Xenopus tropicalis (tropical clawed frog): 100494771
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Entry
100494771 CDS
T01011
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04518
Integrin signaling
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100494771 (itga9)
04514 Cell adhesion molecule (CAM) interaction
100494771 (itga9)
04518 Integrin signaling
100494771 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100494771 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100494771 (itga9)
04810 Regulation of actin cytoskeleton
100494771 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100494771 (itga9)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
100494771 (itga9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
100494771
NCBI-ProteinID:
XP_002940293
Xenbase:
XB-GENE-994231
UniProt:
F6U9K9
LinkDB
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Position
6:complement(61026999..61217709)
Genome browser
AA seq
1034 aa
AA seq
DB search
MAGKPLYGSERSHWKLMVAAISVTLVCSYNVDLDHPVVFRGPNGSFFGYSVLEHYHDETR
WVLVGAPKADSRYSSSIKTPGAVFKCRVHSNPNKSCTELDLGRGNSRGTRCGKTCKGDRE
DEWMGVTLARQPKANGSVLACAHRWKNIYYESEDILPYGYCVIIPPNLHANGNNLMPCYE
EYKKKYGEEHGSCQAGIAGSFMEELVVMGAPGSYYWTGTVKVLNLTDNKYFKLRDQVATE
KRYTYLGYAVTAGHFSQPTTMDVVAGAPQDSRIGKVFIFRTDKRSVSLVKIFQASGKKVG
SYFGSSLCAVDLNSDGLSDLLVGAPMFSEVRDEGQVTVYINRGNGVMDEHINLNGDNAYN
AHFGESMANLGDIDDDGFPDVAIGAPQEDDYAGAVYIYHGDTLGIVSKYSMRISSKSIGP
GLMMFGQSVSGGIDMDKNGYLDLTIGAFMSDTAVLLRTRPVITVDVTILLPTSINITAPQ
CHDGTQQINCVNVTVCFRFRGKHVPGEIELYYNLTADVAKKEKSQQPRVFLVSSGENVAQ
VSEKLQLTHLELKCEQYLAHVKRRVKDVISPIVFEASYSLGEHIINNQQKELPALKPILR
WKKGDKLAQRNQTRFERNCRSDDCAADLNLKGKLLLSSFDSKTPYLALGAVKNISLNISV
SNYGDDAYDTNVYFNFSRELYFIKMWQEDELGISCELLEDDFLKCSVGFPFMRSKSKYKF
SVIFDTIHLSGDEESLQFLVTAQSGNIEKEESLHDNILHLAVSLMHEVDTSVTGVVSPSS
FVYGESVDPSNFIQLQDLECHFQPLNFSFQVYNAGPSTLPGSTINVLFPNRLTATGAEMF
YIQDIMVSQDKGNCSFQKNPAPCVIPQDKENIFHTIFAFFTKSGRKMLECERTSKSCLVL
NCYISSLAKEETRNIDVLMLLNTEILKKDSSSVIQFVSKAVVKVDSTLRAIEVQQGNSNQ
ATVIFEALHNLEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYKEIIEAEKNR
KENEESWNWVQKNQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaacctctatacggatcagagaggagccactggaaactgatggttgctgcg
atttccgtcactttggtctgttcgtacaacgttgatttggatcacccagttgtgttccga
ggtccgaatggttctttctttggctattctgtcctggaacattaccacgatgagacaaga
tgggtgttagttggtgcaccaaaggctgactcaaggtatagttcttctatcaaaacccca
ggagctgttttcaaatgccgagttcacagcaatccgaacaaaagctgcactgaactggat
ttgggacgaggaaatagtcgggggactcgctgtggaaaaacatgcaaaggtgatagagaa
gatgaatggatgggagtgaccctggctagacagccgaaggctaatggcagtgtattggct
tgtgcacaccgctggaagaatatctactatgaaagtgaagatatacttccatatggctat
tgtgtcatcattccaccaaacctgcatgccaatggaaataacttaatgccatgttatgaa
