Xenopus tropicalis (tropical clawed frog): 100495319
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Entry
100495319 CDS
T01011
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X3
KO
K24058
PDZ domain-containing protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100495319 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100495319 (pdzd2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100495319
NCBI-ProteinID:
XP_012823010
Xenbase:
XB-GENE-6044665
UniProt:
A0A8J1IYL0
LinkDB
All DBs
Position
1:200772579..200933313
Genome browser
AA seq
2360 aa
AA seq
DB search
MLRRIKRKAPLPPSHGSKSSASEPKAASSSHPSVRTTQNGKRTRKFGVISRTGKESKDSE
EAVQENGHYSPMEVDGSHSADEALGNDGDKQRTSRSSDADVQHGYQFPNGDCSDSRSNDH
PARNEGCCIWKMHMLKGADGLGIQITGGRGSKRSPHGIVVAHVEEGGSADRDGRLKAGDE
LLMINGQSLVGLSHQEAVALLRSSMGIVQLVVASRESSNVDFCKYPSTSLPDLVSASSAQ
DVGASSDDKENEEPYVEEGQDYGTSPSHQAAESETDKFQEKGSSEVPKGVCRSPTLGNSL
LKYRSRSQGSGSRLESVGEDDELTVANGDLYRDNGDKISRGGRKHSLPQQLDSVGSRQDY
NIVKKTTRSLSTVQVESPWRLAQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVK
TIFSNGAAAADGRLKEGDEILEVNGESLQGLTHQEAIHKFKQLKKGVVTLTVRTRLRSPS
LTPCPTPTMMSRSSSPNSNISLGTSMPGSEDGDSTSGSRKGPGPKDRIIMEVTLNKEPGV
GLGIGACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAI
LSECGPGPVSLIISRHPNPKVSEQEMDEVITRTTHRESKDSFHSMGLHLKSPSPACKPKH
GDGPTSLSWTMKRFLEPASRQGSVSSEAELSQYFSQDAPSHSSFSDTVATGSSDEEQLRP
ASGSNSLDDNSAPPCAANAKECGAKAECCIPASHRNGNIPSPCNKHIVSTRQSSLNSSPQ
SIRSPLLRQRRIVSYEDEDGSEDGDISRKDEGNYKDHLKKNADEDSGIVMSTLDVDEEIP
DHNLPVKCASEAGTSLCGSSVESEDSSVEHMVDSPFFAIKSFDYSAKADARPCSLALKEP
TEGPIENKRSPKLEHKAVTRVKSMMSIEYPSSPKPKAEESCLPSKPTKPLPLVKKPEGSE
HSGKCITDTVQLFCSEYESVGLDLEIKESPLSVIITGLRPAREGEKDSVGKLAAGDEIIS
INGIQVSEMSYQQTCDFIQCLPSSVTLGVRKPLSAVDRLSHIIMASGGDQQGPVEQVEIL
RQENSQCKGPQHTADCSTPAKVTIEAGNSLTIQCLEAGNDSTVTNIDDFINELDFSGAPS
CDFAKDSNTTEEMEACVASGQGNRVDAETEEAKTELCSSITNFDESTSQSENILAFSVLD
SLSMEKKFAVDKSCLSSYSRNFSSLTEEDFSLSDQILSSSLDLPISMYVTAEDSDSESFL
DSTSDMISSLQNQSCMSELQTATDSEEEQIEICCDIKKGDSGAHQFYDVHQLYPAATLSE
TPKDLPDERCGGNTLPGFGHYTSVDRVTVENIVNSGHPDASPTMSLLNNDSQELPCRSEI
SLNDYSALQVQDPMTLGVKDNSTDVHNVGLVPLSEGNVYRCHLGPLDSGENMSAVEETID
SHVIPSCTIVDPSEDEKCVTRSSMEPEVCPQEASCANTNEGPITNCTVSTSNVQVKRETL
PEGTTKKSPATRNCNLDMYKPNVPLSKLHTDIKTTLKSSLDILNTQVSKPGPKLKGLSIK
SKNKEQAQNHPAKADDFRKLSPQPSPKLLAKRASMADGSTAARDRAVRSPVMTKKPEHKT
GLSVQSVDSKASANVSANSSTCSSKNDKMSPFSRRTGKCANDKSKDEGFSLRVNSSECPN
KTITSSDSGTKELIEDITAERVPQQMATEGPETHDIRRTFIEVKLSSALPHALTSATRRQ
DGSDKANILTNDHFANVYMSPRINNKSIVCKPVTRTYSMPAHLPIFMDDEGTQTKGQNHC
LISQGSVDCVLEKYLHAGNNSPAVAQNQLKSKLPTQDGQVSNEKYVSRSEIMRSIRRNYY
YELNWCHDPLSSLTVKQRIKSFENLAHFDKTVMKVIDMNHSPFSSKPPICRRSSGSVPSE
