Xenopus tropicalis (tropical clawed frog): 100494581
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Entry
100494581 CDS
T01011
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100494581 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100494581
NCBI-ProteinID:
XP_031759452
Xenbase:
XB-GENE-1018501
UniProt:
A0A8J1JNJ4
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All DBs
Position
6:complement(153207116..153283395)
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AA seq
1986 aa
AA seq
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MHSGICSFVSAFVFCVCCRLDPLSRHAAVQAELEPAPVASCGLGACECCEAVRAGERRPG
AELVWGTRRGTRRGARRDWRREGRCFGLWPLGTRKLPIAPAMLKCIPLWRCNRHVESVDK
RHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVA
NFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVS
LQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNL
RELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLP
SSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNV
DRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFALTN
LNLKALWLAENQSQPMLKFQTEDDEKTGSKVLTCYLLPQQPSPSLENLQNSVDDSWTDGN
LNRVSVIQFQEDPKTEEEDDEAAEERRGLQRRATPHPSELKVMKKVMEGLRGDGNTSKEE
ATCASDEEKRLSGLSSQSAESQRSGSTVSVGFQEELQNRDPEKLPNPVLEEGAAVGDDDM
EVWYTEPTVHFADKTTVLCDDDYEEYDEDRVSPVERRLIRKDTPHYKKHAKITKLPNDEV
VEALLHGFSPRSLSEEEEEEGENNGPIPRFSLPNEEQDDVVAPDKEWEPAGSRDERSNSQ
QNIKGVSFDQVNNLLIEPARIEEEELTLAILRQTGGLGISIAGGKGSTPYKGDDEGIFIS
RVAEEGPAARAGVRVGDKLLEVNGVDLHNAEHHTAVEALRNSGSSVSMTVLRERMVEPEN
PITVTPLRPEDDYNPRERRSVVRYPEEKEEDLQSPCQRITTCLARNDKGLGFSIAGGVGS
TPYRAGETGIFISRIAEGGAAHRDGTLRVGDRVISINGVDMTEARHDQAVALLTSTCPTI
TLLLEREPPQPGGSTDPGASPSLHRARPRSPPPPTDSENGEGEEGGAPLSNHSSQKMEDE
FPIEEIVLVKSGGPLGLSIVGGSDHSSHPFGIREPGVFISKVIPRGLAARSRLRVGDRIL
EASGLDLRHVTHQEAVNALLSSAQELHLLVRRDPPPPGMQEICIVKTPGEKLGISIRGGA
RGHPGNPLDPTDEGVFISKVSSSGAAARDGRLKVGMRILEVNQQSLLGMSHTEAVQALRG
VGDTLLVLVCDGFDPLAVTSAEASPGIIANPFAAGIGRKNSMESISSIDRDMSPEEIDRL
QKEMEMVRETTQWEREDMEKVERMRREREEANKLLEEETKAYSTEPLKLDYKTLAALPAG
GQAKVARLPLGMEAASSCPVPVALVHPVPAVVANGPTLHHPVPPVAPPPPTLLPCPMAEP
GAPGSSPEPEEVLVDCQPILFSENPFIVANKKRAGAGGATLSGPPTGYGSAGLLKTTVYS
KKTPPEDPPAAAAKKEAPCSPSAQQQQAVPPRSGHLSGRETRFASINFLTQAESRPTPPS
LSDDTFPANAKQAYKTYAALPSAHPSLEQQDPGSPRTPDQTSTSAEFSPGGLDSPEQRSF
RERQKYFEMDVKHQAEKLPKRVSLVGEDDLRKMREEEARKIQMKREQLLREEGEAGDASP
RARGPSTPTSVFIEGVEYKIERVDGGSLSSLTGFSPSESQRNSLEDSFRIEQRPSSMSGL
TPVYPGDSAPPVRTVKAEKRLQDRLRMQSPELTEQEKQLSPAERRALQAEKRAMWRAASN
MEDSIKQYELSLARKLYQARQNRSQVPEESDRMKSLEQDALKAQMMIAHSKENRKRSTLD
QLAESPSPAPTPSPTPLEDYSPRLLTSPGRLSHSDKKFDYREFAAIPSSKPVYEIQSPDL
TPNLKCSEDSRTSVTCSLEHVEPPEEEHGEEPAPTANTSALEEMATYSNKRKLRHTRRSL
ETAVPT
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgggatatgtagttttgtctctgcttttgtgttttgtgtctgttgtcgattg
gacccgctttcccggcatgcagcggttcaggccgagctagagcctgcgcctgtcgcgtcc
tgcgggctgggagcttgtgagtgttgtgaggcggtgagagcgggagagagacgcccggga
gcggaacttgtgtggggaacccggagagggacccggagaggagcccggagagactggcgg
cgggaggggcgctgtttcgggctgtggcccctcggtaccaggaaactcccgattgccccc
