Xenopus tropicalis (tropical clawed frog): 100495115
Help
Entry
100495115 CDS
T01011
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100495115 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100495115 (dhx36)
03012 Translation factors [BR:
xtr03012
]
100495115 (dhx36)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100495115 (dhx36)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100495115 (dhx36)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100495115 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
NPHP3_N
AAA_14
PhoH
RsgA_GTPase
NACHT
GASH
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
100495115
NCBI-ProteinID:
XP_002933292
Xenbase:
XB-GENE-960425
UniProt:
F7ETR2
LinkDB
All DBs
Position
5:116930350..116956056
Genome browser
AA seq
981 aa
AA seq
DB search
MSYEQRRGWGRGGRWGRGGRGRARGYSSQYESGSMENSGGEQREKPPPHLKGREIGLWHA
RRQGQRSKEKERQERAVVKMDESREQHITRLLNSVQAQNNNERPSCSDESWWATENERNS
VSTQLKQPAMPEEKDHAWDSEYAAEADEAGTDLDQQLKEELHEKRTNYKYLEMQKFREKL
PSYSMKEMIIKMINSNQVTVISGETGCGKTTQVTQFILDDHIKRGKGSSCYIVCTQPRRI
SAISVAERVAAERAEACGRGNSTGYQIRLESQMPRKQGSILYCTTGIVIQWLQSDPHLAN
VSHVVIDEIHERNLQSDVLMAIVKDLLTFRSDLKVILMSATLNAEKFSQYFDSCPMLHIP
GFTYPVKEYLLEDVIEMLRYMPKDSDRRPQWKKRFMQGRMMCTEKEEKEQLYRERWPEFV
RKLQRRYSESTIEALELADDEKVDLDLIAELIRYIVLKGEDGAILVFLPGWDNISTLNDL
LMSQVMFKSDKFIIIPLHSLMPTVNQTEVFKRPPPGVRKIVIATNIAETSITIDDVVHVI
DGGKIKETHFDTQNNISTMTAEWVSHANAKQRKGRAGRVQPGHCYHLYNSLRDSLLDDYQ
LPEIVRTPLEELCLQIKILKLGGIASFLRKLMDTPSRDTICLAINHLMELNALDKREELT
PLGFHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKLADARRKE
LSRNSKSDHLTVLNAFEGWEDAKWRGGRAERDYCWENFLSSNSLKMLSNMKGQFAEHLLS
AGFVSSRSPNDPKSNINSTNEKLIKAVICAGLYPKVAKIRPNFGKRRKMVKVYTKSDGKV
NIHPKSVNVEETEFHYSWLVYHLKMRTTSIYLYDCTEVSPYSLLFFGGDISIQKDKDQDT
IAVDEWIVFQSPARIAHLVKDLKSELDVLLKEKIEKPQPVDWKETKSRDCAVLSAIIDLI
TTQENQEEKSFGPCYQGGFYR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaacagcggagaggatgggggcgagggggacgatggggacgagggggacgg
ggcagagcaaggggctactcttcccagtacgagagcggctctatggagaattcgggaggt
gagcaaagagagaaaccgccgccgcatctgaagggccgggagataggtttatggcatgcc
cggagacaaggccagagaagcaaagaaaaagagaggcaggagagagctgtcgtaaaaatg
gatgaatccagggagcaacatattactcggctgctgaattcggtgcaggcgcagaataac
aatgaaaggccaagttgctctgatgaatcctggtgggccactgagaatgaacgaaacagt
gtttccactcaactaaagcagccagcaatgcccgaagaaaaggatcatgcgtgggattct
gaatacgctgctgaggcagatgaagcaggcacagatctggatcaacagcttaaagaagag
ctgcacgaaaagagaacaaattataaatatcttgaaatgcagaaatttcgtgagaagttg
ccttcctacagcatgaaggagatgataattaaaatgattaattcaaaccaagtgactgtc
