Xenopus tropicalis (tropical clawed frog): 100494662
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Entry
100494662 CDS
T01011
Symbol
trpv4l.1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100494662 (trpv4l.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100494662 (trpv4l.1)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100494662 (trpv4l.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
100494662
NCBI-ProteinID:
XP_017950397
Xenbase:
XB-GENE-22066240
UniProt:
A0A7D9NJV4
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Position
6:137991087..138019100
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AA seq
1014 aa
AA seq
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MAGPFPKYNAPLDIKDSQENDGSIFRSLPSSYLHPSGSEGSADPSDGNTITPTTSSLLLT
METTFHGVTETHYVREESRNVTTYDEGGTDPSDGTEIPQPRRCEMEMDSRYHKVTERDYG
REEPFKVTPYESLPSSYPNPFISEGGTDPSDGIEIPQTRSCEMEMDSRFHRVTERDYGRE
EPFKVTPYESLPSSYPNPFGSEGGADPSDGTQVIQTNSCEMVMDSRYHKVTERNYGREEP
FKVTPYESLPSSYPNPFGSEGGADPSDGIEIFQTKSCEMVMDSRYHNVTERDYGTEVTPY
DPRRGPYPDYPDIKKLKEHLFDIVSRGSAAELEELRLLPFLLHEKKQLTDEEFLEDSTGK
TCLSKALMHLNNGKNDTIPILIYIATITINVPQFINSPFLKYYDGQTALHIAIERRCKDY
VELLVQNGADVHAQAKGRFFQPKDEGGYFYFGELPLSLAACTNQPDIVDYLTENVYNKAD
LCRRDSRGNTVLHALVAIADNTPENTKFVTEMYDHLVIKCAKLNKESSLETVTNNDKMSP
LMMAAQLGKIDIFQHIIQLEIKDEEARHLSRKFRDWTYGPVYSSLYDLTTLDTYEDGDSV
LEILVYKSTAKNRHEMLAVEPINELLKEKWKKFGAVLFYLSFFAYLFLMIIFTLVAYYRP
MEGTPPYPYRTTTDHLRLVGEIVILLVGIVFFIANIKDLIMKKYPGVYSLFTEGCFQLLN
FIYSVLVLLTAILYLAGIEAYLAVMVIALVLGWINALYFTRGLKLTGMYSVMLQKVLFKD
LFRFLLVYLLFMVGYASALVSLLNPCTNEMICNDGQENCTVPENPSCQHSTTFSRLLLNL
FTLTIGMGDLEVISHAKYPAVFIILLVTYLIITFVLLLNMLIALMGETVGEVSKESKQIW
QLQWATTILDIERYLPAFMRKAFRSGEAVIIGLKQNKEQDERWCFRVDEVNWCHWKQDIA
IINEDPGRCNLQRDRPLVGKHKADQHSEDTMVLLEKDPQAQTHKKNWRNNESQI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacccttcccgaaatataatgcacctttggacattaaagattctcaggagaat
gatggctctatcttcagatcattaccatcatcttatttacacccgtctggaagtgaggga
agtgcagaccccagtgatgggaatacaattacccctaccacgagttcacttctactgaca
atggaaactacctttcatggagtaacagaaacgcactatgtgagagaagagtcgcgtaac
gtaaccacttacgatgagggaggtacagaccccagtgatggaactgaaattccccagccc
aggagatgtgaaatggaaatggactctcgctatcataaagtaacagaaagggactatggg
agagaagagccttttaaagtaaccccttatgaatcattaccatcatcttatccaaacccg
tttataagtgagggaggtacagaccccagcgatgggattgaaattccccagaccaggagc
tgtgaaatggaaatggactctcgctttcatagagtaacagaaagggactatgggagagaa
gagccttttaaagtaaccccttatgaatcattaccatcatcttatccaaacccgtttgga
agtgagggaggtgcagaccccagtgatgggactcaagttatccagaccaacagctgtgaa
