Xenopus tropicalis (tropical clawed frog): 100494341
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Entry
100494341 CDS
T01011
Symbol
trpv4l.3
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100494341 (trpv4l.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100494341 (trpv4l.3)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100494341 (trpv4l.3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
100494341
NCBI-ProteinID:
XP_031760465
Xenbase:
XB-GENE-22066254
UniProt:
A0A8J1JTV5
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Position
6:138059959..138092543
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AA seq
836 aa
AA seq
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MEDALQLSPKPNAFVQDSHGNGGSKNNDNVLLSSHQNENETGTGPSGSPMLYKPLILMEP
IPMYKIDVPMDYSFEKPPSRPTEYSHECSRLNATCPGLPPTIINFDRKLLFDIVSRDSTA
ELVGLLPFLLQKKKRLTDKEFLEIPTGKTCLCKALMSLKDGENNTIPILLDIANMTGDLK
EFMNLPFIDKYYKGQTALHIAIERRCKDYVELLVQNGADVHAQAKGSFFQPKDEGGYFYF
GELPLSLAACTNQPDIVDYLTENVYSKADLCRQDSRGNTVLHALVAIADNSPENTKFVTE
MYDLLIIKYAKLCAKRSSETVPNNNMAATPERTEKTQEALSLEDISNMKEMTPLMMAAKL
GKIGIFQHIIQREIKDEEACHLSRKFQGWKYGPVYSSLYDMSMLDSVLETLVYKSTAENR
HEMLAVEPINEILKDKWKKFGAVSFFLGFLAYVSMMIVFTLVAYYQPMKGKPPYPYRTTT
DRLRLVGEIIILLTGIVFFIGNIIDVIKRLKSRFTVGCFPLLYLIYSVLVLLTMALYLAG
IEAYLAVMVIALVMGWINALYFTRGLKLTGMYNIMLQKVISISEPFNYILFLNCSLFLCF
SWSYAVKTLQSFFPSALLSLLNPCTNEGICNNGQENCTVPENPFCRHSTTFGKLLLDLFT
LTIGMGDLEMFSHAKYPAVFIILLVTYLIITFILLLNMLIALMGETVGEVSKESKQIWQL
QWAITILNAEKHLPAFMKKSSGEMVPVGKKLNGDPDERWCFRIDEVNWSHWKRDVGIINE
DPGRSDLQKDQTALGELEAAQTSEETLVLLEEDRQAQTDKRRNKKQKSPRSQNIAP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgccttgcaactctcccctaaacctaatgcctttgtgcaggattcccatggg
aatggtggatctaaaaataatgacaatgtcctgttatcatctcaccaaaatgaaaatgag
acaggtacaggccccagtgggtccccaatgctgtataaaccattaatactcatggagcca
atacccatgtacaaaatagatgtacctatggactattcttttgaaaaaccaccctctcgc
cctacggaatacagtcatgagtgttctaggctcaacgccacatgtcctggcctccccccc
accataataaattttgataggaaactccttttcgatattgtctcaagagacagcactgca
gaactggtgggactcctgcctttcttgttgcagaagaagaagcggctgacagataaggaa
tttctagaaattcctacagggaagacttgtttgtgtaaagctctgatgagcctgaaagat
ggcgaaaataacaccatcccaattctactcgacattgctaatatgacaggcgatctgaag
gaatttatgaatttaccgttcatagataagtattataaaggccaaaccgctctgcacata
gccattgagaggcgctgtaaggattatgtggagttgctggtacagaatggggctgatgtt
catgctcaggccaaagggagtttctttcaacccaaggatgaagggggatacttctacttt
ggtgaacttcccctgtcccttgccgcttgcaccaaccagcctgatattgtggactatttg
acagagaatgtttatagtaaggcagatttatgtcgtcaggattcccgtggtaatacagtt
ctgcacgccttggtcgctattgcagacaattcaccggaaaacaccaaatttgtcactgag
atgtatgacttattgatcattaaatatgcaaagttgtgtgctaaacgtagttccgagacc
gtccctaataacaacatggcagccacaccggaaagaacagagaagacgcaggaagctctg
agcttggaagatatttccaacatgaaagaaatgacacctctcatgatggcagctaaactg
ggaaaaatagggatattccagcacatcatccaacgtgaaataaaagatgaagaagcttgt
cacctctcacggaagttccagggttggaaatatggccctgtgtattcttcactttatgac
atgtctatgttggattcagtactggaaaccctggtttataagagtacagctgagaaccgc
catgagatgctggcagtggagcccataaatgaaatattaaaagacaagtggaagaagttt
ggtgctgtttctttcttccttggtttccttgcctacgtcagtatgatgatcgtcttcaca
ttagttgcatattaccaacccatgaagggcaagcccccttacccttacagaacaacaacg
gatcgcttgaggcttgtaggagagatcattattctgctgactgggatagtcttctttatt
ggcaatataatcgacgtaataaagaggctaaagtctcggtttactgttggatgtttcccg
ctgctttacttgatctactctgtgctggtccttctcacaatggctctgtaccttgctggt
attgaagcttacctggccgttatggtgattgccttggttatgggctggataaatgcttta
tactttacaagaggcttgaagctcactgggatgtacaacattatgcttcagaaggtcata
tctatctcagaaccttttaattatattttatttcttaattgttctttattcctttgtttt
agttggtcgtatgctgtaaagacactgcaatcttttttcccctcagctttgctatccttg
ctgaatccatgcaccaacgagggaatatgcaataatggacaagaaaactgtactgtccca
gaaaatcctttctgtcgacacagcaccacattcggcaagttactgttagacctctttaca
ctgaccattgggatgggagacctggagatgttcagccatgccaagtaccctgcagtcttc
atcattctgttggtgacatacctcatcatcacctttattctcctccttaacatgttaatc
gctttaatgggagagaccgttggggaggtgtccaaggaaagcaagcagatctggcaactg
cagtgggctatcacaatcctaaatgcagagaagcatcttccagccttcatgaagaaatcc
tctggagaaatggtacctgttggaaagaaactgaatggggatccagatgaacgctggtgt
tttagaattgatgaggtgaactggtcccactggaaacgggatgttggcattattaatgag
gatcctggaaggagtgacttgcagaaagatcagactgctttgggagagcttgaagctgcc
caaacttctgaagagaccttggtgcttcttgaagaagaccgacaagcccagactgataaa
cggagaaataaaaagcagaaaagtccaagatcacagaatattgcaccatag
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