GSLHDASRYLRRSLSSCCDSHSEVTLAAPIETTPPSVALAVIEKSASDNITQTPVNEESR
TEKKESSPPAAQIRKNKTSSSHIRPSLSRSKIRELRALSMPDLDKLCTDDFTVEPKAPQF
KTELEIIPARLCDLPGQNMEPASSNLSNTGLMGCSLSGTATDLDESRPDGTLSRKSWAIS
LEQLMVSTQDQQNLQAVLTSVSSRSDIISLIQEIKTQSEKREGVFFVVLNKEEGTGLGFS
IAGGIDLEQKSVTVHRVFAKAVASQDTMIEKGDGILSINGCSLQGAAHGYALNALHGAKP
HRQAVVVIQKERDGEKLSRLDASRGRHTTSGKDVSMTALAGGSVDLTDTMCVELNKTSAG
LGFSLDGGKASIYGDRPLFIKRIFKGGAAEQAGKIQAGDEIIAIGGKYLTGLMHYDAWNI
IKAVPEGPVQLLIRKHRTAV
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgttacggcgcattaaacgtaaagctccccttcctccatcacatggcagtaagagtagc
gcgagtgaacccaaggccgcctccagctcacacccgagtgtcagaaccacacaaaatgga
aagaggaccaggaagtttggggtcatctccaggacgggcaaggagagcaaagacagcgag
gaggccgtgcaagagaatggacattactcccccatggaggtcgatggctctcattctgcc
gatgaggctttggggaatgatggggacaaacagaggacatctcgaagctctgatgcagac
gtgcagcatggataccagtttcccaatggtgactgctcggactcaagatcaaatgatcac
ccagcacggaatgaaggctgttgcatatggaagatgcacatgctgaagggcgccgatggg
ctggggattcagatcactggtggccgaggctcaaagaggtccccacatggaatagtggtg
gcacacgtggaagaaggtggatcagctgacagggacggcagactgaaagccggggatgag
ttattaatgataaatgggcagtcgctggttggactctctcaccaagaagctgtggctctt
ctacgttccagcatgggcatcgttcagctggtagttgctagcagggagagctccaacgtg
gacttctgtaaatacccatccacgagtttgccggacctggtcagcgcctcatctgctcag
gatgttggtgcttcctctgatgacaaggaaaatgaagaaccatatgttgaagaaggacag
gactatggcacgtccccctcccaccaggcagctgaatcagaaactgacaaattccaagag
aagggatcttcagaagttcccaaaggtgtctgccggagccccactctgggcaatagtctc
ctgaagtacagaagccgctcccaagggagcggcagccgcctggaatctgtcggggaagac
gatgagcttacagtggccaatggagatttatacagagataacggagataaaatatcacgt
gggggtcgaaagcattcactgccgcagcagctggactccgtgggatcaagacaggattac
aacattgtgaagaagacgacgagatctctaagcaccgtacaagtggaatctccttggaga
cttgcccagccatcgatcatctctaatattgtgctaatgaaaggccaaggaaagggcctt
ggtttcagcatagttggtggccaggactcggccagagggagaatggggatctttgtaaag
acgattttctccaatggagcagcggctgcagatggaaggctaaaggaaggggacgaaatt
ctggaggtcaacggggaatccttgcaggggttaacccaccaagaagcgatccacaaattc
aagcaactgaaaaagggtgttgttaccctgacggtacggacgcgactgcgcagtcccagc
ctcaccccttgtccgactcccaccatgatgagccgttccagctccccaaactctaatatc
agccttggaacttcaatgcctggttccgaagatggagattctacctccggttctcgtaag
ggtccggggcccaaggataggatcattatggaagtgacacttaataaagaacccggagtg
ggtttgggaatcggcgcctgctgccttacactggaaaacagctccccggggatctatatc
cacagcttagccccgggatctgtggccaagatggacggcagactcagccgcggagatcaa
atcctggaagcagactcagtgagcctcagacatgctgcacttagcgaggcgtacgctata
ctaagcgagtgcggcccgggaccagtaagccttattatcagccgccacccaaatccaaag
gtgtcggagcaagagatggacgaagtaatcacccgtacgacgcaccgcgagagcaaggac
tcctttcattccatgggtctccatttgaagagtccttctcctgcctgcaaacccaagcat
ggagacggtccgacatccctcagctggacaatgaaacgcttccttgaacctgccagtcgg
