Xenopus tropicalis (tropical clawed frog): 100494092
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Entry
100494092 CDS
T01011
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100494092 (tmc3)
03037 Cilium and associated proteins [BR:
xtr03037
]
100494092 (tmc3)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
100494092 (tmc3)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
100494092 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100494092
NCBI-ProteinID:
XP_012814975
Xenbase:
XB-GENE-981378
UniProt:
A0A8J0SHZ9
LinkDB
All DBs
Position
3:106622939..106658059
Genome browser
AA seq
1102 aa
AA seq
DB search
MTSVSGSAALKPSKSMKRYKSVRRKASIYRVPPHSNSDEDDDDADGKEENNDPETIFQNI
QIQKEIVANIRCRPWAMRQKLRSLRQAKEIVLKYEGRLTRTRGYQAAGAELWRKLLRVLY
NFAVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVIPEILAGAPF
GSTVNKKIPDKEFSSAQDLNTIWSLGGYLQYSVLFYGYYGRERKIGRAGYRLPLAYFLVG
MAVFAYSFITLLRKMAKNSRLSMASASDENYTFCWKIFCAWDYLIGNPEASESKTAAIVN
SIREAILEEQEKHRSKNLAVTISLRILANILVLLSLAGSIYIIYFVVDRSQKLERTKIEL
SLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVNSMSNSTNDTSTGLAPLYATAAFTMSSTAAPDWDLNRTSTLALDMDLNITNMAKSM
SPVNWTSPVASVTLVAKNECWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLIVRYLSD
CCCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVFKLIGLMYLRSWA
VLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYKPSVNCGPFSGQEKIYD
IISETIKTDFPAWFNKVMSYVSSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRTQLQ
TERIEDKKKVFQMAIARLQNKDGCEKKTEPDSDIISQESSARSSTPRKNGSVVNFESPVS
KGSRIQTISQSASRVDVPQAESLIHSPSISGMPKQRTEHVSTRPSSIKQSGVRDVDRTNY
KPILHKKQDHNVFSEPLFRKGIKQSSPDHHGAGAPSFVAKRPPTRYFIVNEQDSRMKLCS
TSKLPRHFRMEESGDIVELYPRNIRRYVVQHPRRPYSPYLSEDEEDDLHRVLMRKSNRPH
SMSDLRHPPRFYIGDRTDNQMLSGRDVAKMQYKSWEGSFLDGEKLHNRKKIHHKNIDLAE
HFVERHRKVKSKHKLEPCLTESDSVSNTSSSDQQNSSTDQYIQVIHNKDKFIKNSGKLTR
KKAKTTVDLNGSPLNDLICSNV
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgtgagtggatctgctgcactgaagccttccaagtcaatgaaaaggtataaa
agtgtcaggaggaaagccagcatctacagagttccacctcacagcaactcggatgaagat
gatgacgatgcagatggcaaggaagaaaataatgaccctgaaactatcttccagaatata
cagattcagaaagaaattgtggcaaatatcaggtgcagaccctgggcaatgagacaaaag
ctacgctcgctcagacaagctaaagaaattgtcttaaagtacgaagggagattaacgaga
actcgggggtaccaagcggctggagcagagctttggagaaaacttcttcgggttttatat
aactttgctgtcctttttattccttgggaaatgaggataaagaagatagagagccacttt
ggatctggggttgcctcttactttatatttttgagatggctttttgggataaacattgtc
cttacaatcatgactggggcatttgttgttattcctgagatccttgctggtgcccccttt
ggaagcactgtcaacaagaaaattccagataaggaattttcgtcagcccaggatctcaac
accatctggtcactggggggttacctgcaatactctgttttattttatggctattatggg
cgcgaaagaaaaatagggagagccgggtaccgccttccactggcgtattttcttgttgga
atggctgtctttgcctacagtttcatcacacttttaagaaagatggccaagaactctaga