gaatataagaagaagtatggtgaagaacatggctcttgccaagcagggattgcagggtct
tttatggaggagctggttgtgatgggagcccctggatcatattattggacaggaacagta
aaggtgttaaaccttacagataacaaatacttcaaactaagagatcaagttgccactgaa
aaacgctatacatacttaggatatgctgtgactgcaggtcatttttcccagcctacaaca
atggatgtagtagcgggagctccacaagacagcagaataggaaaggtgtttatcttcaga
actgataagaggtctgtatcgcttgttaagatttttcaagcttctggaaaaaaggtgggc
tcttactttggctcctccttatgtgcagttgatctgaactctgatggcctctcagaccta
ttagttggtgctcccatgttctcagaggtgagggatgagggacaagtcacagtgtatatc
aacagaggaaatggagtgatggatgaacatataaatttaaatggtgacaatgcatacaat
gcacattttggagagagcatggccaacctgggggatattgatgatgacggctttccagat
gtggccattggagccccacaagaagatgactatgctggagcagtttacatttatcatggg
gatactttaggaattgtgtctaagtactcaatgaggatttcttcaaaaagcattggtcct
ggcttgatgatgtttggtcagtcagtgtctggagggattgatatggacaaaaatgggtac
ttggatctcacgattggggcctttatgtctgatactgcggtgctactgagaaccaggcca
gtgattacagtggatgttacaattttactgccaacctccatcaacatcacagcgccgcag
tgccacgatggtacacaacaaataaactgtgttaatgtcactgtctgcttccgctttcgt
gggaaacatgttccaggagagatagaattgtattacaacttgacagctgatgttgcaaag
aaagaaaaaagccaacagcccagagtgtttttggtgtcatctggagagaatgttgcacaa
gttagtgagaaactccagctaactcacttggaattgaagtgtgaacaatatctcgcccat
gtcaagcgtagagttaaggatgtcatatcgcctatcgtctttgaagcatcgtatagtctt
ggtgagcatatcattaataaccagcagaaagaactgcctgctcttaagcctatacttcga
tggaaaaagggagacaagctagcacagcgaaatcagacccgttttgaacggaactgtcgc
tctgatgattgtgcagctgatttgaacctgaaaggaaaacttcttctgtcaagctttgat
agcaaaaccccttacttggcattgggagctgtaaagaatatttcccttaatatctcagta
tccaactacggtgatgacgcatatgatactaatgtatacttcaatttttcaagagaattg
tacttcatcaaaatgtggcaagaggatgagctgggcatttcctgtgagttactggaagat
gactttctcaagtgcagcgtgggatttccattcatgagatccaaatccaagtacaaattc
agtgtgatctttgacaccatccacctgtctggagatgaagaatccctgcagtttttagtc
actgcacaaagcggaaatattgaaaaagaagagtctctacatgacaacattctccatctg
gcggtttctttaatgcatgaagttgacacatcagtcacaggtgttgtgtcaccatcctca
tttgtttacggtgaatctgtggatccttcaaattttattcagctgcaggacctggaatgt
cactttcagcctttgaattttagctttcaggtttataatgctggaccaagtacccttcca
ggatcaaccattaatgtgttgtttccgaatcgcctcactgctactggtgctgaaatgttt
tacattcaggacattatggtgagccaagacaaaggaaattgctctttccagaaaaaccct
gcaccttgtgtaattccacaagataaggaaaatatatttcatacaatatttgctttcttt
actaaatctggcagaaaaatgttggagtgtgaacgaacaagcaagtcctgtttagtctta
aactgctatataagctcactggcaaaagaagagactcgaaacatagatgtgcttatgttg
cttaacacagagatactcaaaaaagacagttcatcggttattcagtttgtctcaaaagca
gtggtgaaagtggactcaactcttagagcaattgaggtgcaacaaggaaattctaaccag
gcaacagtgatttttgaggccttgcacaatctggaaccacgtggatatgttgtcggatgg
attattgccatcagtttgttagttgggattctcatatttttgttgttggctgttcttcta
tggaagatgggtttctttcgcagaagatacaaagagatcattgaagcagagaagaatcga
aaagaaaatgaggaaagttggaactgggtacagaaaaaccagtga
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