attagtggagagactggctgtgggaagactacacaagtaacacagtttattctggatgac
catatcaagagggggaaaggttcttcttgctacattgtttgtacgcagccaaggaggatt
agtgccatatcagtagcagaacgagtggcagcagaaagagcagaagcctgcggaagaggg
aacagtactggatatcagatccgccttgaaagtcagatgccacggaaacaaggttctata
ttatactgcacaactgggattgtgatacagtggctccagtcagacccgcacttggccaat
gtcagccatgttgttatagatgaaatacacgagagaaacctccagtctgatgttcttatg
gcaattgttaaagatcttctaacctttcggtcggatttgaaagtcatattgatgagtgcc
actctgaatgcagagaagttctcacagtattttgacagctgtccaatgctgcacattcct
gggtttacctaccctgtcaaagagtacttacttgaagatgttatagaaatgcttaggtac
atgccaaaggatagtgaccggaggccccagtggaagaaacgatttatgcaagggcgtatg
atgtgtacagagaaggaggaaaaggagcagctctacagggagcgctggcctgaatttgta
cggaaacttcagagaagatactctgaaagcactattgaagctttggaacttgcagatgat
gaaaaagttgaccttgaccttattgcagaactcataaggtacattgttctaaaaggagag
gatggagcaatcttggtgtttctgccaggatgggacaacattagcaccttaaatgatttg
cttatgtcacaagtgatgttcaagtcagataaattcatcattattcctttgcattcattg
atgccaactgtaaaccagacagaggtttttaaaaggccaccaccaggagtgaggaaaatt
gtaattgccaccaacattgcagagacaagtattaccatagatgatgtggtgcatgtaata
gatggaggaaaaataaaagagactcactttgacacacaaaataacatcagcacaatgact
gcagaatgggttagccatgccaatgccaagcaaaggaaaggtcgtgcaggcagagttcaa
cctggccactgctaccacctgtataacagccttcgggatagtcttttggatgactatcaa
ttaccagaaattgtgaggacaccattggaggaactttgcctccagatcaagattttaaag
cttggtggcattgcctcttttttgaggaaactaatggataccccatctagagatacaata
tgtctggcaatcaatcatcttatggaattgaatgctctagataaacgtgaagaattaacc
ccattggggtttcacttggcacgattaccagtagaaccacacattggcaagatgatcctg
ttcggagcccttttctgttgcctagatccagttctcaccattgcagcaagcctcagcttt
aaagatccatttgtcattccattgggaaaagagaaattggctgatgcaaggcggaaggaa
ttatccaggaattcaaaaagtgaccatctgacggtgctaaatgcattcgaggggtgggag
gatgccaaatggcgtggaggcagagcagagagagactattgctgggaaaactttctgtct
tctaactcattgaagatgctgagtaacatgaaaggacagtttgctgaacacctacttagt
gctggttttgtgagcagcaggagtccgaacgaccccaaatcaaatatcaattccactaat
gagaagctcattaaagctgttatttgcgctggtttatatccaaaggtagcaaagattcgg
ccaaactttggcaaaaggcggaaaatggtaaaggtgtatacaaagtctgatggcaaggtt
aacattcacccaaagtctgtcaatgtggaagaaacagaatttcactattcatggcttgtc
taccatctgaagatgagaactactagtatttatctatacgattgcactgaagtctcacca
tattcactgcttttctttgggggagacatttcaatccagaaagacaaagatcaggatact
attgctgtggatgaatggattgtgttccagtcccctgcaaggattgcacatctagtgaag
gatttgaaatcagaacttgatgtcctgttaaaagagaagattgagaagcctcaacctgtt
gactggaaggaaacaaaatccagagactgtgctgtcctttctgccatcattgatctcata
accacacaagaaaaccaagaagaaaaaagttttggcccttgttaccaggggggcttttat
aggtga
DBGET
integrated database retrieval system