ttgagcatggcaagtgcctcagatgagaactataccttctgctggaaaatcttctgtgct
tgggattatctcattgggaatccagaggcatctgagagcaagacagctgcaatagtcaac
agcattcgagaagcaattttagaagaacaagagaaacatagaagtaaaaatctagcggtt
acaataagcctcaggattctcgcaaatatcctcgttctcctctctctggctggcagtatt
tacattatttattttgtggtggacagatcccaaaagttggaaagaacaaaaatagaactg
agtctctgggaaaaaaatgaggtaagcgttgttgtctctttaatcactatgattgcccct
tctgcctttgagcttgtggctgccttagagatgtatcacccaaggactactttacgattt
cagctggcaagggtgcttgtgttatatcttggtaatctctacagcttaataattgccctg
ctggacaaagtgaacagcatgagtaacagtacaaatgacacctccacaggcttggcccct
ctctatgccacagctgcattcaccatgtcatctacagctgctcctgactgggacctgaac
agaacctcaacccttgctttagatatggatctgaacataacaaacatggcaaaatcaatg
tcaccagtcaactggacatcccctgttgcctcagtcacccttgttgccaaaaatgagtgt
tgggaaacctatgttggacaggaaatgctgaagttatcaattatcgacatgatctttaca
gtagcgagtatactccttattgatttctttcggggacttattgtgaggtatttgagtgat
tgctgttgctgggatctggagagcaaatttccagaatatggggaattcaaaattgctgaa
aatgtcctgcatctcgtctacaatcaaggaatgatttggatgggtgcttttttttccccg
tgccttccagcattcaatgttttcaaattgatagggttgatgtatttgagaagctgggca
gtactgacatgcaatgttccacatcagcaagttttcagagcatcaagatcgaataacttt
tatttggctatgttattgttcatgctgttcctgtgtatgctgccaacagtcttcgctata
gtaagatataagccatctgtaaactgtggaccatttagtggacaagagaagatttatgat
attatttcagagaccataaagacagattttccagcatggtttaacaaagttatgagttat
gtcagcagcccagttgtggtccttcctgcattactgcttctttttatgttaatttactac
cttcagagtattgcaagatcactgaaattcactaacaatcagctaagaacacagctacaa
accgaaagaattgaggacaaaaagaaagttttccaaatggctatagcccgactccagaat
aaagatggatgtgaaaaaaaaacagaaccagacagcgatataatcagtcaggagtcatct
gcacgttcatcaaccccaagaaagaatggcagcgtggtgaattttgaatcccctgtgagc
aaaggcagtaggatacagacaatttcacagtcagcatcacgtgtggatgttcctcaagca
gaaagtctaattcatagtccttctatatctggtatgccaaaacaaagaacagagcatgtt
tcaaccaggccctcaagtatcaagcagagtggagtccgtgatgttgatcgcacaaactac
aaaccaatattacataaaaagcaagatcacaatgttttctctgagccgctgttcagaaaa
ggaataaagcaaagtagccctgatcatcatggagccggagcaccaagttttgtagccaaa
aggccccccacaagatattttattgtcaatgaacaagattctcgcatgaagctttgttca
acttcaaagttaccaagacatttcagaatggaagagtctggagacattgtggagctatac
ccaaggaatatcagaagatatgttgttcaacacccccgtcgaccttactcaccttattta
agtgaggatgaagaagatgacttgcacagggttctaatgcgtaagtctaataggcctcat
tcaatgtcagatcttagacatccacctcgattctatattggggatcgtacagacaatcag
atgttatctggcagagatgtagctaaaatgcaatataaatcatgggaaggcagcttcctt
gatggagaaaaactacataatcgcaaaaagatacatcataaaaacatagaccttgctgag
cactttgtggaacgccaccgaaaagtaaaatcaaaacacaagcttgaaccatgcctaact
gagtccgattctgtctccaatacatccagtagtgatcaacaaaacagcagcacagatcag
tacatacaggttatccataataaagacaaatttataaaaaacagtggaaagctaactcga
aagaaggcaaaaactactgttgacttaaatggttccccactgaatgatctgatttgttca
aatgtctaa
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