Xenopus tropicalis (tropical clawed frog): 100494932
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Entry
100494932 CDS
T01011
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X2
KO
K10896
fanconi anemia group M protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100494932 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100494932 (fancm)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100494932 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Cas3-like_C_2
HHH_2
Motif
Other DBs
NCBI-GeneID:
100494932
NCBI-ProteinID:
XP_004917200
Xenbase:
XB-GENE-994655
UniProt:
A0A8J0R6M3
LinkDB
All DBs
Position
8:92621389..92707654
Genome browser
AA seq
2226 aa
AA seq
DB search
MSGKQKTLFQTWGNNQPPETRKAKETKPRKGKTSAVGRGKQSVPRGVLHRPPVPVRQQPS
TCQQEVEDDDDDVLLVAVYEAEKTLNQSGILNAEGLQSKDKQNAHSVQGNHSVQGNHSVQ
GKLWDELGKTSSPAVLGLPGIACQIQGNQRGNNTAINSDCRTFGTSRNVPTTNQDMESKD
EAKATDIENLPGFDLSAGSVWIYPTNYPIRDYQFNISYTALLQNTLVCLPTGLGKTFIAA
VVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACFRVMGIPQDHMAEMTGSTQAQNRKDMWE
KHRVFFLTPQVMVNDLTRGACPASEIKCLVIDEAHKALGNHAYCQVVRELTNYTNQFRIL
ALSATPGGDTKSVQQVVSNLLISQIELRSEDSPDIQPYSHERQLEKFVVPLGEELESVQK
TYLQVLETFAGRLLKNNVLSRRDIPNLTKYQIILSRDQFRKNPPANVIGAQQGVIEGDFA
LCISLYHGYELLLQMGTRSLYSYLHGIMDGSKGMTRARNELSRNGDFMELYQQLENMFSD
LNVTEGNGSLLFNTSLRADAKKPFVYSHPKLKKLEDVVIQHFKSWNKNGDQNTSNQIPGD
TRIMIFSSFRDSVQEIAEMLNQHHPTVRVMTFVGHSSAGKGVKGFTQKEQLEVVKRFREG
GFNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGRKRQGRIVVILCQGREE
RTYNQSQSNKRSIYKAILGNNKMLHLNPQSPRMVPEGLNPKVHKMFITQGNYEAKESIRP
KHKDRRSSTKHCNSSLFLNASDTLKEEWDLTHAEFETWNRLYRLQESDGIMDVRLPKSQF
EYFRDAEPNKERPSGNIHKLSLTEWRVWQNRPFPTDSVDHSDRCKNFIHVMEMIELMRLE
EGDCNYDLEMMSYLNKEDVDPTATNTRAINVLDNNSKVAEKSTHPKKGKTYKNTPLSLVL
EPDEDFMSSCKKITKSHSTDFVAVDSKVHAQGTEEGGSTELERVVGLNEDDHGKESVFSA
NVTKYKDSRSNAVTSNQSDSDHMLLISDTEDAVAKSQSNVDAKADSGYHSFNEDPSSNLS
NLFYTPQSFINHGVFTEFVDNKICELKKMLLHIKRFLSHSPPPINELDCLDDFQKYENFS
HHSCLSDPVKDKTQEDLLLQPLTQQPLTPVPVTINSKEMQAELNHKKQTDRVAGTLLPAT
EVKKDDVLFGEDRLKPRDVIQTVGGKAACSEKNVGFYSEDSSKPSSSKDLHDVRTENDDH
WDELFDYESQDKENENFTFQVNMPVLEGGDTEGSSAENENHNIDSVPTFLEDSFDLFEED
GFSDNANYGQLHSKHESTDKPHENAKTTVTFNMFDPSSLLQEQVQTEDEPETKDDIWSQE
NLEELDCSEELYSVNFDLGFSIEDDELSESDGKNETPSKDSKDDELSEIDSKNETPSKDS
KDDNLSDSKNVTPSKDFKVPNPLKRNDMNAIGGNAVSTPVVSSNICSTFSEVAEKQIHLF
SPLEPVRGKISLTPEKSLCSSSFFTPIGEKFRSPQTPLGNLCDSEAGELQSSKAGEKSIH
STTNFSVHDGRVVQAERRQTNSCSEHSLIESSPESEDDVVICRKRKLTKANVLMSPQTAS
SDCDFDSPIPTAKKRRHVLKTPDSDEEEEEDNFKSTHSTARDKSAGHSRKSYQHRAIAVS
