Xenopus tropicalis (tropical clawed frog): 100494954
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Entry
100494954 CDS
T01011
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7 isoform X2
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100494954 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100494954 (efcab7)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
EVC complex
100494954 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EFhand_Ca_insen
EH
EF-hand_5
EF_assoc_2
EF-hand_11
UPF0154
Motif
Other DBs
NCBI-GeneID:
100494954
NCBI-ProteinID:
XP_002931640
Xenbase:
XB-GENE-5749161
UniProt:
A0A6I8RAP5
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All DBs
Position
4:complement(85052686..85092849)
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AA seq
627 aa
AA seq
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MANNSGSNSSLQGHKYAASEQQENQKPQQSEEEIFYLASRAAYLTVFKSSLDNITNKDQL
RLVLQQTGRNPSNRVLNKYWTPRTKQLNFDDFCAILKKEKPATKNELLKAFRNIDTYNKG
YILHNDLYQVLTTKGEKMSHEEVNSVFRLAEVNSNGKLDYNKFCNTFFRTSEQCAKVASE
RMDSNSKAKRQQFGSYIEKSPERSASPSSKSSQGNSKLYDSETSPRKAENKSSRPSSARS
FKATISTVINMGIPSTRIAKLTEPNNLKNWLTTASKGCFFLEDNGDIISHHYKLQVLQKS
AVHLTIKPLNLSKAEGKLSPWMSVDTALYILKENDGQADLISFTELRNKETSGWKGELGV
GVYWLIPFTTGCRLRKKKKQTIKEARLVYRDENEDLVLTPEFKSALSDMFEIIDLDGNGL
LSLEEYNFFEMRSSGEKCDDDAWEVCKENFETKKNELTRQGFMDLNLMEANDREGDPSDL
WVTLQSMGYNKALEMTEACPFVIEVYAEKCKPRLKTVSLESSNKQLQGAVCKSAKLKGDA
KSMEGYEDVIIYTYKNDTHITSVMENKSDEKLILQVNNEQSKNCISSRGLHVFAVELLPK
SVMVCQHVMPLNEKQEWMYNCVQSILS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaactctggaagtaactcatctttacaaggtcacaaatatgcagccagcgaa
cagcaagagaatcaaaaaccacagcagagtgaggaagaaatcttctacttagctagccgt
gctgcctatcttactgtctttaaaagcagtctggacaacattacaaacaaagatcagctg
cgattagtgctccagcaaactggtcgaaatccatccaacagagtactaaacaagtattgg
actcctaggacaaaacagttaaattttgatgatttctgtgccatcctaaaaaaggagaaa
cctgctacaaaaaatgagcttctgaaagcttttaggaatattgatacatataacaaagga
tatattttacacaatgacttgtatcaagtccttaccacaaaaggtgagaaaatgtctcat
gaggaagtcaactctgtgtttcgtttagctgaagtaaacagcaatggcaagcttgactac
aataagttctgtaacacattctttagaaccagtgaacaatgtgctaaggtagcatcagag
agaatggacagcaacagcaaggcaaagcgacagcagtttggaagctatattgaaaagtca
cctgagcgttctgcttcaccgtcatcaaaatcatcccaaggaaattcaaagctttatgat
tctgaaacttctccaaggaaagctgaaaataaatcatctaggccctcttcagctcgtagc
tttaaagctacaatatctacggtaattaatatgggcatacctagtaccaggattgccaag
ctcactgagccaaataatttgaagaactggcttaccacagcaagcaaaggatgctttttt
ctagaggacaatggtgatataatcagccatcattacaaattacaagttcttcaaaagtct
gcagttcatctcacaatcaaacctttaaacctcagcaaagctgaaggaaaactttcacca
tggatgtctgttgacactgccctgtatatccttaaagaaaatgatggccaagcagacctg
atttctttcacagagctcaggaacaaagagacctctggatggaaaggggagcttggagtt
ggtgtttactggctcattccatttacaacaggctgtagactgagaaagaaaaagaaacaa
accatcaaagaagcccgactggtgtacagagatgaaaatgaagatttagttcttacacct
gaatttaaatctgcgttatcggacatgtttgaaattattgatttagatggaaatggtctc
ctgagcctggaagaatataatttctttgaaatgagatccagcggtgaaaaatgtgacgac
gatgcctgggaggtgtgcaaagaaaattttgaaacaaagaaaaatgagttaacaaggcag
gggtttatggatctaaatctcatggaggctaacgaccgagaaggagatcctagtgatctg
tgggtaacactgcaatccatggggtacaacaaagctcttgaaatgactgaggcatgccca
tttgttattgaagtctatgctgaaaaatgcaaaccacggcttaaaactgtgagcctggaa
tccagcaacaagcagctgcagggggcagtttgtaaatcagcgaagctcaaaggggatgca
aagtctatggagggctatgaagatgtcattatctatacatacaaaaatgacactcacatc
acatcagtgatggaaaataagtctgatgagaaactgattttgcaagtcaacaatgaacaa
agtaaaaactgcatcagcagccgaggattgcacgtgttcgctgtagagctgctaccaaaa
tcggtcatggtctgtcaacatgtcatgccactaaacgaaaaacaagagtggatgtacaat
tgtgtgcaaagtatcttatcttaa
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