Xenopus tropicalis (tropical clawed frog): 100495358
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Entry
100495358 CDS
T01011
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100495358 (snx13)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100495358 (snx13)
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GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
100495358
NCBI-ProteinID:
XP_002933347
Xenbase:
XB-GENE-6037458
UniProt:
A0A6I8S7J4
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Position
6:complement(37795337..37868357)
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AA seq
975 aa
AA seq
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MIPKEPCLDERNRKEDVVNCILKASLSVWGWGSLGVVLFLIKFGPFAIFYFAFYILCFVG
GGFVVTILFGKTSSERYLERCEHSFLPSTSTGIPKCLEEIKREPRTIKIDRRITGASMID
EPLQQVIQFSLRDYVQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEIDWQPYFTTRL
VDDFATHLRVFRKAQQKMAEKEDQKKDKAEDFIDTFFEVEVEMEKCVCRDLVCTSSKDEE
GCLKDLCEVLLYLLLPPGDFQNKIMRYFVREILSRGILLPLINQLSDPDYINQYIIWMIH
DFSCNYEAFMNVIKLSGNISELEAVRDKAAEELQYLRSLDTVGDDINTIKNQINSLLFVK
KVCETRIQRLQSGKEIDTVKLAANFGKLCTVPLDKILVDNVALQFFMDFMQQTGGQAHLF
FWLTVEGYRVTAQQQLEVLHSRQRDGKHQTNQTKGLLKAAAFGVYEQYLSEKASPRVHID
DYLLAKLEEKLNSEDPTPEIFDDIQRKVYDMMLRNERFYPSFRQNTLYIRMLAELDMLKE
PSFKGSDDGDGESFNGSPNGSIHSSLDDLTSSDELLQINAFISDTGVCNEHGKTYALYAI
TVQRRALDSMEDMWKTYRRYSDFHDFHMRITEQFENLASLLKLPGKKTFNNMDKEFLEKR
RNDLNAYLQLLLNPEIVKASPALAHYVFDFLENKAYSKGKGDFARKMDTFVNPLRNSMRN
VSNAVKSIPDSLAEGMNKMSDNMGKMSEKIGQDIKHSFFKAPILVPKTDAFPENYRVSAQ
LDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDHVQ
YMTSPDQVADYVKQFRESFWPNGILAEASLRRDRSIRMRTRVAAKTKLLEIMPDELKHII
GAETTRKGILRVFEMFQYNQLNRRLVYVFLEGFLETLFPQYKFRELFYKLHSRSERMQKY
KLRPQPSQAPSLQKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaaggagccttgtcttgatgaaaggaatagaaaagaggatgttgttaactgc
attttaaaggctagtctttccgtatggggatggggaagtcttggtgttgtgctgttcctg
attaagtttggaccttttgctatattctactttgccttttacatactatgctttgttgga
ggaggttttgtagtgactatcctttttggcaaaacaagttcagaacgatacttagaaagg
tgtgagcattcctttctaccatcaacatcaactggcattcctaagtgtttggaagaaatt
aaacgtgaacctagaacaattaagattgacagaagaataacaggtgccagtatgattgat
gagcccctgcagcaggtgatacagttttcattgagggattatgtccagtactggtattac
acactaagtgaagatgaatcttttctccttgaaatcaggcagactgtccagaatgcgctt
gtacagttttctactaggtcaaaagaaatcgactggcagccttattttaccacccgttta
gttgatgactttgccactcatcttcgagtgttcagaaaagcgcaacaaaaaatggcagaa
aaggaagatcaaaagaaagataaagctgaagattttatagatactttctttgaagttgaa
gttgaaatggaaaaatgtgtatgtcgtgaccttgtctgcacttcatccaaagatgaggaa
gggtgcctaaaggatttatgtgaagttttactgtatttattgctacctcctggagacttc
cagaataaaatcatgcgatattttgtgagggaaatcctttcacgaggaattcttcttcct
ttaataaaccagctcagtgatcctgattatattaatcaatatatcatttggatgattcat
gacttcagttgcaactatgaggcctttatgaatgttattaaattaagtggcaatataagt
gaattggaagctgtgagagacaaagctgcagaagaactgcagtatcttcgttctttggat
actgttggagatgatatcaacactataaaaaatcagataaacagcttactctttgtaaag
aaagtatgtgaaacaagaatacagagattgcagtcggggaaagaaattgacactgtgaag
ttggctgcaaactttggaaaactttgcacagtccccttggacaaaattcttgtagacaat
gttgcactacagttttttatggattttatgcagcagactggagggcaagcacatctcttc
ttctggctgacagtagaaggataccgggtcacagcgcagcagcagcttgaagtgttgcac
agtcgacaaagggatgggaagcaccaaaccaatcaaacaaaaggcttgttaaaagccgca
gcatttggagtgtatgaacagtatttatctgagaaggcatcacctagagtccatattgat
gactacttattagcaaagcttgaagagaaattgaacagcgaggacccaacacctgaaatt
tttgatgacatacagagaaaggtttacgacatgatgctgcgcaatgagagattttaccca
tccttccgtcagaatactctctatatccgaatgctggcagagctcgacatgttaaaggag
ccaagttttaaagggtcagatgatggagatggagaatctttcaatgggtcacctaatgga
agtatacattcgtctctagatgacctgaccagctccgacgagctattacagattaatgct
tttatttctgacactggagtttgtaatgaacatggcaaaacctatgcactgtacgccatc
actgtccagcggcgagccttagacagcatggaagacatgtggaaaacgtatcgccgttac
agtgactttcatgacttccacatgcgaatcactgagcagtttgagaacctcgcaagcctt
ttgaagctgcctgggaagaagacgtttaacaatatggataaagaatttctagagaagcgg
agaaacgacttaaatgcatatttacagctgctactgaatccagagatagtgaaagcgagc
cctgcacttgctcattatgtatttgacttccttgagaacaaagcctacagtaaagggaaa
ggagactttgcaaggaagatggatacatttgttaatcctctgaggaactcaatgaggaat
gtctccaacgcggttaagtcaatccctgatagtttagctgaagggatgaataaaatgtct
gataacatggggaaaatgtcagaaaaaattggacaagatataaaacactccttctttaag
gctccaattcttgtaccaaaaactgatgcatttccagaaaactatcgagtttcggcacaa
ctggatgacaatgtcgacgacaatattccactgagagtgatgcttcttcttatggatgaa
gttttcgacttgaaagaaaggaatcagtggttaagaagacaaattacaagccttctccag
cagctcataagagcaacttatggagacaccatcaatagaaaaattgttgatcatgtgcag
tatatgacgtccccagaccaagtagcagattatgtaaaacagttcagagaatcattttgg
ccaaatggaatattagcagaagcatctctacgcagagaccggagtattcgaatgagaact
agagtggcagcaaagaccaagctgcttgaaataatgccagatgaactaaagcatatcatt
ggtgctgaaacaactcggaaaggcatactgcgggtgtttgaaatgtttcagtacaaccag
ctgaacaggagacttgtgtatgtttttttagagggcttcctggaaaccttatttccacag
tataagttccgcgagcttttctataaactccattctcggtcagagcgcatgcaaaaatat
aaactgagaccacagccttctcaagcgccttctttgcagaaaaggtga
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