Xenopus tropicalis (tropical clawed frog): 100494491
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Entry
100494491 CDS
T01011
Symbol
rab39a
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100494491 (rab39a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100494491 (rab39a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xtr04031
]
100494491 (rab39a)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
100494491 (rab39a)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
100494491 (rab39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
SRPRB
AAA_16
AAA_5
AAA_18
AAA_22
NACHT
AAA_7
CENP-M
AAA_24
AAA_29
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
100494491
NCBI-ProteinID:
XP_002934692
Xenbase:
XB-GENE-1011717
UniProt:
F7CTE2
LinkDB
All DBs
Position
2:78434253..78444607
Genome browser
AA seq
206 aa
AA seq
DB search
MACAWDFQFRVLLLGDSGVGKTSLLHRYTDGQFTDTTTETVGVDFCCREEEPEPGVKVRL
QFWDTAGQERYRAVTRSYYRNAAGVLLLFDLTTRQSFDNVTEWHMEVTERTQAKPMVFML
LGAKNDLKEKRMVTREEAQRLAENLSAPYLETSARTGSNVSAALSLLCRELLRAARSQAQ
VSTDDSSGAYCTNKEMQKNQEAKCTC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgcttgggattttcagttccgtgtacttctgttgggagactcaggagtgggt
aagacttctctactccatcgttacacggatggccaatttacagacacaacaacagagaca
gtaggagttgatttctgctgccgggaagaggagccagagcctggtgtaaaagtcagactg
cagttctgggacacggcagggcaagagcgatatagagctgtgacacgttcctactacaga
aatgctgccggggttctccttctctttgatcttaccacacggcaatcttttgataatgtc
actgaatggcatatggaggtaactgagcggactcaagccaaaccaatggtgttcatgctg
cttggagcaaagaatgacctgaaggagaagcgaatggtaacccgggaggaggcccagaga
ctagcagaaaatcttagtgctccttatttagagacctctgcccgaacagggagcaatgtg
tctgctgcactttcacttttgtgcagggaactgcttagagctgctcgttcgcaggcccag
gtatcaacagatgacagtagtggggcctattgtacaaacaaagaaatgcagaaaaaccaa
gaagcaaaatgcacatgttga
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integrated database retrieval system
