Xenopus tropicalis (tropical clawed frog): 100494764
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Entry
100494764 CDS
T01011
Symbol
ush1g
Name
(RefSeq) Usher syndrome type-1G protein isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100494764 (ush1g)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100494764 (ush1g)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_EPH
SR-25
Motif
Other DBs
NCBI-GeneID:
100494764
NCBI-ProteinID:
XP_004918532
Xenbase:
XB-GENE-1013607
UniProt:
F6XU46
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Position
10:complement(44130936..44147235)
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AA seq
465 aa
AA seq
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MDGRYHRAARDGFLDLLKEATRRDLNSPDEDGMTPTLWAAYHGHLGALRVIVSRGGDPDK
CDIWGNTPLHVAAANGHLNCLSFLVSFGANIWCLDNDYHTPLDMAASKGHMECVRYLDSI
AAKQTGLNPKLVSKLKERAFREAEKRIRDCAKLQRKHHERMERRYRRDMSDRSDTMSFSS
YSSSVSQRYPSATMFPTMPYSHAAGTTKGKTKIQKKLEKRKQTDGMFKIYEDGRKSVRSL
SGLQLGNDVMFVKQGTYASPRERGRQHLRDMFLPEEDSLSRAISDPGLHGGDSAHSEVST
DSGHDSLFTRPGLGTMVFRRNYLSSGLFGMGRDEGNGLQPGLGEEVKLRSRLKRSPSLDD
SIGSAGSLAVRNEQELPWEEEDLRLDDDEEPDTSPLESFLASLQMGDLVTVLQDEKIDLA
ALTLCSDHDLKSIGIPLGPRKKILDGIQRRRQAIDRPSTMGDTEL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcgctatcaccgggccgccagggacggcttcctggacctgctgaaagaggcc
acccggagagacctgaactcgccagacgaggatggaatgaccccgactctatgggcggcg
tatcatgggcacctgggggcgctgcgggtcattgtcagccgggggggtgatccagataaa
tgtgacatttggggaaatacccccctgcacgtggccgctgccaatgggcatctgaactgc
ctttccttcctggtgtcctttggagccaacatctggtgtttggacaatgactaccacacc
ccgctggacatggcagcttccaagggccacatggagtgcgttcgctatttggactctatc
gcggccaagcaaaccggcctcaaccccaaactggtgagtaagttaaaggaacgggccttc
cgcgaggcggagaagaggatccgcgattgcgctaagctgcagcgcaaacaccacgaacgc
atggagcggagatatcgaagggacatgtctgaccgttccgacaccatgagcttctccagc
tactcaagctcggtgagccagcgttaccccagtgccacaatgtttcccaccatgccatat
tcccatgctgcaggcaccaccaaaggcaagaccaagatacagaagaaactggagaagagg
aaacagacagatggaatgttcaagatctacgaagatggcaggaagagcgtacggtcgctc
tcggggctgcagctcggtaatgatgtcatgtttgtcaagcagggtacctatgccagcccc
cgggagcgagggcgccaacacctccgggacatgttcttgccagaggaagactccctctcc
cgagccatcagtgatcctggacttcatgggggggattctgctcattcggaggtcagtaca
gactctggccacgattctctgtttacccgaccgggtctcggcaccatggtgttcagaagg
aactatttgagcagcggcttgtttgggatggggagagacgagggcaatggacttcagcct
gggctgggcgaggaagtgaagttgcgcagtcggttaaagcgatcccccagcttggatgac
agtattggcagtgcggggagtctagcggtgagaaatgaacaggagctgccctgggaggag
gaagacttaaggctggatgatgatgaagaaccagacaccagcccgttggagtctttcctg
gcctcccttcagatgggcgacctggttactgtattacaggatgagaagattgatctggcg
gcccttactctgtgctctgaccatgacctcaagagcatcggcatccctctggggccccgc
aagaagatcctggatggcatccagagaaggaggcaggcaatcgataggccctctaccatg
ggagacactgagctataa
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