Xenopus tropicalis (tropical clawed frog): 100494506
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Entry
100494506 CDS
T01011
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 1 isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100494506 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100494506 (slc1a6)
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100494506 (slc1a6)
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
100494506
NCBI-ProteinID:
XP_004911059
Xenbase:
XB-GENE-6033965
UniProt:
A0A6I8SD35
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Position
1:101803027..101833282
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AA seq
600 aa
AA seq
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MVTASLTFAGNSQISPVARASVVIYKKASTNKFHFSEIMSEKDGNADSLFLKEGSAKDLS
QEGRVNNWQHALRKRASRTGKHIQEMTWKRLWGFLRRNAFVILTIAAVILGIVLAFALRP
YKMSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDSKASGKMGLRAVVYYTVT
TFIAVFIGIVMVIIIHPGKGTKENLQSHGKIERVQATDAILDLIRNMFPPNLVEACFKQY
KTQYNTRVYKVQVSTDQNYSIATEQLNISSILENVTQAMGTLQKMVELEEVVPIAGSAGG
VNALGLVVFSMCFGLVIGNMKEQGRALKEFFDCLNEAIMRLVAIIIWYAPIGILFLISGK
ILEMDDLLVMGGQLGMYTITVIVGLLIHAVVVLPLLFFIVTRRNPWPFIGGLLQALITAL
GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNYE
LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRT
TTNVLGDSLGAGIVEHLSRHELKKQDAEMGNSVLEECEKPYQLICTENDIQKHPNCETSM
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagcttcacttactttcgctggaaactcacagatttctccagtagcaagagca
tcagtagtgatctacaaaaaagcctcaactaataagtttcacttttccgaaataatgagt
gagaaagatggcaatgcagacagcctctttctgaaagagggctcagccaaggatttaagc
caagaaggacgtgttaacaattggcaacatgctttgaggaaaagagcatcgcgtacaggc
aagcacattcaggagatgacctggaaaagactctggggattcctcagacggaatgccttt
gtgatactcaccattgcagcagtgattctgggtattgtattggcctttgcattgcgacca
tataaaatgtcctatcgtcagattaaatacttctccttcccgggtgagctgcttatgcgg
atgctgcagatgctggtcctgcccctgattgtgtccagcctggtgacaggaatggcatct
ttggacagcaaggcatcaggcaagatgggattgcgagcagtggtatattatacagtaacc
acattcatcgctgtctttattggcatagtcatggtgatcattatccacccaggaaaaggc
accaaagagaacctacaatcccatggaaaaattgagagagtgcaggcaacagatgctatc
ctggacctaatcaggaatatgtttcctcccaacttagtggaagcttgtttcaaacagtac
aaaacccagtacaatacaagagtgtacaaagtacaagtgtccacagatcagaattacagc
atagctacagaacagctgaatatcagcagtattttggagaatgtgactcaggcaatggga
acactacaaaagatggtggaactggaggaagtggtgccaatcgctggatcagcagggggt
gtgaatgcacttggtcttgtggtcttttccatgtgctttgggctggtgattggcaacatg
aaggaacaaggaagagctcttaaagaattttttgactgtctcaatgaggctataatgagg
cttgtagcaattataatatggtatgcaccaattggtattctgttccttatttctgggaaa
attttggagatggatgatctgttggtgatgggaggtcagctaggcatgtatacaattact
gttattgtaggacttcttatacatgcagtagtagtgcttcccctgctgtttttcattgtc
acgcgaagaaacccatggccatttattggtgggctgctccaggctcttataactgcactc
gggacatcttcaagctctgcaacactccccattacatttaaatgtttggaggagaacaac
ggtgtggacaagcgcgttacaaggtttgtgctgcctgtgggtgccacaattaacatggat
ggaactgcattatatgaggcattggctgcaattttcattgcacaagtcaacaactatgag
ctaaactttggacagatcattactatcagtatcacagctactgcagccagtattggagca
gccggcatccctcaggctggactggttaccatggtgattgtccttacatcagtggggctc
cccacagaggatatcactcttattattgctgtggattggtttctcgaccgtctccgaaca
acaaccaatgtacttggagattctctaggggccggtatcgttgagcatctctccagacat
gaactaaagaagcaagatgctgagatgggtaactctgttctagaggaatgtgagaaacct
taccagctcatctgtactgaaaatgacatccagaagcaccccaactgtgagacatccatg
tga
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