cagggctccgttagttcagaagcagagctgtctcagtacttctctcaggatgctcccagt
cactcgtccttctccgacactgtggccaccggctctagcgatgaggaacagctgcggccg
gctagtgggagcaactctctggatgacaactcggctcctccatgtgctgccaatgctaag
gaatgtggagcaaaggcagagtgctgtattccggcctcccacagaaatggaaatattccc
agtccctgcaacaagcacattgtcagcaccagacagtccagtctgaacagcagcccacag
tctatacgcagccctctcctgcgccagcgccgcatcgtaagctacgaggatgaggatggc
agcgaggacggtgacataagtaggaaagacgaaggcaactataaagatcatttaaagaaa
aacgctgatgaagattctggtattgtcatgtcaactctggatgttgatgaggaaataccg
gaccataacctgcccgtgaaatgtgccagcgaggccggaacctccctctgcggcagctca
gtggagtctgaagacagttccgtggagcacatggtggattctccattctttgccatcaaa
tcttttgattactctgccaaggctgacgctcgcccctgcagtttggcactcaaagaaccc
acagaggggccaatagagaataagaggtctcccaaactggagcacaaagctgtcactcga
gttaaaagcatgatgagcattgaatatcctagctctccaaaacccaaggcagaagagagc
tgcctcccatcaaagccaacaaaaccccttccgttggtcaaaaagcctgaaggttcagag
cattctgggaagtgcatcaccgacactgttcagctgttctgcagcgagtacgagtccgtg
gggctggacctggagattaaagaaagtcctttatctgttataataaccgggttacggccg
gccagagaaggggaaaaggattctgtgggaaagttagcggctggcgatgagattatatcg
attaatggcattcaagtgagcgagatgtcctaccagcaaacttgtgattttatccagtgc
ttgccttcatccgttacactgggagtgcggaagccgctgtcagctgttgataggctgtca
cacatcatcatggcctcaggaggagaccagcaaggacctgtggaacaagtggagatcctc
aggcaggagaacagccagtgtaaagggccccagcacacagcagattgctcgactccagcc
aaagtgactattgaagcagggaattcactgacaatccagtgcctggaagcaggaaatgac
agcaccgtcactaatattgatgattttattaatgagcttgatttttctggagctccttca
tgtgactttgctaaagattccaacaccacagaggaaatggaagcttgtgtggcctcggga
caagggaaccgtgtcgatgcagaaacagaagaagccaagacagagctgtgtagcagcatt
acaaatttcgatgaaagcacaagccagtcggagaacattttggcattttctgttttggac
tccctgtcgatggaaaaaaaatttgcagtggacaaaagctgcctaagtagttattcccgc
aatttcagcagcttgaccgaggaggatttctcattgtcagaccaaattttaagcagttcg
ctcgacctgcccatctctatgtacgtaacggcagaggattccgactcggagtcgtttctt
gattctacaagcgacatgatctcctcccttcagaaccagtcttgtatgtcagaactacaa
accgccacagattctgaggaggagcaaattgaaatttgttgcgatattaagaaaggagac
agtggagcacatcagttctatgacgtgcaccaactgtacccagcagcaaccttaagtgaa
accccaaaagatttgccagatgagaggtgtggtgggaacactcttcctggttttggtcat
tatacttcagtagatcgggtaaccgtggaaaacatagtcaatagtggtcatccagatgct
tcacctaccatgtctttgttaaacaatgactctcaggaattaccttgccgcagtgaaata
agtttaaatgactacagtgccttacaagtgcaagatcccatgacattaggagtaaaagac
aattctactgatgttcataacgttggactggtgccactctctgaaggtaatgtatatcgt
tgccacttggggcctttagacagtggagaaaacatgtcagcagttgaagagaccattgac
agtcatgtcatcccctcatgcactattgtggatccgagcgaagatgagaaatgtgttacc
agaagcagcatggaaccagaggtgtgccctcaagaagctagctgtgccaacacaaatgaa
ggccccattacaaattgtactgtttctacatctaatgtccaggtgaaaagggaaacgttg
ccagaggggaccactaagaaatcccctgcaaccagaaattgtaatctagatatgtataag
ccaaatgttcccttgtcaaaacttcacactgacatcaagacaacattaaaaagcagcctt