KKRKRCKQRARQFLDEEAELSSEGAEFVSSDEDMNSDNEQDTSLVEFLNDDPQLSQALND
SEMHGVYLKSVRSPAFGGRFKMAPQRRRHNMSVFSQIPEQDESYMEDSFCVQEEDDEEEA
DNLGSSEEEVEINFDLLKDVSIVGGKKQYCTRRRLKLKEAQSRQRNDTHPVKKKTRLIIQ
DDSSEEEETEAKSRLKDTSPPQKTLPSSKPSLGNTSCQNQSAPTLINNELDIPLRDRCQA
RINIKASISDELDFQPESKCSSGSKSRTLSEVVHSKGKEEVSIGRVNFDLTMDSSAVANL
SFPGTVGVSALAGIRTLCILADSREISSGPEVISYLKMSLGVKVEVCSLGGCDYIVSSRL
AVERKSQSEFANSANRSKLVDRIQHLQHLFDRVCLIIEKDRIKQGETSRTFQRTRYYDST
LSALISAGVQVLFSSSQEETAGLLKELGLLEQRKNTGIDVPTEVKGHKQEVMQFYLSIPN
ISYITALNLCQRFDSIRQMANSSVQVISARAHVSAQKAEELYRYVHYMFEAEMVASENPA
KRSRVS
NT seq
6681 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaaacagaaaacacttttccagacgtggggaaataaccaacccccggaaacc
aggaaggccaaggaaactaagcctagaaaaggtaaaaccagcgcagtcggtcgaggaaag
cagtcagtgccaaggggggttctacacagaccgcctgtaccagtcaggcagcaaccttcg
acctgtcaacaggaggtggaagatgatgatgatgatgtactgctggtcgctgtatacgag
gcagagaaaacacttaaccaaagcggaatcctaaatgctgaaggtctccagagcaaagac
aagcagaatgcccactcagtacagggcaaccactcagtacagggcaaccactcagtacag
ggcaaactatgggatgaactggggaaaacatcttcacctgctgtccttggtttacctgga
attgcatgccaaatacaggggaaccaaaggggtaacaacactgctatcaacagtgactgt
agaacttttggaacctctagaaatgtacctaccactaatcaggatatggaaagcaaggat
gaggcaaaagccactgatattgaaaacctgcctggctttgacctgtcagctggtagtgtg
tggatctatccaactaattatcctatacgagactatcagtttaacatatcttacacagct
ttgctgcaaaacacccttgtatgtctgcccactggactgggtaaaacattcatagctgct
gtggtgatgtacaacttctaccgctggtatccttcaggcaagattgtctttatggcccct
accaagcccctggtggcccaacagatcgaggcctgctttagagtcatgggaattccacag
gaccatatggcagaaatgacaggaagtacccaggctcaaaatcgtaaagacatgtgggaa
aagcacagagtcttttttcttactccccaggtcatggtgaatgatcttacacgtggtgct
tgtcctgcttcggaaataaaatgtctggttattgatgaagcacataaagctcttggtaac
catgcctattgtcaggttgtaagagaattgaccaactacacaaaccagtttcgtattctt
gctctgagtgccacaccagggggtgatactaagtcagtgcaacaggtggtgtccaacttg
ttgatctcacaaatagaactcaggtcagaggattctcctgatatccaaccctacagccat
gaaaggcagcttgagaagtttgttgtgccacttggtgaggaactcgagtctgtgcagaaa
acctacctacaggtgctggagacatttgctggacgtcttctaaaaaacaatgtgctgtca
aggagagatattccaaatctaacaaaatatcagatcattctgtctcgagatcagttcagg
aagaatcctccagcaaacgtaattggagctcagcaaggggtgatagaaggagattttgct
ctctgtataagtttataccatggttacgaacttctcttacaaatgggaactcggtcttta
tactcctatcttcatggaattatggatggctccaaaggtatgacccgtgcacggaatgag
ctcagtcgcaatggagacttcatggaactctatcagcagctggagaacatgttttctgac
cttaatgttacagaaggaaatggaagtcttctttttaacacaagtctaagagcagatgcc
aaaaagccatttgtgtatagccacccaaagttaaaaaaactagaagatgttgttattcag
cattttaaatcttggaataaaaacggagatcaaaatacttccaaccagattcctggagac
actcggatcatgattttctcttcatttcgagacagtgttcaggagattgcggagatgctt
