaagagagtcctttgaccttgccacactatgaa
aggctaaagcagactggatccagtgcacaaatcacttttggttcattggcagcaaagcta
agcaaacttaagcagggagaaaaagtggattcatgtgtgaatgcgacaaatctcaaggag
ttgcttaatgtttcagtacattcagatgacaaaacaacaatggatggccagagaacacaa
aattctggtcctggcaaaatacaggacagtacagctatgaaatttctagaaccttgtcta
acacaagctattcatgcaaacatatctaatttatatgagcaaagtagctttaaagtgcca
ctttctgttccttctgtaagctgttgtgaagattctggtggttttgtctctgctgattgg
tttcagtgttatgaagagtctcttggaaaacatgtttaccttaacaccgcaacaggactc
agcagttacatttgtccgaagatggatgacagcacaatctgcaccaaagatttaactacc
acagctgtgaacatagtttgcaataatggatttcagtaccagtgttatccatttaggagt
gatgcccttgtgccatttcttcctagaccacgtgaagaaagagcacatacaaaacttaat
acagataattcagaaaacagtatcctgaagtccttgttctcagaatgggaaaatccagtg
tttactcgccatcctgaggtggctgtggatgtgagcaggggacagacaaatactctggca
gtaaaaattcacaatatattgtatccatatcgtttcacaaaggaaatgatgcactctgtg
aaggttcttcagcaggtggacaataaattcattgcttgtttgatgaacacaaagatgaag
gagggatcagagcaagattcctatgagtcagcaccagaggatgattcagggaggcgacaa
ctgaagatgtctgttatcagtcctcccctggaactgaatgtgacagagattcagtaccgg
cttcttagggtccttgctaggagttcgcaaagtattggcttgtctctgtcatttcctgat
actcaaggtccatgtgtcctggtgtcagcagtccctgtgtgttttgtagagagagaagca
aatgaattacatcgtagaaggtcaacagtagctaaaaaccttgtgcaggagtttctacaa
gaacaggtggagctgttgcagatgacgagacgagcaggtggtaccattccactgacagta
ctgaaggttttggcatcacaagcttgtcatggtgctatcaaatttcatgatcagcttagt
ttggatgactgcaagcacctgatgcagtgcctgtcacgttgtagccttccatttcagtgc
gcacatgggagacctgcaatcctaccacttgcagacatgctgcatcttgagccttgtgac
cagattctggcaaaacctaaccttaaaagtctgaagagacagtgcagagcctgggagctg
actaaagggaaccacctccccattccaaataagcaagacacagagcctaccagcccaaaa
aaggtagcaacccagcagccaaataattcattggctaatgaaacaatgaaggtcatcatt
gaagaggtaatggctttacccaacaacgaggaattatga
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