Xenopus tropicalis (tropical clawed frog): 100494050
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Entry
100494050 CDS
T01011
Symbol
itga7
Name
(RefSeq) integrin alpha-7 isoform X2
KO
K06583
integrin alpha 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100494050 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100494050 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100494050 (itga7)
04810 Regulation of actin cytoskeleton
100494050 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100494050 (itga7)
04515 Cell adhesion molecules [BR:
xtr04515
]
100494050 (itga7)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100494050 (itga7)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
100494050 (itga7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
LYRIC
Motif
Other DBs
NCBI-GeneID:
100494050
NCBI-ProteinID:
XP_004911922
Xenbase:
XB-GENE-985232
UniProt:
A0A8J0R0S8
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All DBs
Position
2:complement(136992806..137074434)
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AA seq
1111 aa
AA seq
DB search
MPAELGAPLCFSCLLLLAVLRIHAFNLDVTNTLTKDGEKDSLFGFSVALHRQLNPDPVSW
LLVGAPQASALPNQNANRTGGLYGCPLTTEPKDCIRLDIDHAADTSQESKENQWLGVTVK
SQGPGGKIVTCAHLYESRQRVNQLSETRDVIGRCFVLSEDLTISDDLDGGEWKFCEGRTL
GHEMFGFCQQGISAGFTTDNHYIMFGAPGTYNWKGELRVELFNQSALALGTYDDGPYEVA
GEKSQKPEMIPVPHHSYFGFSVDSGWGVTGRNTLSFVSGAPRANHTGAVVILRRDNGSQL
IPEVTLWGETLASSFGYSVAIEDLNNDGWMDLLVGAPNFFSRKDEIGGAVYVYMNQAGKL
DKSPPLRLNGSEGSMFGIAIGSLGDINQDGFKDVAIGAPFDGNGKVYIHHGSPKGLVTKP
AQILDGISVGIKTFGYSLSGGLDIDGNSYPDLLVGSLSDTVVLFRSRTVIHVLKEITFTP
QNIDLENQNCKHGTGICVELRACFSYSAVPASYNPQITLKCVFEAEADRRLQGKSSRVIF
LKRHSSDSESQHTSTVELHKQSASHCTTAKFQLQEDIKDKLRPIPVTLTYNIHDAHLRGH
SSGDLLPPLMPVLSDVERNVYTTEVNFLKEGCGEDKICQSNLQLSYTFCSRVGNTNQFVP
LPVENEVPVFSLTDQKDLAIKITVTNLPSDPENAMLDGDDAHEAQLSAVFPDTLSYSGVR
QATDSSGASPDKEIVCISNVNASEATCELGNPMKRNAEITFYLIVSTPGITIETTDLEVK
LELATISEQPNLPKVQARAKVILELPLSVSGVATPNRLYYSGEVKGESAMRTEEDAGSPI
DIEVTVSSIGKSLRTLGSAFLNLMWPHEMMNGKWLLYPMAIQLKEKEQSNRSMECTPMKA
INPLKLNTVARAASTVQTDHTPSSASRWSLTYPEKKKDIILDCSRGTARCVVFQCPLYSF
DQQVVLKVHGRLWNSSLLEEYPSVSSLELVVRANITVKSSIKNLVLRDATTQINVMLYSD
YGVAALGGIPWWIILIAVLAGILLLALLVFILWKCGFFKRKRLQEEKLPQHHAVKIPREE
RPMVREEKTGTIKKKDWVTNWSEDGTVQNSS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggaactgggtgctcccctctgcttctcctgcctgttactgctcgctgtgctc
aggatccatgccttcaatctggatgtcaccaacacactgaccaaggatggggaaaaggac
agcttatttggcttctcagtggcccttcacagacaactaaatcctgaccctgtgagctgg
cttttggttggagctcctcaggcctcagcattaccaaatcaaaatgccaaccgtacaggg
ggtctctatggatgtccgcttactacagagccaaaggactgtatccgacttgatattgac
catgcagctgatacatctcaggagagcaaggaaaaccaatggcttggagtcacagtaaag
agccaaggccctggtggaaaaattgtgacatgtgcgcacttgtatgaatctcgccagaga
gtaaaccagctttctgagacccgggacgtgattggccgatgctttgttttgagtgaagat
ttaaccataagtgatgacctagatggaggagagtggaagttctgtgagggtagaacattg
ggacatgagatgtttggattctgccagcaaggcatttctgcaggtttcaccactgacaat