aaccaacaccaccctactgtaagggtaatgacctttgtaggccattcgtccgctggcaaa
ggagtcaaaggtttcacacaaaaagagcagcttgaggttgtaaaacggtttcgtgagggt
ggttttaacacgctggtttcaacatgtgtaggggaagaaggtcttgatataggggaagtg
gatcttatcatatgtttcgatgcccagaagagtccaattcgtcttgttcaaagaatgggc
cgaactggcaggaaacgtcaaggccggattgttgtaatactttgtcagggacgggaggaa
aggacttataaccagagccagagcaataaacggagcatctacaaagctattttaggcaat
aacaaaatgttacatctcaatcctcaaagccctcgcatggttccagaaggtttgaaccca
aaagtgcacaagatgttcatcacacaggggaattatgaagccaaagagagcattcggcca
aagcacaaagacaggcgctcaagtacaaagcattgtaattcctctctgttccttaatgca
tctgatactttaaaagaggagtgggatctgacacatgctgaatttgagacctggaacaga
ctgtaccggctgcaggagtctgatggaataatggatgtaagactgccgaaatctcagttt
gagtactttagagatgcagaaccaaacaaggaacggccatctggaaatatacacaagctc
tccttaactgaatggagagtctggcaaaaccgacccttccctaccgactcagttgatcac
tcagacagatgcaagaatttcatacatgtcatggagatgattgagctgatgagactggag
gagggtgattgcaactatgatttggaaatgatgtcttacttgaacaaagaagatgttgac
ccaacagccacaaacacaagagctatcaatgttctggataataattcaaaagttgctgaa
aaatcaactcatcctaaaaaaggaaaaacctataaaaatacacctttatctttagttctt
gagcctgatgaggattttatgtcctcatgtaagaagatcacaaaatcacattccacagac
tttgtagcagtagattcaaaggtccatgctcaaggaacagaagaaggtggcagtacagag
ttagaacgtgtggttggtttaaatgaggatgatcatggtaaagaaagtgtttttagtgca
aatgtcactaaatacaaagactctaggtctaatgctgtaaccagtaatcaatctgattca
gaccacatgttgttaataagtgatactgaagatgcagttgctaaatctcagagtaatgta
gatgccaaagctgattctggataccatagttttaatgaagatccttcctccaatttatcc
aacttgttttatactcctcagtcatttattaatcatggtgtgtttacagaatttgtagac
aataaaatctgcgagctgaagaaaatgttattacatataaaaagattcttgtcacattct
cctcctccaataaatgaacttgattgtttggacgattttcagaaatatgaaaacttttcc
catcactcttgcctttctgaccctgtaaaagataagactcaagaagatttattactacag
ccactaacacagcagcctctaacacctgtacctgtaacaatcaattcaaaagaaatgcag
gctgaacttaatcacaagaaacagactgaccgtgtagccggcacactgttaccagctact
gaagtaaaaaaagatgatgtactttttggggaggatcgtttaaaacccagagatgttata
cagacagtaggtggtaaagcagcatgttcagaaaaaaatgttggattttacagtgaagat
tcttcgaaaccaagcagctccaaagatttacatgatgttaggacagaaaatgatgatcat
tgggatgaattgtttgattatgaaagccaagataaagaaaatgaaaacttcacttttcaa
gttaacatgccagtgttagaaggtggtgacactgaaggttcatctgcagagaatgagaac
cacaatattgattccgtgcctactttcttggaggacagctttgatttatttgaagaggat
ggattttctgataatgccaactatgggcagttacattctaaacatgaaagcacagataag
ccacatgaaaatgctaagacaactgtaacgtttaacatgtttgatccatcttctttgctt
caagagcaagtacaaactgaagatgaaccagaaacaaaggatgatatttggtctcaagag
aatttagaagaacttgattgctctgaggaactctattctgtcaattttgatctagggttt
tctattgaagatgatgaactttcagaaagtgatggtaaaaatgagaccccttccaaggat
tccaaagatgatgaactttcagaaattgatagtaaaaatgagaccccttccaaggattcc
