Xenopus tropicalis (tropical clawed frog): 100493921
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Entry
100493921 CDS
T01011
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X3
KO
K21952
CASK-interacting protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100493921 (caskin1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
100493921 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
Ank_3
Caskin-tail
SAM_2
SH3_2
Ank_KRIT1
SH3_9
SH3_1
ANK_LRRK2
ATP-synt_Z
Motif
Other DBs
NCBI-GeneID:
100493921
NCBI-ProteinID:
XP_002932514
Xenbase:
XB-GENE-492082
UniProt:
A0A8J0QJ55
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All DBs
Position
9:19462213..19600224
Genome browser
AA seq
1431 aa
AA seq
DB search
MGKDQELLQAVKTEDLGMVQKLLQRPKAGKAKLLGSAKRVNVNFQDTDGFSALHHAALSG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKLLLKSGSAVNIPSDEGQIPLH
QAAQHGHYDVSEMLLQHQSNPCIMDISGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDSTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVRLL
LDSGINAHIRNTYSQSALDIVNQFTGTQASKEIKHMLREASAALQVRAMKDYCNNYDLTS
LNIKMGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSNLVEAISRRTGSRGSESSPSH
MSPGPTSMPPTEEIWVLRKPLAGGDRSSMGSTGSATSGRSSGSGQSAGSAHAIHAGAEGV
KLLATVLSQKALGQEPGDACETPAGSSRPQSVASSPYIEQAYGDHPKKMEPQTEGKSSEA
VFQWLCKFQLQLYAPNFINSGYDIPTISRMTPEDLTAIGVTKPGHRKKIFSEINNLNIGE
WLPEYKPANLSLWLTMIGLIQYYKVLVENGYENIDFITDITWEDLQEIGITKLGHQKKLM
LAVKKLAEIQKSEYGKFDSGSMRRRVPQKSLESASDSPLSESAECQSPKMKTFQDSELSD
ELQAAMTGEAPEGSEKQINHVSHHRESPGYRGPPGARLHHESSLSGRARHISSSQELLGD
GSKAPSTVMSKSQEYLTEEVKKEEVVKETRPFRQGHSVKRASVPPVPGKPRHSFPSPGGQ
SYTPPQTPTKGTPSSPQAMGVPQATAKVKPTPQLLPPSDRPMSPRSLPQSPTHRGFAYVL
PQPIEGEGTPTHLAQAVPVLPVTVPVLCLPPAGSDGEDEEEETGEGEHGRPKKRAHSLNR
YAASDGEREELMVIDGGPYGTGQRRVGRSHSVRSQSGNDKNVNRSQSFAVRPRKKGPPPP
PPKRSSSAISGTNLGDGLSADEAGGENYREQRRASDFGGVVDTESAGSVRSIAAMLELSS
IGGGPRALSGQRPRGSDGICAHLLPHPGSPELQRVPGIVIGLKHREAIGLDGEVVNRRRT
ISGPVTGLVTASRRERTEPPKSPDSPRSPSEGIPFAEERKQTVKYRARPSRTEHIDSIGS
GVSKQTDLSSVESSVTLKRRVRARQSQHSGDVKFLLTESDTVKRRPKPRDKDSGIGGVEP
LTVFQNGTGTLKRRPVSEMSSGGRQDSTEHIAHTPERSIKPPVSPKPTIIQATGKSHPPC
TPTAAKKIPGPLGDLKKGIPPPVSPKPTPPPTAPKPTKPHAVIQSSSASSTPAPSPVKQP
NSIKPSSTPPSLCSSPAKPLSPGHPLQVPIKPPRLSISSSSVEGGSSEAAQQKLEETSAS
LAAALQAVEEKIKQEDAQKASSMEEKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggagctgctccaggctgtgaagaccgaggacctggggatggtacag
aagctgctgcagagacccaaggcaggcaaagccaagcttctgggttccgcaaagagagtg
aatgtaaatttccaagacaccgatggattctctgccctccatcatgctgcccttagtggg
aacactgagctcatctcgctgctcctggaggcccaagctgcggtggacatcaaagataac
aaagggatgcggccactgcactatgcagcctggcagggaaagaaagagccaatgaaattg
ctcctcaaatctggctctgctgtgaatattccatcagatgaggggcagatccctttgcac
caagcagctcagcatgggcattatgatgtgtctgagatgttgctgcagcaccagtccaac
ccgtgcatcatggatatatcaggaaagactcccttggatttggcttgtgagtttggaaga
gttggggtcgttcagctgttgctaaacagtaacatgtgtgccgcattgctagagcccaaa
ccaggagacagcactgaccccaatggaactagccccttgcatctggctgctaagaatggt
cacatcgatatcatcaggcttctgctgcaggccggcatcgacattaaccggcaaaccaaa
tctggcacggctcttcacgaggcagccttgtgtgggaaaactgaagtggtgcgcctttta
ctggatagtggaataaacgctcatatcagaaatacctacagccagtcagccctggatatt
gtgaaccagttcacaggaacgcaagctagcaaggaaatcaaacatatgcttagagaagct
tccgcagctctgcaggtcagggcaatgaaggactattgcaataattatgatctgaccagc
ttgaatataaaaatgggggatgttattacggtcttagaacagcatcctgatggccgttgg
aaaggatgcatccatgataaccggacaggaaacgacagagtgggttactttccttcaaac
ctggttgaagccatcagcaggcgaacaggttcccggggttcagaatcaagcccctcgcac
