Xenopus tropicalis (tropical clawed frog): 100495072
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Entry
100495072 CDS
T01011
Symbol
ccdc155l
Name
(RefSeq) lymphoid-restricted membrane protein isoform X3
KO
K22595
protein KASH5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100495072 (ccdc155l)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
100495072 (ccdc155l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KASH_CCD
EF-hand_9
DinB
Zw10_N
DUF6530
Motif
Other DBs
NCBI-GeneID:
100495072
NCBI-ProteinID:
XP_017951000
Xenbase:
XB-GENE-22064061
UniProt:
A0A8J0SVC0
LinkDB
All DBs
Position
7:112404440..112426424
Genome browser
AA seq
548 aa
AA seq
DB search
MYKLQGTCWNPESEEGQLSDSKNATQGCLNGVPNSTSEEQLLDTAFEACDTEGRGEVTVF
QIIDYLKSVTDQPCDGDRLQHLCKMLDPEEQGRSLDLPTFRKVMSEWIASCCSDSDITET
VENIKSEKGSSLPCGVLEREAEHEGYGGDVNKFMGEHADFISKIRDLSFANKKLMDQKMK
LQKSLETADETNSHLLEEISEVKSKLKISQQAVNHSRSLSNELEDLKAYTKTLEDKIAAF
GSQKEELEKDNLSLCNQRQMLQEEMYNLLIDKENLKGNIDSLSAEKDNMGLQICEYESLI
SQKEMLLEEVLQREKRLLHEQLLQPNKENMPLNQSVSVKQLPLPVQSVHRELEEIQEQKI
RVKSELLSPICGIPQASGSNVLCPIQDTDMTSDDAWAVTELLLVQLKQGTEALIRSVHEM
TSSDQSVSYLYEQSGHFLLELNYLLELKNVWERQWGRLGRAVQLYTGKEAKEPDSEELPA
TEWLCTDTLHTSIVPCIQLQNKSSLWLTLILLGTLMFCPAWAGEHIWTVLKAEIWPHLDL
HYHSPPPV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtataaactgcaaggaacctgctggaatcctgaatcagaagaagggcagctatcagac
agcaaaaatgctactcagggctgtcttaatggtgttcctaattctacatcagaagagcag
ttgctggataccgcatttgaagcatgtgatacagaggggagaggagaagtaacagtgttt
cagatcattgactacttgaagagcgtaacagatcaaccttgtgatggagaccgactccag
cacctttgtaagatgctggatcctgaagagcagggaaggtccctagatttgccaaccttc
cgtaaagtcatgagtgagtggattgccagctgctgcagtgacagtgatattactgaaaca
gtggaaaatataaaatccgagaaaggctcatctttaccatgtggtgtacttgagagagaa
gcagagcatgaagggtatggcggcgatgtaaataaatttatgggagaacatgctgatttc
atcagcaaaatcagagaccttagctttgccaacaagaagctgatggatcagaaaatgaag
ctgcagaagagcttagaaacagcagatgaaacaaactctcacttactagaggaaatatct
gaagtgaagagcaaactgaaaatttcccagcaggcagtgaatcattcaagatctttaagc
aatgaattggaagacctgaaagcttataccaagactctggaagacaaaattgctgccttt
ggatcacagaaggaagaactggagaaggacaatttgtcactttgcaatcaaagacagatg
cttcaggaagagatgtataatctgcttatcgacaaagaaaacttaaaggggaatattgat
agccttagtgctgaaaaggacaatatggggctccagatctgtgaatatgaaagtcttatc
tcacagaaggaaatgcttctggaagaagtgcttcaaagagaaaagagactattacatgaa
cagctgttacagccaaacaaagaaaacatgcccttgaatcaaagtgtttcagtaaaacaa
ctgcccctgccagtacagtcggtacatagggagctggaggagatacaagagcagaagatc
agagtgaagagtgagctcctaagcccaatatgtgggatacctcaagcctcaggctccaat
gtgctctgccccatacaggacactgacatgacatctgatgatgcctgggctgtaactgaa
ttactgcttgttcagcttaaacagggcaccgaggctcttattaggtccgttcatgaaatg
acttcatctgatcagtcagtctcatatctgtatgagcagagcggccacttcctgctagaa
ctgaactacctgcttgagctgaagaatgtgtgggaaaggcagtggggcaggttgggcaga
gccgtgcaactgtacacagggaaggaggccaaggaaccagacagtgaggagctccctgct
actgaatggttatgcactgatactctgcacacttccatagtgccctgcatacaactgcag
aacaagagctcactatggctaaccctgatccttcttggcacactgatgttttgcccagcg
tgggcaggggagcacatctggactgtactgaaagcagagatatggcctcatctagacttg
cactaccattctccaccaccggtttga
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