gatatattaaacacacaggtatccaaaccaggacccaaacttaaaggtcttagtatcaag
agtaaaaataaagaacaggctcaaaatcatcccgcaaaagctgacgacttccgtaaactc
tcaccgcagccttcacctaaacttcttgcaaagagagcttccatggccgacggctccacc
gcagcaagagaccgtgcagttcgaagtcctgtcatgacaaagaaaccagaacacaaaact
gggctctctgtacagagtgttgattccaaagcaagtgccaatgttagtgccaatagctct
acatgtagcagtaagaacgataaaatgagtccgttcagcagaagaactgggaaatgcgca
aacgacaagagcaaggatgaaggattctcattaagggtaaattcttctgagtgccctaac
aaaaccattaccagctcagacagtggcaccaaggaacttatagaggatataacagctgag
agagttcctcagcaaatggcaactgaaggaccggaaacccatgatattcgaaggacgttt
attgaagtaaagctttcctcagcacttccacatgcacttacttctgccactagaagacag
gatggcagcgataaagcaaacatcctgaccaatgaccattttgcaaatgtatatatgtct
cctaggattaacaataagtccattgtgtgtaaaccagtcactaggacatattccatgcca
gcccaccttcctatcttcatggatgatgagggaacacagacaaagggacaaaatcattgt
ctcatttctcagggctccgttgactgtgtgcttgaaaaatatctccatgcggggaataac
agccccgcggttgcacagaatcaactaaaatccaagctgccaactcaagacggtcaagtg
tccaatgaaaaatatgtttcccgcagtgaaattatgaggagtattagaagaaactattac
tatgaactgaactggtgccatgaccccctttcttctctcactgtaaagcaaaggattaaa
tcatttgaaaacctggcacattttgataaaacggtcatgaaggttatagacatgaaccac
tccccctttagttccaaaccacccatatgcaggaggtcttctggttctgtgccatcagaa
ggaagcctccatgatgcctccaggtatttgaggcgcagtttaagttcatgttgtgacagc
cacagtgaagtgaccttagcagcaccaatcgaaacaacccctccaagcgtggccttagca
gtcattgagaagagtgccagtgataacataacacagactcctgtaaatgaggaaagtaga
actgagaaaaaagagagctcccctccggcggcacagataaggaaaaacaaaacatcttca
agccacatcagaccgtctctgtctcgctctaagatacgagaactgagagcgctgagcatg
ccagacctggataaactctgcaccgatgactttacagttgaacccaaggcaccgcagttt
aaaacggaacttgagattatacctgccaggttatgcgacttacccgggcagaatatggag
ccggcatcatcaaacctttctaacactggcctcatgggttgtagcctatcaggaactgcg
acagacctggatgaaagtagaccagatggaacgctttcccggaaatcatgggcaataagc
ttggagcaactcatggtctcgacccaggatcagcagaacctgcaagctgttttgacttcg
gtgtcgtccagatcagatatcataagtctgattcaagaaataaaaacgcaaagcgagaag
agggaaggcgtcttctttgtggttctgaataaggaagaagggaccggcctgggcttcagc
atcgcaggagggatagacttggaacagaaatcagtcactgtgcaccgggtgtttgccaag
gctgtggcttcccaggacacaatgattgagaaaggagacggcatcttgtctataaatggc
tgctccttacagggcgccgctcatgggtacgcgctgaacgccctgcacggggcaaagccg
cacagacaggcagtcgttgtgatacagaaagagcgagatggagagaagctttcccggcta
gacgcttctagaggaagacacacaacatctggaaaggatgtgtctatgacggcattagca
gggggcagtgtggatctgacggatacaatgtgcgtggagctgaacaaaacctccgccggc
ctgggcttcagcctggatgggggaaaggcctcaatatacggggacagacccctcttcatc
aaacgcatatttaaagggggcgctgctgagcaagctggcaaaatccaagctggtgatgaa
ataatagccattggcggaaagtacttgacaggcctgatgcactacgacgcctggaatatc
atcaaagccgtccccgagggccccgtacagttgctcatcagaaagcacaggactgccgtt
taa
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