gccatgctgaagtgcatccccctgtggcgctgcaatcgccatgtggagtcggtggataag
cgccattgctcgctgcaggcggtgcccgaggagatttatcgctacagtcgcagcctggag
gagctgctattggatgccaaccagctgcgtgagctgcccaagcctttctttcgccttctc
aatttgaggaaactgggcctgagtgacaatgagatccagcgcctgcccccggaggtggcc
aacttcatgcaactggtggagctggacatttcccgcaatgacatccccgagatccctgag
agcatcaagttctgcaaatccctggagatcgctgatttcagtgggaaccccctgtccagg
ctgcccgatggcttcacccagctccggagcctggcacaccttgccctcaatgacgtgtcc
ctgcagagcctgcccagcgatatcggaaatttatctaacttggtcacattggaactacgg
gaaaacgtcctgaaatcagtgcccatgtccctctcattcctcgttaaactggagcagttg
gatctgggaagcaacgacctgcaggttctgcctgacacactgggtgccctacccaatctg
cgggagctgtggctggaccggaaccagctctcttccttaccctcggagctggggaacctg
cggcgcttggtgtgcctggacgtgtcggagaacaagctggagcagctgccggcagagatc
agtggcctgatgtccctaacggacctgctgctctcacagaaccagctcagctccctgccc
tccagccttggtcagctcaagcagctgtctatcctcaaggtggatcagaaccgtctgaca
cagttaacggagtctattggcgactgtgagaatctgagtgagatcatcctgaccgagaac
ctgctaacggtgctgcccaaatccatggggaatctcaccaaactgaccaatctcaatgtt
gatcggaaccggctgctctcccttcccagtgaaattgggggctgcgccagtctcaatgtt
ttgtcgctcagagataaccagctcagcgctctgccccccgaactcgccggcgccaccgag
ctgcacgtgctggatgtggcgggtaacaggttgttaaatctcccatttgccctgaccaac
cttaacctgaaagctctgtggttggccgagaaccagtcccagcctatgctcaaattccaa
acggaggatgatgagaaaactggatccaaggtgctaacgtgctacctcctgccccagcag
ccctcccctagcctggaaaacctgcagaacagtgtggatgacagctggacagacgggaac
ctcaatcgggtcagtgtcatacagttccaggaagaccctaaaactgaagaagaggatgac
gaagctgctgaagaaagaaggggcctgcagcgcagagctaccccacaccccagtgagctg
aaggtcatgaagaaagtgatggaggggctcaggggtgacggtaacacctccaaagaggag
gccacatgcgccagcgatgaggagaagcggctcagtggcctctccagtcagagcgccgag
tcccagcgcagcggcagcaccgtgtctgttgggttccaggaggagctgcagaacagggat
ccagaaaagctgccaaacccagtgctggaggaaggggcggcagtgggggatgacgacatg
gaggtgtggtatactgagcccacagtgcactttgcggacaagacgactgttctctgtgat
gatgactatgaggagtacgatgaagatcgggtctccccggtggagcggcggctgatccgt
aaggacacgccccattacaagaagcatgcgaagatcacaaagctgcccaatgatgaggtg
gtggaggccctcctgcatggcttcagccccagaagtctctcagaggaggaggaggaggaa
ggggagaataatgggcccatcccaaggttctcgctgcccaatgaagagcaagatgatgtg
gtggcgccggacaaagagtgggaacctgcagggagcagagacgagcggtcgaactcccag
cagaacatcaagggggtgtcgtttgatcaagtgaataatcttctgattgagcctgctcgg
atagaggaggaagagctcactctcgccatcctgcgccaaactgggggtctgggaatcagc
atcgcagggggcaaaggctctactccctacaagggcgatgatgagggcattttcatatct
cgagtggcagaggaggggcctgcggcccgtgcaggggtgcgagttggggataagctgctg
gaggtgaatggggtagatctgcacaatgcggaacaccacacagcagtggaggcactgagg
aattctgggagctccgtctctatgactgtgctgcgagagcgcatggtggagccggaaaat
cctatcacggtgacccccctgcgcccagaggatgattacaacccacgggaacggcgcagt
gttgtccgctatccagaggaaaaggaggaggatctgcagagcccgtgccaacgtatcacc
acctgcctggcacgcaatgacaaaggcttggggttcagcattgctgggggagtaggcagc
accccctatcgggcaggggaaactggtatcttcatctccagaattgcagaaggcggagct
gctcaccgggacgggactctgcgagtaggagacagggtgatctctatcaacggggtagat
atgacagaagccagacatgatcaggcagtagcgctgcttaccagcacctgccccaccatc
accctgctactggagagagagcccccccagccaggaggcagcacagacccaggggcgtcg
ccttctctgcacagggcccgcccacgctcacctccaccccccaccgacagcgagaatggt
