Xenopus tropicalis (tropical clawed frog): 100494833
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Entry
100494833 CDS
T01011
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100494833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100494833
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100494833
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
KRAB
C2CH-3rd_BIRD-IDD
Zn-ribbon_8
zf-C2H2_11
LIM
zf-met
Motif
Other DBs
NCBI-GeneID:
100494833
NCBI-ProteinID:
XP_002942448
UniProt:
A0A6I8PUJ0
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Position
2:complement(174486734..174492771)
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AA seq
552 aa
AA seq
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MVMSSKNKNGATKEILDLTIEILSLLTGEDYILIKKELSNGEDYSDHNTSDSTEETNSLQ
HLWENGQKVLELANKIVCLLTGEVPVRCEDVAIYLSQEEWEYLAGHRELYTEHKAMSLLG
ECKNMSPTGRGCLSLYPHRCTEEERRAGRDFKVEQADLVHTEVIPTDAIKTEAPSEDYPD
TAPTCENETQIPTDRLQGAAIGNDFHSSLEAHLPDSPSRHRKMECSSDDTDTPEAKGYTC
TDCGKHFTIESDYICHQRTHSPEMFRCSDCHNCFGSLAELVIHQTLYKEQCGKTVLSRGK
SPTQQSERQGKGGKGVTQLVTNNGVKPFTCSECGKSFTKRSNLTMHQKIHSGERPFSCSE
CGKCFTQSSKLLIHQGTHTEEKPFACSECGKSFSQMGYLLTHKRIHTGEKPFSCPQCGKL
FTRKSTLLKHQRIHTGSFPCSYCGKCFSQKSNLMSHQRIHTREKPFACASCDKCFTDKSA
LIKHERVHTGERPFICTHCGKGFTQITHLTTHLRSHTGEKPFACPDCGRCFAGKPALVKH
RRLHAKETALVY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgtccagtaagaacaagaatggggccactaaggagatcttagatctgactatt
gagattctctccctgctgactggagaggattatattctaataaagaaggagctcagcaat
ggagaagactacagtgatcataatacatcagactctacagaggagacaaattcccttcag
cacctgtgggaaaatggccaaaaggttctggaactggccaataagattgtttgcctgctg
acaggagaggttcctgtgcgctgtgaggatgttgccatctatctctcgcaggaggagtgg
gagtatttagccggacaccgggagctttacacagagcacaaggctatgagcttgttgggt
gaatgtaagaacatgagccccacaggccgcggctgcttgtctttgtacccacaccgttgc
acagaggaagagaggagggctgggcgcgactttaaggttgagcaagcagatcttgtacat
acagaggtgataccaacagatgcaataaagacggaagctccatcagaggattatcctgat
actgcgcctacgtgtgagaatgagacccagatacccacagacagactgcagggagctgcc
ataggcaatgatttccactcatcactagaagcacatctcccagactcacccagccgccat
aggaagatggaatgttcatctgatgatacagacaccccagaagctaaggggtacacctgt
acggattgtggcaaacactttacaatagaatcagactatatctgtcaccaaagaacacac
agccctgagatgttccgctgctccgattgccataactgtttcggcagtctcgccgagctc
gtcatacaccaaactctgtacaaggaacagtgcggcaaaactgtgctttctagaggcaaa
tctcccacccagcagagcgagaggcagggaaaaggtgggaaaggggtcacccaactagta
accaacaacggggtgaaaccattcacctgctcggaatgcgggaagtctttcactaaacgt
tccaatctcactatgcaccagaaaatccattccggggagagaccgttttcctgctccgag
tgtgggaaatgcttcactcagagttccaagctcctgatccatcaggggactcacacagag
gagaaaccatttgcttgttccgaatgcgggaagagcttttctcagatgggttatctctta
actcacaagcgcattcacacaggggagaagccgttctcctgcccgcagtgcggcaaactg
tttacacgcaaatcgactctcctgaagcatcagaggattcacacgggatcctttccctgt
tcctattgtgggaaatgcttcagccagaagtccaatctgatgtcccaccagcgaatacac
accagggagaagcctttcgcctgcgccagttgcgacaaatgtttcacagacaagtcggcc
ctcattaaacacgagcgagtccacaccggggagcggccatttatatgcactcactgcggg
aaaggcttcacccagataacccatctcaccactcatctgaggagtcacacaggggagaag
ccatttgcctgcccggattgtgggcggtgtttcgcgggcaaaccggccctcgtcaagcat
cggcggcttcacgctaaggagaccgctcttgtgtactga
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