atggtaatggactctcgctatcataaagtaacagaaaggaactatgggagagaagagccc
tttaaagtaaccccttatgaatcattaccatcatcttatccaaacccgtttggaagtgag
ggaggagcagaccccagtgatgggattgaaattttccagaccaagagctgtgaaatggta
atggactctcgctatcataatgtaacagaaagggactatggaactgaagtaaccccttat
gatcctaggcggggcccatatcctgattacccagacataaaaaagttgaaagagcatctt
tttgatattgtctcaagaggcagcgcagcagaactggaagaactcagactcctgcctttc
ttattgcatgagaagaaacagctgacggatgaagaatttctagaagactccacaggcaag
acttgtttatccaaagctctaatgcatctgaacaacggcaaaaatgacaccatcccaatc
ctgatctacattgctacaataacaataaatgttccacaatttattaactcacccttctta
aagtattatgatggccaaaccgctctgcacatagccattgagaggcgctgtaaggattat
gttgagttgctggtacaaaatggggctgatgttcatgctcaggccaaagggcgtttcttt
caacccaaggatgaagggggatacttctactttggtgaacttcccctgtcccttgccgct
tgtaccaaccagcctgatattgtggactatttgacagagaatgtttataataaggcagat
ttatgtcgtcgggattcacgtggtaatacagttctgcacgccttggttgctatagcagac
aatacgcctgaaaacaccaaatttgtcactgagatgtatgatcatttggtcattaaatgt
gctaagctgaacaaagagagtagcttggagaccgtcaccaacaatgacaagatgtcacct
ctcatgatggcagcccaattgggaaaaatagatatattccagcacatcatccaacttgaa
ataaaagatgaagaagctcgacacctctcacggaagttccgggattggacatatggccct
gtgtattcttcactttatgacttgactacgctggatacctatgaggatggggattccgta
cttgaaatactggtttataagagtacagctaagaaccgccatgagatgctggcagtggag
cccataaatgaactattaaaagaaaagtggaagaagtttggtgctgttcttttctacctc
agtttttttgcctatctctttctcatgatcatcttcacattagttgcatattaccgaccc
atggaaggcacgcccccttacccttacagaacaacaacggatcacttgaggcttgtagga
gagatcgttattctgctggttgggatagtcttcttcattgccaatataaaagatcttatt
atgaagaagtatcctggggtatattctctatttactgaaggatgcttccagctgcttaat
tttatctactctgtgctggtccttctcacagcgattctgtaccttgctggtattgaagct
tacctggccgttatggtgattgctttggtcttgggctggattaatgcgttatactttaca
agaggcttgaagctcactgggatgtacagcgttatgcttcagaaggtcctgtttaaagat
ttatttcgcttcctgttggtgtacctgctctttatggttggatatgcatcagctttggta
tccttactgaatccatgcaccaatgagatgatatgcaatgatggacaagaaaactgtact
gtcccagaaaatccttcctgccaacacagcaccacattcagcagattactgcttaacctc
tttacattgaccattgggatgggagacctagaggtgatcagccatgccaagtaccctgca
gtcttcatcattctgttggtgacatacctcatcatcacctttgttctcctccttaacatg
ttaatcgctttaatgggagagaccgttggggaggtgtccaaggaaagcaagcagatctgg
caactgcagtgggctaccacaatcctagatatagagaggtatcttccagccttcatgagg
aaagccttccgctctggagaagcggtaattattggactaaaacagaataaagagcaggat
gaacgctggtgttttagggttgatgaggtgaactggtgccactggaaacaggatattgcc
attattaatgaggatcctggaaggtgcaacttgcagagagatcgaccgttagtggggaag
cataaagctgaccaacattcagaagataccatggtgcttcttgaaaaagacccacaagcc
cagactcataagaagaactggagaaataatgaatcacaaatataa
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