Xenopus tropicalis (tropical clawed frog): 100494904
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Entry
100494904 CDS
T01011
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00280
Valine, leucine and isoleucine degradation
xtr00650
Butanoate metabolism
xtr01100
Metabolic pathways
xtr04146
Peroxisome
Module
xtr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100494904 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100494904 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100494904 (hmgcl)
Enzymes [BR:
xtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
100494904 (hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
100494904
NCBI-ProteinID:
XP_002934605
Xenbase:
XB-GENE-1002069
UniProt:
A0A8J0QPT9
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Position
3:90015022..90026565
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AA seq
331 aa
AA seq
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MLAVSVRRAVALGWGAGWTPLAILRQLSSLPIQSFPKEVKVVEVGPRDGLQNEKTVVPSE
VKIHLINLLSEAGLQAIEATSFVSPKWVPQMADHKNVIQGIKKYPNVTYPVLTPNLTGFQ
AAVECGAKEVAIFGAASELFSKKNINCSIDESLQRFKDVIAAAKEANIPVRGYVSCVLGC
PYEGKVAPSKVAEVAYKMFSMGCYEISLGDTIGVGTPGGMRDMLRAVLDVVPAKALAVHC
HDTYGQALANILVALQMGVQVVDASVAGLGGCPYAQGASGNVATEDVVYMLHGLGIQTGI
DIKKLTEAGAFICKALGKKSNSKVAQAMCKL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggtgtctgttcgtagagctgtagctttgggttggggagcgggttggacacct
ttggcgatcttgcggcagctcagttccctgccaatacaatcattccctaaagaggtaaag
gttgtggaagttggacccagggatggactgcaaaatgaaaagacagttgtcccatctgaa
gtgaaaattcatctcattaacctgttatctgaagcagggcttcaagctattgaagccacc
agctttgtctctcctaaatgggtgcctcagatggccgatcataaaaatgtcattcaggga
ataaagaagtacccaaatgtaacctacccagtccttactccaaatcttactggatttcaa
gctgcggttgaatgtggtgcaaaggaagtagccatatttggagctgcatcagagctcttt
agcaagaagaacattaactgttctattgatgaaagtttgcaaagattcaaggatgttatt
gcagcagctaaggaagcaaacatcccagtgcgagggtatgtttcatgtgttcttggatgc
ccatatgaaggcaaggtagctcctagtaaagtggctgaagtggcatacaagatgttttct
atgggctgctatgagatctctttgggtgacacgattggagtgggaactcccggcggtatg
agggacatgctgagagctgtgttggatgttgttccagccaaagctctggctgttcattgc
catgacacatatggacaggcactggcaaatatactagttgcattgcagatgggagtgcag
gttgttgatgcttcagttgcaggtttgggaggatgcccatatgctcagggagcttcaggg
aatgtggcaactgaagatgttgtgtatatgctgcatggtcttggaattcaaacaggtatt
gacataaagaaactgacagaagctggagcttttatctgcaaagcactaggaaagaagagc
aactcaaaagtggctcaagcaatgtgcaagctttaa
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