Xenopus tropicalis (tropical clawed frog): 100493847
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Entry
100493847 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF58.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100493847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100493847
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100493847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_11
zf_UBZ
Zn-ribbon_8
HVO_2753_ZBP
Zn_ribbon_SprT
ADD_ATRX
zf-LYAR
zf-met
Motif
Other DBs
NCBI-GeneID:
100493847
NCBI-ProteinID:
XP_017950229
UniProt:
A0A8J0T3M0
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All DBs
Position
6:6020206..6023076
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AA seq
721 aa
AA seq
DB search
MNRERREGLGARKQTGSDTNRKFPTCNGFVARSTHSNQPPVLQKPHAQEMNSAPKAQQNQ
MPQLCTVTGGKLIVTPKLTKHTQPDAEEKLHGSQKMNNISGKIQYSTVHQTRKTLAQSTK
QTVFPKPFGVINPFVCVKCKRRFGSNGNLLIHQRIHTERPFSCTDCGKCFSHRTILREHR
RAHMGKGPFPHSTGGNKIPSGKGNFQRHQGASAKGKPLTCTECGKSFKRKSYLRVHERTH
TGEKPYVCTQCGKGFSWKESLNTHSVIHSTEKPFTCTECGKCFRMKQHLKSHEKTHTGVK
DFVCTECGKQFAHQNHLRQHQRIHTGEKPFVCSECGKSYTQKINLKIHLRVHTGEKPFAC
TECNKIFRSDRWLHAHKLTHTGVKPFQCKECDQSFLIKGHLKVHQRTHTGERPYTCPECG
KSFITHLSLSRHYDSHIGKKPYACTECGKCFLMKINLKSHEKTHTGIKDFVCTECGKQFF
QKHSLRQHQLIHTGEKPFVCSECGKSYRLKIGLKAHLRVHTGEKPFACTECNKTFRSVQG
LHEHKLTHTGVKPFQCNECGKSFSAKGVLKAHQRIHTGEKPYTCAECGKSFTAQESLNQH
SHTHTGIKPYACTECEKRFRKKADLKYHQYTHTGEKPFECTECGKCFPKKFAMKRHQFIH
TGLKPFQCTECGKSFDTKYHLTAHHLTHTGIKAFVCTECGKQFVAKRSLRQHLKIHTGEK
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggagaggagagaagggcttggtgcaaggaagcagacaggaagtgacacaaac
aggaagttccctacatgcaatggctttgttgccagatctacccacagtaaccaacctccg
gtgcttcagaaacctcacgcccaggagatgaattctgccccaaaagcccaacagaaccaa
atgccccaactttgcacagtaactggggggaagctgattgtaacccccaaattaacaaaa
cacacacagcctgatgctgaggaaaagctacatggaagtcagaaaatgaacaatatttca
ggcaaaatccaatattctactgtacatcagacaagaaagacattagcccaaagcacaaag
caaactgtgttccctaaaccatttggggttataaatccgtttgtctgtgttaagtgcaag
agaaggttcggcagcaatgggaacctcctcatccatcagcgcattcacacagagagaccg
ttctcttgcactgattgtgggaaatgtttctcccacagaaccatcctccgagagcaccgc
cgggctcatatgggaaaggggcccttcccccacagcactgggggcaataaaatcccatca
ggtaagggcaactttcagaggcaccaaggggcgagtgctaaagggaaaccactcacctgc
actgagtgtgggaaatcattcaaacgcaagtcttatttgcgcgtacatgaacgcacacac
accggggagaaaccttatgtttgtacccaatgtggtaaaggcttttcctggaaggagagt
cttaatacacattcagttattcattctacagagaaaccttttacctgcactgagtgtggg
aaatgtttccgtatgaagcaacatcttaaatctcatgagaagactcacactggggttaaa
gattttgtctgtacagagtgtgggaaacaattcgctcaccaaaaccacctccggcaacac
cagcgcattcacaccggtgagaaaccatttgtctgcagtgagtgtgggaaaagctacacg
cagaaaataaacctaaagattcatctgcgcgttcacacaggagagaaaccctttgcctgc
acagagtgcaataaaatcttccgatcagatcgttggctccatgcccacaaactgactcac
actggtgtgaagccttttcagtgcaaagagtgtgatcagtccttcttaataaagggtcat
cttaaggttcatcagcggacacatacaggagagagaccttacacctgtcctgaatgcggg
aagagttttataacgcatttatccttaagtcgacactatgacagtcacatcgggaaaaag
ccatacgcctgtacagagtgtgggaaatgtttccttatgaagatcaatctcaaatctcat
gagaagactcacactggaattaaagattttgtctgtacagagtgtgggaaacagttcttt
caaaaacacagcctccgccaacaccagctgattcacaccggtgagaaaccatttgtctgc
agtgagtgtgggaaaagctacaggcttaagattggcctaaaagctcatctgcgagttcac
acaggagagaaaccctttgcctgcacagagtgcaataaaaccttccgatcagtgcaagga
ttacatgaacacaaactgactcacactggtgtgaagccttttcagtgcaatgaatgtggt
aaatccttctcagcaaagggagttcttaaggctcatcaaaggatacatacaggagagaaa
ccttatacctgtgctgaatgtgggaaaagctttacagcacaagaatccttaaatcaacac
agtcacactcacactgggataaagccatacgcctgtacagagtgtgagaaacgttttaga
aaaaaggctgatctgaaataccaccaatatacccatactggggagaaaccatttgagtgt
acagagtgtgggaaatgttttccaaaaaagtttgcaatgaaacgccaccaatttatccat
actgggttgaaaccatttcagtgtacagagtgtgggaaaagctttgatactaaatatcat
cttacagctcaccacctgactcacactgggattaaagcttttgtctgtaccgagtgtggg
aaacagtttgtggccaaaagaagcctccggcagcacctgaagattcacaccggtgagaag
cgctag
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