Xenopus tropicalis (tropical clawed frog): 100494947
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Entry
100494947 CDS
T01011
Symbol
emc1
Name
(RefSeq) ER membrane protein complex subunit 1 isoform X1
KO
K23562
ER membrane protein complex subunit 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100494947 (emc1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
100494947 (emc1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Motif
Other DBs
NCBI-GeneID:
100494947
NCBI-ProteinID:
XP_031761215
Xenbase:
XB-GENE-1010282
UniProt:
F6TUQ9
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Position
7:130156482..130171612
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AA seq
990 aa
AA seq
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MAAALCWVSLLVASLALSGAVYEDQVGKFDWRQQFVGRIKFASLESGLGAKKLIAATDKN
IIAALNSRTGDLLWRHVDKDTSEGSVDALMMLGQDAITVSGGRLLRSWETNIGALNWEAT
LEPGSFQAVSFAGSQDMARYVAVLKNSVLSLHFLSNGHLKWSESLPESDTVQYQLLHSPY
KGSVYVVGLVPQSHLTILTFSVEDGSISHQVRVLTPWLRTLHGTCGVVGEGVLVCGDEPM
ASVHVVSLLSGEETTRHSLQSLGIELAEDLTQLDVITAPQNAIGASLPQFFLQIAPRRFL
LMQYRDGVITPLRDFSQVSLVNFAVAGEKTVVAVMQCKSEGNQKSGAEPENPTGQSCAQE
PWYCPGHTYSINLYMADSGRRLLETTMSFTLDQSCVRPDSFYLQTFLRKDDSVGYRALVQ
TEDNQLLFLQQPGKLIWLREESLADVVTMEMVDLPLTGAQAELEGEFGKKAAIQDGLLGM
VLKRLSSQLILLQSWSAHLWKMFCDARKPRSQIRNEVNVDTLARDDFNLQKMMVMVTASG
KLFGIESSSGSILWKFYLQGVHPGSSFKLLVQRTTAHFPHPPQCTLLVKDKITEKSAMYV
FNPIFGKLSQLAPPPLNRPILQSLLLPIMDNDYAKVLLLLDDQHKVIAFPATKYVLQQLQ
ELAPTIFFYLVDAEKGKMTGLRLHKDLSTEEIWEVLLPADLQRITVIKGKRSNEHVHSQG
RVMGDRSVLYKYLNPNLLALVTESTDTHPERCFIGIYLIDGVTGRIIHSSVQRRARGPVE
IVHSENWVVYQYWNSKARRNELTVLELYEGTEQYNSTNFSSLDRPLLPHVLQQSYIFPSA
IRAMEATITERGITSRHVLIGLPSGAILSLPKALLDPRRPEIPNEYTREENLIPYTPDIQ
IHAERFINYNQTISRMRGLYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYI
LISSVLIGLVFATMITKRLAQVKLLNRAWR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctctgtgttgggtttcgctgcttgtggcctccctggcccttagcggggct
gtgtatgaggaccaagtgggcaagtttgattggaggcagcagttcgtggggaggatcaag
tttgcttcgctggaatccggtttgggagccaaaaagctgattgcggccactgacaagaac
atcattgctgctctgaactcccgcactggagatcttttgtggcgccatgttgataaggac
acgtccgagggttccgtggatgcgctgatgatgctcggccaagatgctattacggtatcc
gggggccgcctgctgcgctcctgggagacaaacattggggccctaaactgggaggctacc
ctggaacctggaagtttccaggcagtaagttttgctggcagtcaggatatggctcggtat
gtggcagtgctgaagaattccgtgttatccctgcactttctctccaatggacatctcaaa
tggtcggagtctctcccagagagtgacactgtgcagtaccagctgctccactccccatac
aaaggttctgtctatgtggtcggactggtcccccagagtcacctcactatcctcacgttc
agcgtggaagacggctccatcagccaccaggttcgggtattaaccccatggctgcgcacc
ctgcatggcacttgtggggtagtcggagaaggtgtgttggtttgtggcgatgaaccaatg
gcctctgttcatgtggtttctctactctctggtgaggagacaacgcggcattctctgcag
tccctgggcattgaattggctgaagatctcactcagttggacgtaattactgcccctcaa
aatgccataggggcgagcctcccacagttcttcctgcagattgccccccgccgcttcttg
ttaatgcagtaccgcgatggagtcatcaccccgctgcgtgacttctcccaggtttccctg
gtgaactttgctgtcgcaggagagaaaacagttgtcgccgtgatgcagtgcaaaagcgaa
gggaaccagaaatctggagcggagcctgagaatccaacaggacaaagctgtgctcaggag
ccctggtactgccccggtcacacctacagtatcaatctgtacatggctgatagcggccgg
cgcctgctggagaccaccatgagcttcaccctggatcagagctgtgtgcgacccgattct
ttctacctccagacattcctgagaaaggacgattctgtgggttaccgagccctggtacag
actgaagataaccagctcctgttcctccagcagccggggaaattaatatggctgcgtgag
gaatcattggctgatgtggtcaccatggaaatggtcgatttacctctgacaggagctcag
gctgaactggaaggggagtttggcaaaaaagcagctatacaagatgggctgctagggatg
gtgctgaagcgactctcctcccagctgatattgctgcagtcctggagcgcccacctctgg
aagatgttctgtgacgcccggaagccccgcagccaaatccgcaacgaggtcaatgtagac
accctggctagggacgacttcaacctgcaaaagatgatggttatggtgacggcctcggga
aagctgtttggcattgagagcagctctggcagcatcctatggaagttctacctgcaggga
gtgcaccccggctcttccttcaagttactcgtccagagaacaacggctcatttccctcat
ccacctcagtgcaccctgctggtcaaggataagataacagagaagagtgcaatgtacgtg
tttaaccccatctttgggaagctgagccagctggcccccccgcccctgaatcgccccatc
ctgcagtctctgctcctccccatcatggacaatgactacgccaaggtcttgctgttgctg
gatgatcagcacaaggtcattgctttccccgctacaaagtacgttctgcagcagctacag
gagctggctcccaccatattcttctatctggtagatgcggaaaaaggcaaaatgacgggc
ctgcggctgcataaggacctttctacagaggagatttgggaagttttgctcccagcagac
ctgcagaggatcactgttataaagggaaagcgatccaacgagcatgttcactcccaaggg
cgtgtaatgggcgaccgcagcgttctttacaagtatctgaaccccaacctgctggcgctg
gtgacggagagcacagacacgcaccccgagcgctgctttatagggatttatctcattgat
ggggtcacggggcgcattatccattcatccgtgcagagaagggctcggggccctgtagag
atcgtccattcagagaactgggtggtgtaccagtactggaacagcaaggctcggcgcaat
gagctgacggttctagagctttatgaaggaacggaacaatataacagcaccaacttcagc
tccctggatcggccgctgctcccccatgttctacagcagtcctacatcttcccctcggcc
atccgtgccatggaggccaccataaccgagcgaggcatcaccagtcgccacgttctcatt
ggtcttccttctggagctatcctttccctccccaaagcattgctggacccacggcgccca
gagatacccaatgaatacaccagggaggagaatctaatcccttacacgccagacattcag
atacacgccgaacgctttataaattacaaccagacgatctctcgaatgcgcggactttac
actgccccctcgggcctggagtcgacctgcctggttgtggcctacggattggacatttac
cagacacgcgtttacccttccaagcagtttgatgtcctgaaggacgactatgactacatc
ctgatcagcagcgtcctcattggcctggtcttcgccaccatgatcacaaagcgattggcc
caggtcaagctgctgaaccgcgcctggcgctaa
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