Xenopus tropicalis (tropical clawed frog): 100494800
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Entry
100494800 CDS
T01011
Symbol
ptchd3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100494800 (ptchd3)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
Patched domain-containing proteins
100494800 (ptchd3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
100494800
NCBI-ProteinID:
XP_031759849
Xenbase:
XB-GENE-950407
UniProt:
A0A8J1JPP3
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All DBs
Position
6:24834062..24839670
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AA seq
982 aa
AA seq
DB search
MKMNGCNTDCLEKPLSRGFGSLGRLIARYPWWFIVVPVVLSIGSGVGFCFLEQRQIMMFE
NEFPSPGSLLKREGDFIRTHFPMNNTEHLSTRQLYNEGSFASIIIVSLSQNLLNKSKYEE
LQRLDAAVRSLSLGSEIHFQSLCALINGSTCFSANPLLDLIQNGTIRTNITYPMFQNRVF
LGKYIGGVTLGPDNTVLRAQALRFVYYLREDTEQQLVNNTKWLNNFIASFPQHLQMLQLK
SVQVKKSCFFLVQFPPQCLSPVSPALIEHFLQKLVGPHADIFCKKFFVFFLRWAGLQEQY
YLFIFVYYYTSVSLQKQLEEDAKRAMPFFSVTFIVTILFSVLSCVRCHNVRNKIWVALFG
VISPGLAILTSFGLLLMCGAPFAITAVNAPFLILGAGVDNMFIIISCWQQTKMRATLEER
MAETYQEAAVSITITTLTDVLAFYIGIMTHFPSVQSFCIYAGTALVFCYVYCITFFGAVL
ALNGKLENDNRHWFICVKVNDTEESGQNTMYQMCCLGGSFETSEGIEIEHPVTVFFHKYY
GVFLTNQWTKLLTVVVYLGYLAISIYGCFKLQGGVDIQKFPNDNSYLSQYYTNEALYFAG
YGPRVMVVVTSEIAYWEPQTSKEIESCMQKLENNSYVDKKFTESWLRTYEHMSKALNVSI
ITKDGFMNNLDIIFAYFAEFKQDIDKEGNKIKASRFFVQTINVVGAIDERNMATQLRGIA
ASCNIPLFVYHPIFICLDRYALIIQSAVQNMIVAFVVMLVVSLLFIPNPLCSLWVTFAIA
SIIVGVAGFMAFWRVNLDSISLITLVICIGFSVDFSSHIAYACFSSKKEKTEERVIDALH
VLGYPIVQGALSTILGVVALSVAESYIFKTFFKLTCLVIAFGVLHGLVFIPVFLTIIACP
RWSHVSKVKPLKISHQPANIMTELERQRENPIRSVQKDNLSGYSCSMPDVLSTSIPFTTC
YYMGWKAGVFSIFHSEKFPQEK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaatggatgtaacactgactgcttggagaaacctctgtcgagggggtttgga
agtcttggcagactgattgccaggtatccttggtggtttatagttgtgcctgttgttctt
tctattggatcaggagtagggttttgttttctggagcaaaggcaaatcatgatgtttgag
aatgagtttccttcgcctggaagtttattaaagagagagggggatttcatcaggacacac
ttcccaatgaacaacacagagcatctttctacacgacaactttataacgaaggttcattt
gcctcaatcatcattgtcagcctgtcacaaaatctcttaaataagagcaaatatgaggaa
ctgcagaggctggacgcagcagtgagaagcttgagtttaggttcagaaattcatttccag
agtttatgtgccctgattaatggctctacatgcttttctgctaaccctctgcttgaccta
atccaaaatggcacaattaggaccaacataacctatcccatgttccagaacagagtattc
ctgggaaaatatattggtggtgttacactgggcccagacaacactgtgctacgagctcag
gcactaaggtttgtctactatctgagagaagacacagaacaacaactagtcaacaacaca
aagtggctcaacaattttattgcctcattcccccagcatctacaaatgttgcaactaaaa
tcagttcaggtaaaaaaaagttgtttttttctggttcaattcccacctcaatgcctgtcc
ccagtttcgcctgccttaatagaacactttttacaaaagttagtaggaccacacgcagac
atcttctgtaaaaagttttttgttttttttttacggtgggcagggcttcaggaacagtat
tatttatttatttttgtttattattatacatcagtttcactccaaaagcagcttgaagaa
gatgcgaaaagagcaatgccgtttttctcagtaacattcattgtgacaattttgttctct
gttctctcttgtgtgagatgccacaacgtgagaaacaagatttgggtggctttatttgga
gtaatttctcctgggttagccatactgaccagctttggcctgctattaatgtgtggggcg
ccctttgccataacagcggtcaatgctccatttcttatcttgggagctggggtcgataat
atgttcattattatctcttgctggcagcagactaaaatgcgggctaccctagaggaacgg
atggctgaaacataccaagaggcagcagtctccataaccataaccactctcactgatgtc
ctggctttttacatagggataatgactcacttcccatctgtgcagtcattctgcatctac
gctggtaccgcacttgtattttgctacgtgtactgcatcactttctttggtgcagtgctg
gccctgaatggaaaactggaaaacgacaatagacattggtttatctgtgtgaaagtgaac
gatacagaggaatccggtcaaaacactatgtatcaaatgtgctgccttggtggatctttt
gaaacatcggagggaatagaaattgagcaccctgtaacagtgttcttccataagtattat
ggggtatttctcacaaaccagtggacaaaattactgacagtagttgtctatcttggctat
ctggctattagtatttacggttgttttaagttacaagggggagttgatattcagaagttc
cccaatgacaattcttatctcagtcagtattatactaatgaggcgttgtactttgcaggt
tatggtcccagggttatggtggttgttaccagtgaaatagcttactgggaaccccaaacc
tctaaagagatagaaagctgcatgcagaagctagagaataattcttacgtagacaagaaa
tttacagagtcctggttgagaacctatgagcatatgtctaaagctttaaatgtaagcata
ataactaaggatggttttatgaataatttggatataatatttgcctattttgcagaattc
aagcaagatatagataaggaggggaataaaatcaaagcttcccgtttctttgtacagaca
attaatgtagtcggtgccattgatgagagaaacatggcaacccaattgcgtggaatagct
gccagctgcaacatcccgctgtttgtgtaccatcccatttttatctgcttggatcggtac
gctttaatcattcagagcgctgtccaaaatatgattgtggcttttgttgtaatgttagtg
gtctctttgttgttcatcccaaacccattgtgttctttgtgggtgacgtttgccattgct
tctataatagttggagttgctggtttcatggctttctggagagttaatctagactccatc
tcactaatcacactggttatatgcataggcttctcggttgatttttcatcacatatcgcc
tacgcgtgcttctccagtaagaaagaaaaaacagaagaaagggtgattgatgctttgcat
gttctaggatatcccatagtacaaggagcactctcaacaattctaggggttgtggccctc
tctgttgcagagagttatatcttcaaaacattctttaagcttacatgcctagttattgca
tttggggttcttcacggcctggtatttattccagtttttttaactatcatagcatgcccc
agatggtcccatgtcagtaaagtgaaacctctaaagataagtcatcagccagccaatata
atgacagaactggagagacaaagagaaaatccaataaggtcagtgcagaaagataaccta
tcagggtattcatgctccatgccagatgtgctcagcaccagtattccattcaccacttgc
tactacatgggatggaaagcgggtgtattttctatttttcactcagaaaaattccctcaa
gaaaaatga
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