atgtctccgggacccacatctatgcccccaactgaggaaatctgggtactaaggaaacct
ttggcaggtggtgatcggagcagcatgggcagtacgggaagtgccacaagtggccggagt
tctgggagcgggcaaagtgcgggcagtgcccatgctattcacgctggcgcagagggggtt
aagctgctcgccactgttctttcccagaaggcattggggcaggagcctggagacgcctgt
gagacccccgcaggatcctctcggcctcagagcgttgcaagctcaccttatatcgaacag
gcatatggcgatcatcccaaaaagatggagcctcaaaccgaaggcaagagttccgaggct
gtgttccagtggctgtgcaagtttcagctccaactatatgccccaaacttcatcaattct
gggtatgacatcccaactatcagtcgcatgactcccgaggacctcacagcaattggggtg
actaagcccgggcatcggaagaagatcttctctgagatcaacaacctgaacataggggaa
tggcttccagaatataaaccagcaaatctatcgctctggctgacaatgattgggctcatc
cagtactacaaggtgttagtagaaaatggctatgaaaacattgattttatcacagacatc
acttgggaagacttacaagagatcggcatcaccaaactcggccaccagaagaagctgatg
ttggccgtgaagaagctggccgagatacagaaatcagaatatgggaagtttgattcagga
agcatgagaaggagggttccccaaaagagcttggagtcggcatctgattcgcctctgtct
gagagtgccgagtgccaatctcccaagatgaagactttccaggacagtgagctaagcgat
gagttgcaggcagccatgactggtgaagctccagaaggctctgaaaaacagattaaccat
gtgtcacaccacagagagagccctggatacagagggccaccaggagcacggctacaccat
gagagcagtttgagtggccgcgctaggcacatcagcagctcccaggaactccttggtgat
ggcagcaaagccccaagcactgtaatgtctaaaagtcaggagtacttaactgaggaggtg
aaaaaagaggaggtggtaaaagaaactaggccttttagacagggtcactcagtgaagaga
gcaagtgtgccccctgtgccagggaagccacgacattcattcccttcccctggcgggcaa
agctacaccccacctcaaactcctaccaaaggaactccctcatctccacaggccatgggt
gtccctcaagccacagccaaagtaaaacctacaccacaacttcttccaccttctgaccgc
ccaatgtcaccacgctccctcccacagtcccctacacatagaggctttgcctacgttctt
ccacaaccgattgagggtgaggggacacctactcatttggcacaggcagtgccagtattg
ccagtgacagtgcctgtgttatgcctgccacctgctgggagcgatggagaagatgaagaa
gaagaaacaggggagggagaacatggaagacccaagaaacgggcacacagcctcaaccga
tatgcagcctcagatggggagcgtgaagagctaatggtaattgatgggggaccttatggc
actggacagaggcgtgtaggaaggagccactcggtgagatctcagtcaggcaatgacaaa
aatgtcaatcgcagccagtcctttgcagtgcgccccagaaagaagggtccccctccacca
ccacctaaacgctccagttctgccatctctgggaccaatctcggagatggattgtctgct
gatgaagcagggggtgaaaattaccgcgaacagaggagagctagtgactttggaggagta
gttgacactgaaagtgctggcagtgtaagaagcattgcagccatgttggaactttcatct
attggtggtgggccaagggcactttctgggcaaaggccaagagggtctgacggcatttgt
gcccaccttctgccccatccaggaagccctgagcttcagcgagttccaggaattgtgatt
ggattaaagcatcgcgaggcaatagggttggatggtgaggtggtaaatcgcagaaggacc
atcagtgggccagtgactggacttgtaactgcgtctagaagggagcgtactgagccgcca
aaatccccagactccccacgcagtccctctgaggggatcccctttgcagaagaacgtaaa
cagactgttaaatatcgagctcggccatccaggacggaacatatagactcaataggctct
ggtgttagcaagcaaacagacctatcatctgttgagtccagtgtgacgctgaaacggagg
gtgagggccaggcagagccaacactctggagatgttaaattcctgctcaccgaatcagat
acagtcaagcgccggccgaagcctcgagacaaagacagtgggataggaggggtcgaaccg
ttgacagtttttcagaatggcacaggtaccctgaagcgccgtcccgtctcagagatgagt
tcaggagggaggcaggacagcacagaacacatagcacacaccccagagcgcagcatcaaa
cccccagtctcacccaaacccaccatcatacaggcaactggaaaaagtcaccctccttgt
acccccacagctgcaaagaagatccctggacctcttggagatttaaagaagggcataccc
cctccagtctccccaaaacctacacctcccccaacagcccccaaacctaccaaaccccat
gcggtcattcagtcatccagtgcaagctcaactccggccccctctccggtcaagcagccc
aacagcatcaagccgtcgagcactccgccatctctctgctccagccctgccaaacccctt
agtccaggtcaccccttacaggtgcccatcaagccccccagactgtctataagcagctct
tccgtagagggagggagcagtgaggctgcacaacagaagctggaagagaccagtgcttcc
ttagctgctgcgctacaggccgtggaggaaaagattaagcaagaagatgcacagaaagct
tcttccatggaagagaagagcacagtcagtatcctggacgacataggtagcatgtttgat
gacctcgcagaccagctggacgccatgttggagtga
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integrated database retrieval system
