KEGG   Xenopus tropicalis (tropical clawed frog): 100494492
Entry
100494492         CDS       T01011                                 
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
  KO
K05450  platelet derived growth factor C/D
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010  MAPK signaling pathway
xtr04020  Calcium signaling pathway
xtr04510  Focal adhesion
xtr04540  Gap junction
xtr04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100494492 (pdgfc)
   04020 Calcium signaling pathway
    100494492 (pdgfc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100494492 (pdgfc)
   04540 Gap junction
    100494492 (pdgfc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100494492 (pdgfc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100494492 (pdgfc)
Cytokines and neuropeptides [BR:xtr04052]
 Cytokines
  Growth factors (RTK binding)
   100494492 (pdgfc)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 100494492
NCBI-ProteinID: XP_002934792
Xenbase: XB-GENE-985688
UniProt: F7CBF7
LinkDB
Position
1:53551754..53698439
AA seq 347 aa
MILLVLLLRVLTTALDFPLHGVQADSNLSSKFHYGSVKEQNGVQDPQHEKIVSVSFNGSI
HSPRFPHSYPRSTVLVWRLVAKEEHLRIQLTFDEKFGLEDPENDVCKYDFVEIEDPSDGT
ILGRWCGSSTVPSKQISKGNQIRIRFVSDEYLPSEPGFCIHYTLLTPQQAAPASPSVLPP
SALPLDILSETVARFETLEEVIRYLEPDRLHLDIEDLYRPPWQLLGKSYMYGRKNRVVDL
NLLKEEVRLYSCTPRNFSVFLREELKRTDAIFWPSCLLVKRCGGNCACCNHMCSECHCMP
TKVTKKYHEVLQLKQRSGMKTLQKSLADVPLEHHEECACMCKGNTEG
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgatcctcttagtgctactcctcagagtcctaactactgcactggacttcccgctacat
ggggtacaagctgattccaatttgagcagcaagtttcactatggaagtgtcaaggagcaa
aatggagtacaagacccacagcatgagaagattgtttccgtttcattcaatggaagtatt
cacagccctaggttccctcactcttacccacgcagcacagtgctggtatggagactggta
gcaaaggaagaacatttaaggatacagctgacctttgatgaaaagtttgggctggaagac
cctgaaaatgatgtatgcaagtatgattttgtagagattgaagaccccagtgatggcaca
attcttggacgctggtgtggctctagtacagtgccaagcaagcaaatatcaaaagggaat
cagatcagaattcgctttgtatctgatgaatatttaccttcggaaccaggattctgcatc
cattatacacttctcacaccacaacaagcagcacctgcaagtccttcagtcctcccgcct
tcagcattgccattagacatactcagtgagactgttgctcgctttgagactctggaagaa
gtaataagataccttgagccagacagattgcatttggacatagaagatttatacagacca
ccatggcaattacttggaaaatcctacatgtatggcagaaaaaacagagttgtggatctg
aatctgctaaaagaagaagtcagattgtatagctgcacaccaaggaacttttcagtgttt
ttaagggaagaactgaagcggactgatgctattttctggcccagttgcctcttagtgaag
cgctgtggaggaaactgtgcatgctgcaatcatatgtgcagtgagtgccactgtatgcct
actaaagtcaccaaaaagtaccatgaggttcttcagctgaagcaaaggagtgggatgaaa
acactgcaaaaatctttggcagatgtacctttggaacatcatgaagaatgcgcctgtatg
tgcaagggtaacactgaaggataa

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