cattatatcatgtttggggccccaggcacatacaactggaaaggggagctccgggtggag
ttatttaatcagagtgccctggccctaggcacttatgatgacggcccatatgaagttgct
ggagagaaaagccagaaaccagaaatgataccagtaccacaccacagttattttggtttc
tcagtcgactcagggtggggggtaactgggcggaacacactgagctttgtaagcggggcg
ccccgggcaaatcatacaggtgctgtggttattcttcgtcgggacaatggaagccagctc
atcccagaagtgactttatggggagagaccctggcatcatcatttgggtactcagttgcc
attgaggatctcaataatgatggatggatggatttgcttgtgggtgcccctaatttcttc
tcacggaaagatgagatcggtggcgctgtttacgtttatatgaatcaggctggaaaactg
gataaatcaccccccctccgacttaatgggtctgaagggtctatgtttggaattgccatt
ggcagcttgggagacattaaccaggatggtttcaaagatgttgccattggagccccattt
gatggaaatggaaaggtttatattcatcatggcagccccaaaggattagttaccaaaccg
gcacagattctggatggtataagtgttggaataaagacttttggatactccctgtctggg
ggattagatattgatggaaactcctatcctgatcttttggtgggatctctttctgacacc
gtagtgctgtttcggtcacgcactgtcattcatgtcctgaaggaaatcactttcactcca
caaaatattgacttagagaatcagaattgcaagcatggcactggaatctgtgtggaacta
agagcgtgtttcagttacagcgctgtccctgccagttataaccctcaaatcactcttaaa
tgtgtctttgaggctgaagcagacaggagacttcaaggaaagtcaagtcgagtgattttc
ctaaagcgccattctagtgactcagaatcccaacatactagcaccgtggagctgcacaag
caatctgccagccactgtacaactgccaaattccagctacaggaagatataaaagacaag
cttcggcccattccagtgacactgacctacaacatacatgacgcacatctcaggggtcat
tcatctggggacctattaccccccctcatgccagttctgagtgatgtggaaagaaacgtc
tataccacagaggttaatttcctcaaagaaggctgtggagaagacaagatctgtcagagt
aacctgcagctcagctataccttctgttcccgtgttggcaacactaaccagtttgtgcca
ctgccagtagaaaatgaggttccagtgttttctctgaccgaccagaaggaccttgccatt
aagattactgtcactaacttgccatcagaccccgagaatgcaatgttggatggagacgat
gcccatgaagcacagctgagtgcggtctttccagatacactgtcctactctggtgtgcgg
caagccactgacagctcaggcgcatctccggacaaggaaatagtctgcatttccaatgtg
aatgcttctgaggcaacatgtgaactcggaaaccctatgaagcggaatgctgagataact
ttttacctgatagtcagcacccctggaattactatagagactacagatttggaggtgaaa
cttgaactggccacgataagtgagcagcccaacttgccaaaagtacaggccagagccaag
gtgatccttgaacttccattgtctgtgtctggggtggcaactccaaacagactgtattac
agtggggaggtgaaaggtgaatcggccatgcgcacagaggaagatgcgggcagcccgata
gatattgaagtgacagtctccagtatagggaaatccttacgcaccctgggttctgccttc
ctgaacctcatgtggcctcatgaaatgatgaatggaaagtggcttctgtacccaatggca
atccagctgaaggaaaaggagcagtctaatcgcagcatggaatgtacccctatgaaagcc
atcaatcccctaaaactgaacacagtggcaagagctgcaagtacagtacagacggatcat
acgccgagttctgctagtcggtggtctctaacgtaccctgaaaagaaaaaggacatcatt
ctggattgttctcgaggtactgcccgctgtgtcgtcttccagtgcccactctatagcttt
gaccagcaggtggtgctaaaagtccatgggcgtctctggaacagcagtttattggaggaa
tacccatctgttagttccttggaattggttgtcagagcaaacattactgtaaaatcctct
atcaagaacctggttctgagagatgccaccacacagattaatgtgatgctgtattcagac
tatggagtggctgctcttggaggcataccctggtggattatccttattgcagtgctggct
ggaatactgctgctcgctcttcttgttttcatcttatggaagtgtggctttttcaagagg
aaacgccttcaagaagagaagctgccacagcaccatgccgtgaagatcccaagggaagag
agaccaatggtgcgggaggagaagacagggaccattaagaaaaaagactgggtgacaaac
tggagtgaagatggcacagtgcagaactcctcataa
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