aaagatgataatctttcagatagtaaaaatgtgaccccttccaaggatttcaaagtccca
aaccccctcaaaaggaatgacatgaatgccattggaggtaatgcagtttcaacgcctgtg
gtgtcttctaatatttgctctacattttcagaggtagctgaaaaacaaattcatttattt
tcaccacttgaaccagttagaggaaaaatctcattaactcctgaaaagtcattgtgctct
tcatcattttttacaccaattggtgaaaagttcagaagtccccaaacgcctttaggtaat
ctgtgtgactctgaggctggtgaactacaatcctccaaagcaggagaaaaaagcatacac
tctacaactaatttcagtgttcatgacggcagagttgtccaagcagaaagaagacagaca
aattcatgttcagagcactcattgatagagagcagcccagaaagtgaggacgacgttgtt
atctgtcggaaaagaaaattgacaaaggccaatgtccttatgtcaccacagactgcaagc
agcgactgtgattttgactcaccaattcccactgctaagaagcgcagacacgtgttaaaa
acacctgactcagatgaggaggaagaagaagacaatttcaagtcaacacattccactgct
cgggataaatctgctggccattctagaaaatcatatcaacacagagcaatagcagtatca
aaaaagagaaagcgctgtaagcaaagagcaaggcagtttctagatgaagaagcagaactt
tcctcagaaggagcagagtttgtgtcttccgatgaggatatgaattctgataatgagcag
gacacttcgcttgtggagtttttaaatgatgaccctcagctttcccaggccctgaatgac
tcagagatgcatggcgtatacctgaagtctgtgcgtagcccagcttttggtggacgtttt
aaaatggcgccccagaggaggagacataacatgtctgttttttcacagataccagagcaa
gatgagagctacatggaagacagtttttgtgttcaagaagaagatgatgaagaagaggca
gacaacttgggatctagtgaggaagaagtggaaattaactttgacctcctaaaagatgtc
agcattgttggtggtaaaaaacagtattgtacaaggaggcggctgaagctcaaggaagct
cagtcaaggcaacgtaacgatacacatcctgtcaaaaagaaaacaaggcttattattcag
gatgactctagtgaggaagaagagacagaggcaaaatccaggctgaaggatacttctcct
cctcaaaagacattgccttcctctaaaccatctctgggtaacacgtcatgtcagaaccaa
agtgctcccacgctgattaacaatgaacttgatataccactcagggaccgatgccaagca
aggattaatatcaaggcctcaatttctgatgagctagattttcagccagaaagtaaatgt
agtagtggcagtaaatcaagaacgttgagcgaagttgtccactctaaaggaaaggaagaa
gtcagtattggaagagtcaactttgatttgaccatggatagttcagctgtagcaaatctc
tccttcccagggactgtgggggtatctgctcttgcaggaatcagaactctatgcattctt
gctgacagccgggaaatctcctctgggcctgaggtcatctcctacctaaagatgtctctt
ggggtgaaagtggaggtgtgctcccttggtggatgtgattacattgtcagtagtcgctta
gcagtggagcgcaagtcacagtccgaatttgcaaacagtgcaaacaggagcaaactggtg
gatcggatccagcacttgcaacatttatttgatagagtttgtctcattatagagaaggac
cgaatcaaacaaggtgaaacgtcaaggacatttcagagaacaagatattacgacagcaca
ttgtctgcgttaatcagtgctggtgtccaggttctgttcagctctagccaggaggagaca
gcgggtttgctaaaggagctgggattattagagcagagaaagaacactggcattgatgtc
ccaacagaggtgaaagggcacaaacaggaagtgatgcagttctatctgtccataccaaac
atcagctacatcactgcactaaacttgtgtcagcgctttgactccatcagacaaatggcc
aacagctctgtgcaagtgatctctgcccgtgcccatgtgagtgctcagaaagcagaggaa
ctctatcgctatgtacattacatgtttgaagcagagatggtggcatccgaaaaccccgct
aagcgaagcagagtctcctaa
DBGET
integrated database retrieval system