gaaggcgaggaagggggtgctcctctgagtaatcactccagccagaagatggaggatgag
ttccccatagaggaaattgtgttggtgaaatctggggggcctttggggctcagtattgtg
gggggcagtgaccactccagccatccgttcgggatccgtgagcccggagttttcatatcc
aaggttatcccccggggattggccgcccgcagtagactcagggtgggggatcgaattctg
gaggcatctggattggatctaaggcatgtcactcaccaggaagctgtgaatgcccttctc
tctagtgctcaggagctccacctcctggtgaggagggacccgccccccccaggcatgcag
gagatctgcattgtgaagacccccggggagaagcttggcatcagtatccgggggggagcc
cggggccacccaggaaatcccttggatcccaccgacgaaggcgtctttatctccaaggtc
agttcctcaggggcggcggcacgagacggccggctgaaggttggaatgcgcattctggag
gtgaatcagcaaagcctgctgggtatgagccacacggaggcagtgcaggccctgaggggc
gtgggagataccctactggtactcgtgtgcgatggcttcgaccccctggcagtaacctct
gctgaggcatcaccgggtataatagccaatcccttcgctgctggcatagggagaaagaac
agtatggagagtatttcctccattgacagagacatgagcccagaggagatagaccggtta
cagaaggagatggagatggtgcgggagacgacccagtgggagagagaggacatggagaaa
gtggagcggatgcgcagggagcgagaggaggccaacaagctcctcgaagaggagaccaag
gcctatagcacggagcctctgaagctggactacaagaccctggcagcactacccgcgggt
gggcaggccaaggtggcccggctccccctgggaatggaagcagccagctcttgccccgtg
ccggtggcgctggtacaccctgttcctgcagttgtagccaatgggccgaccttgcaccac
cctgttccccccgtggcacctccgccccccaccttgctgccttgccctatggctgagccc
ggggcccctggcagtagcccagagccagaggaggtgctagtggattgtcagcccatcctg
ttcagtgagaacccattcattgtggctaacaagaagcgggcaggggccggcggggctacc
ctgagtgggcctcctaccggctatggcagcgccgggctgttgaagacaactgtctactcc
aagaagactccccccgaggacccccccgctgcagcagccaagaaggaagctccgtgttcc
cccagtgcgcagcagcaacaggccgttccgccccggtccggtcacctctctggcagggag
acccggtttgcctcgattaacttcctgacgcaggcggagagccgaccgactccgccctct
ctcagtgatgacaccttccccgccaacgccaagcaggcatataaaacctacgcggccctc
ccctctgcccaccccagcctggagcaacaggaccctggctctcctcggacccctgaccag
accagcaccagcgctgagttctctcctgggggcttagacagtcccgagcaacgctccttc
cgagagcgccagaagtactttgagatggacgtcaagcatcaggctgagaagcttcccaaa
cgtgtgtctctggtgggggaggacgacctgaggaagatgagggaggaggaagcccggaag
atccagatgaagagagagcagctcctccgggaagagggagaggccggagacgccagcccc
cgtgccaggggccccagcaccccaactagtgtgttcattgagggagttgagtacaagatt
gagagagtggatggaggcagcctctcctctctcactgggttttctccctcggaatctcag
cggaattccctggaagactctttccggattgagcagagacccagctctatgtcagggctg
acccctgtgtatcccggggactcggcccccccagttcgcacagtaaaggcggagaagcgg
ctgcaggatcggctgagaatgcagagccccgagctcaccgagcaggagaagcagctgtcc
cctgcggagcgcagagccctgcaagctgaaaagcgagccatgtggagggccgccagcaat
atggaggacagtattaagcagtatgagctgtctctggccaggaagctgtaccaggcccga
cagaaccggtctcaggtccctgaggaaagcgacaggatgaagtcgctggagcaggatgcg
ctgaaggctcagatgatgatcgcccactccaaggagaacaggaaacgcagcaccctggac
caactggccgaatccccttccccggcacccacgccgtcgcccacaccactggaagattac
agcccccgcctactcacgtctccagggcgactgtctcattcagacaagaagtttgactac
agagaatttgctgctattccgtcttccaaaccggtgtatgagatccagtcccctgacctg
acgccaaacctgaaatgctcagaagattccagaacatcagttacctgtagcttagagcac
gtggagccgccggaggaggagcatggagaagagcccgcccccaccgccaacacatcagca
ctggaggaaatggccacatacagcaacaagcgcaaactgcggcacactaggcggagcttg
gagaccgccgtccccacatag
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integrated database retrieval system
