Xenopus tropicalis (tropical clawed frog): 100494213
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Entry
100494213 CDS
T01011
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100494213 (brat1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100494213 (brat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
RTP1_C1
TPR_DOCK
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
100494213
NCBI-ProteinID:
XP_002932270
Xenbase:
XB-GENE-981306
UniProt:
F6VIU7
LinkDB
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Position
9:31739848..31759712
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AA seq
824 aa
AA seq
DB search
MDAECSQLLPHVCGVLVDNRQLMTDSSCFEKLLDWFTQMLNTVSAEQLLEENQCILMLFQ
HVLNAGDPDPNLLSFSMRLVGMLAGHETGFKYLMMKNIVQRMFGKYIYTNELWRDASVRR
AWIQGLLSMVQHKQAVFFLSESAIIEVMLNLQMDSSLFVASASNQLVAHTFLVCLKMEQE
NSESKEIPNWPESAQTILTFLEKSLMSGISFSVTQAIKVLTLFYKGCTDTLAAILWSRIV
VAVNSLLDQKTVQSAKHLEELLLCVARFPAFSDPESDLWTLIKHALKNLNPLQSGSLALG
ILKLEHCPQSVNLQAMCVLLHPLDCVLKASVSCGQPGMLDELVSDPAEVDNFLSTKASCV
TLLCQCLCHLHQLCHMGSLIKIPHESVLNCVVTVLQFCIGQAAGASSAGSSLCRFLIGCL
RVQRSAMDTLGSLALWPLTQDSLLKIYNVLLAYLENPESDPTVLKKSLQASLKWLQVSLV
STDSEHWHCSCRFLQDVFPVLKKRMCSPSWEIRDSTLEFLALLIDSVNEKGLFQKVFRTS
GVSQLVLELLKDPESYVRASAVSCLGKIVAITLLYPTLCEENWLPINTEDIASHLLDILS
QDTESFPRRAAVKVFTDWLKQGHMQHFKDPKQMLSKILEVTCNDLDWEVKVNALDLADVF
LDQTLAICNFSGCPYTVGLHCNNSSYAVTEAIQKCDEVGLFQFLLSSLCDCDRPVALKSC
DMLCALKEKLRVGESATEYVPSELHDTDWIESILKERCVKDHKSYNGVAQDANWFTDILK
KVDLVGLKTSLSKGSGHMHETPQSLLYDIKATLWSLEEHDADCY
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagtgctcccagctactgccccatgtgtgtggggtacttgttgacaacagg
caacttatgacagatagctcctgctttgagaaactgttggactggtttacgcaaatgctt
aacacagtttcagcggagcaactgctggaagagaatcaatgcatcttgatgctttttcag
catgtcttgaatgccggtgatcctgatccaaatcttcttagtttttccatgcgccttgtg
ggaatgcttgcaggccatgaaacaggctttaagtatctgatgatgaagaatattgtgcaa
cgtatgtttggtaaatatatctatacaaatgagctatggagagatgcatcagtaagaagg
gcctggatccaaggactgctcagcatggttcagcataagcaggctgttttctttttatca
gaatcggcaattatagaggtgatgttaaatctacaaatggactccagcctttttgttgct
tctgcatccaaccaacttgtagctcacacgtttctagtttgtctgaagatggaacaagaa
aactccgaaagcaaagagattcctaattggccagaaagtgctcaaacaatattaacattc
ttggagaagtcactgatgtctgggatttctttttctgtaactcaggcaatcaaagttctt
actttattttataagggttgcacagataccttggctgctattttgtggtcacgtatagta
gtagcagtgaattctcttctggaccagaaaacagttcaaagtgctaagcatcttgaagaa
cttcttctttgtgtggccaggtttcctgcctttagtgatccagaaagtgacctttggact
ctgataaagcatgccctgaaaaacttaaatcccttacagtcaggctccttagcactggga
atcctaaagttagaacactgccctcagtcagtcaatctgcaagcaatgtgtgtgcttctt
catccactcgactgtgtgttaaaagcatctgtctcctgtggtcagccaggtatgcttgat
gaattggtgtctgatcctgctgaagtcgacaattttttatctaccaaggcttcctgtgtg
actctgctctgccagtgtctgtgccatctccaccagctctgccatatgggttcacttata
aaaataccccatgaatctgtgctaaactgtgtagtcacagtgttacagttctgcattggt
caagcagctggggcttcatctgcaggatccagcctttgcagatttttgatagggtgcctc
agggtacaaagatcagcaatggatacccttgggtcacttgcactttggccactgacccag
gattccttgctgaaaatatacaatgtattgcttgcttaccttgagaatccagagtcagac
ccaacggttttgaaaaagagtctccaggcatccttaaaatggctgcaagtctctttagtc
tccacagacagtgaacactggcattgcagctgtaggtttttgcaagatgtgttcccagtt
cttaagaagcgtatgtgcagcccctcatgggaaattcgggattccactttagagttcctt
gcactccttatagactcagtaaatgaaaagggtctatttcagaaagtatttagaacttca
ggagtttcacaacttgttctggagttgctgaaggatcctgagagctatgtacgagcaagt
gcagtatcctgtctgggaaaaatcgtcgctattactctcctttatcctacattgtgtgaa
gaaaattggttaccaattaacactgaggacattgcgtcacatctattggatattttatct
caagacacagagagttttccaagaagagcagcagtaaaggttttcaccgattggcttaaa
cagggtcacatgcagcattttaaggacccaaagcaaatgctttccaagatactggaagtg
acctgcaatgatttagattgggaggttaaagtcaatgctcttgatcttgcagatgtattt
ctggaccaaacacttgctatttgtaatttcagtggttgtccatacacagtaggtctacat
tgtaacaacagcagttacgctgtgactgaagcaatacaaaaatgtgacgaagtcggactc
tttcagtttctactgagtagcctctgtgactgcgataggccagtagcattaaaatcctgt
gatatgctttgtgctttaaaggaaaagctgcgtgtaggagagtctgcaacagaatatgtc
ccatcggagctccatgatacagattggatagaaagtatactaaaagagagatgtgttaaa
gatcacaaaagttataatggtgtggcacaagatgcaaactggtttactgacattttgaag
aaagttgatttggtcggcctaaaaacctctctatcaaagggcagtggccatatgcatgaa
actccgcagtcacttttatacgatatcaaagcaacattgtggagtctggaggaacatgat
gcagattgctactaa
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