Xenopus tropicalis (tropical clawed frog): 100493938
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Entry
100493938 CDS
T01011
Symbol
pcdh11x
Name
(RefSeq) protocadherin-11 X-linked isoform X3
KO
K16498
protocadherin delta 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100493938 (pcdh11x)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100493938 (pcdh11x)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100493938 (pcdh11x)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100493938 (pcdh11x)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Protocadherins
100493938 (pcdh11x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
RibLong
Y_Y_Y
He_PIG
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
100493938
NCBI-ProteinID:
XP_002936245
Xenbase:
XB-GENE-6085670
UniProt:
A0A6I8RQ72
LinkDB
All DBs
Position
8:complement(60468850..61266701)
Genome browser
AA seq
1009 aa
AA seq
DB search
MDLLSGTYLLAVLIACIVFESGAQEKNYIVREELPENVLIGNLLKDLNLTLDPDLSTPLQ
FKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRL
VKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQ
NVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDV
NDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAI
DNNTGLITVKEPLDREESPYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYIIN
PVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETAA
PLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPG
TELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIA
KDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGEN
AVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIF
VEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRG
LFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSY
IQELVRKSKETAVGEDFRDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPR
HKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKNLLLNFVTIEESKSEDPAHEHINGT
LDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVI
QELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGPIHTRQL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggacttactgtctggaacataccttttggcagttttaatagcctgtatagtatttgag
tctggtgctcaggagaagaattatatagtacgggaagaactgccagaaaacgtactcatt
ggaaacttactaaaagacctcaaccttactttagaccctgatctgtcaacccctcttcaa
ttcaagctggtatataagactggtgatgttccattaattcgtgttgaagagaacactggt
gaaatcttcactacttcaaatcgaatagaccgggaaaaactttgttctggaattttcaca
gaaaacaaatgcttttatgaggtggaagtggcagttctacctgatgaggtctttagatta
gttaagatccgtttcttaattgaggatatcaatgataattcccctctcttcccatcgaca
gttatcaatatctccattccagagaacactgccgtcaattccagatactctgttccatct
gccattgatccagatgtgggtgtgaatgggattcaacattatgagctccttaagggccaa
aatgtgtttggacttgatgtcattgaaacaccagaaggggacaaatggccacagcttatt
gtgcagcagagcttggacagagagcagaaagacacttacgtcatgaagatcaaagttgag
gatggtggaaatccggcaagatccagtacagcaattttgcaagtaactgttactgatgtc
aatgacaaccggcctgtattcaaggagaaagacattgaggtgaatattccagaagatgct
gcagtgggaacctccgtgacacaactccatgctacagatgctgatctgggctctaatgca
aaaattcatttttacttcgggaatcagatcaccaaccttgccaaaaggcattttgctata
gataataacacaggattaattactgtcaaagagccccttgatagggaggagtctccctac
cataaactgactgtgttggcaagtgatggcagttcaactccatccagagctactgtaacc
ataaatattactgacataaatgataacattccatcaatcgatacaaggtacattataaat
ccagtgaatggcacggtgcagctatctgaaaaagctccacttaatacaaaaatagcccta
ataactgtaactgacaaggatgctgatctgaatggcaaagtgacatgttttacggatcac
gatgttccgttcaggttaaagccagtatttgacaatcaattcttgttagagacagcagcg
ccgctagattatgagagtactcgagaatatgcaatcaaaattgtcgcttcagactctggg
aaaccgccactaaatcagtcagcaatgctcctgattaaaataaaggatgagaatgacaat
gctcctgtttttacattaccaatgattggattgtcctttgtggaaaacaatcctcctgga
acagaattgaccaaaatcagtgctactgatgcagacagtgggcgcaatgcagagctaagc
tacatgctgggacccaatgcacccacaattttcaatttggatcggaggacaggaattctc
acagcggtaaggaaactggacagggaaaagcaagacagatacacatttacagtaattgca
aaggataacgggaacccttccttacagaccaatactactgtcaccttgtctgttcttgac
caaaatgacaacagcccctcattcactcataatgaatataacttttatgtccctgaaaac
cttcctatgtatggcacggtgggactcatcacggtgaccgatgccgactcaggggaaaat
gcagttgtcacactctctcttgttaatgccagagataattttatcatcgatcctctaacc
ggtgtcatcagaccaaatattacctttgatagagagcaacaaggttcatacacttttcaa
gtcaaagctttagataaaggcagcccgcaaaagtcctctactgtaaaagtaaccatattt
gttgaagatgtcaatgataacaagccagtatttgtcatcccttcaaataattattcatat
gatttagtgcaaacatcaacaagcccaggatctgtagtggcaagggtctatgcgattgac
aatgacacaggcatcaatgctgacctgcgttacagcattataggaggaaactcaagaggc
ttgtttgcaattggggaaagaagtgggaatattaccttgaaagaaaagttgcttgctggg
gaccatggcgtattatacaaactggttataaaagtaaacgattcgggaaagccggaacca
tttcacacgattgcttttgtgcatttatttgtaaatgaaacaattactaatggatcttac
atacaggagcttgtgagaaaaagtaaggaaactgctgtcggtgaggattttagagacggg
gaaataacacctcagaccaatgactatgttaagataatcattgctattattgctggcaca
atgacagtaatccttgtcatttttgtcactgctctggtacgctgtcgccagactccaagg
cacaaagtggttcaaaaaagtaagcagagtggagaatgggtttctcctaaccaagaaaac
agacagatcaagaaaaagaagaagaagaagaagcgttcccctaaaaacctgcttcttaat
tttgtcacaattgaagaatccaagtcagaggaccctgcacatgagcatattaatggcact
ttggacattcctgtggagttagaagaacagactatggggaagtataattgggccaccaca
ccaactactttcaagccagatagcccagatttagccaagcactacaagtctgcttcaccg
caacctacattccagattaaacctgagacacccgttcctcctaagaagcatcatgtcatc
caagagctgcctcttgataacacatttgtagttggctgtgactcattgtctaagtgttcc
tcaagcagctcggacccttatagtgtctcggaatgcagctgtcaaggaggcttcaaggca
cctggtcccattcacacaagacagctctga
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