Xenopus tropicalis (tropical clawed frog): 100495447
Help
Entry
100495447 CDS
T01011
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100495447 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100495447 (dmxl1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100495447 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100495447 (dmxl1)
RAVE complex
100495447 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
100495447
NCBI-ProteinID:
XP_002931778
Xenbase:
XB-GENE-948750
UniProt:
F6U5F0
LinkDB
All DBs
Position
1:complement(170638811..170717673)
Genome browser
AA seq
3013 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLQDQSITAYASGCDIVILGSDFERLQVIPGVQHGNILV
GCVDCSMQQARIAASYGNVICIFEPVNLLQQKTSQSDQSVRTQWQKSGQIVLDSVVHNLT
WDPTGTRLLTGSTGLQLWGNITLERLSCDDQQEKASVDHAEWNCIWQCKTAFSVHLMKFS
PDGEFFATAGKDDCLVKVWYNTESWHSAVTSPVTSPDKQGQGEVDFSFIYLAHPRAVNGF
SWRKTSKYMPRGSVCNVLLTCCKDNVCRLWAETLLPNDSLLSGDGFNLMAEPDSVNNNFK
RNSSSKERVQSALESNLKHFRRGRSRSLALVAHTGYLPHQQNAHNGHRNTPFHGNALCHF
HIAASINPATDIPLLPSITSMSLNETEEKSGPFVVHWLNNKELHFSLSIEVFLQQLRKNL
EQQSSEVSTDEANHAEENSDEETDEFSSEKREANGDKTVLNSPLIQLPASVIDHEIEILL
SEWNKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFSCRIPVAFPTGDANSLC
RSIVMYASTKNVDLAILQGKQKPPGMARSTSMLISSGQSKSSNSLKLSIFTPNVLMISKH
ADGSLNQWQVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNSLQS
PEQNVSSNCSEEDCSLSDHNSTPETCQDASAVYSELILWRVDPVGPLSFSGGVSELARLN
SLHVSAFSNVAWLPTLIPSHCLGAYCNSPSACFVASDGQNLRLYQAVIDAKKLLCELSNP
DISKYVGEVFNIISQQSTARPGCIIELDAITGLHGRKTQLLHVFQEDYILGNNKKNTGNS
GFTSDSETSQTGYSEKFYLVVIELTQEKRSNLHMWKLHLKSVPVSIEDQSGSDTSENAQP
IDDSFSSASGEKVQSPHTQRYQTCKANLQSTSKMTLSSEIVYSQELDLPDGVEIISVKPS
AGHLSSSSIYPVCHAPYLLATSCSDGKVRFWRCRMDSDLPLSPGDMENSITYMWEEWPLL
VEGGLQNGAVSVPGRPIEVSCAHTNCLAVAFKQTPSKSSNASQELLMHVSIFECESTGGS
CWILEQTIHLDELSTMVESGISIDNNLVAYNKHDVFLSSNKQLHPNTKHLVHLDWMSRED
GSHILTIGIGSKLLMYGQVAKKVQEQPCKEDFALQLWQTAKNTAHPRFVLLRCVDLVSSV
EGSLPLPVSLSWVRDGILVVGMDCEMHVYSQWQPFSKQVAASTDSYNGSTPSITNLVKQS
QSVGSGLNPPKKSMTRSMTSLAQKLMGKRTAFDLPLEMEDSGLFEAAHALFPTLPQYHPL
QLLELMDLGKVRRAKAILSHLVKCIAGEVVAINDNEPSYERRLRSLSISASGSTSRDPKT
FSKPDNVDYTEIDSIPPLPLHALLTADEESTFTSTVEKSSNHNNSNKSSNGTANDENYDE
LFQVPTLGPDDLTTMDSDDETTKPQVIDLSQYSPTYFGPEHSKVLSRHLLHSSLPGLTRM
EQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFFLAVRLHTFLTTSVPPAFRAQ
LSHQGLSTSHFAWAFHSVAEEELLGTLPAMQKGDPTWAELRAMGVGWWLRNTHNLRTCIE
KVAKAAFQRNNDPLDAAIYYLAMKKKAVIWGLYRSQKDAKMTQFFGNNFNEERWRKAALK
NAFSLLGKQRFEHSAAFFLLAGSLKDAVEVCLEKLHDIQLALVIARLYETEFEKSSAYKS
VLKRRVLGMEPHSKEPIVSNMHSDPFIRSMAYWILEDYSQALETLLKQLVRDEKDEACNL
SSSCDPSVFNFYNFLRTHPMLLRRHFGSSESSCTKMRITVENSLADKINLGERRLFFTTA
HAHLKAGCPMLALEVLSKMPKVVTKSKPLLRTSSLADTSKVTTPLSEIKEAGTSNTDWAN
SVVNGSLSSFDMSSDKQSSSVLLFDWSQPSTVIDDEPLELKWDSDGEDEESGLSMKDLKS
TQSTESTKQGTTGTSCSDSLSIDENDILSPSDDVIAAQLKFRACLKILTGELRTLSTGYE
VDGGKLRYQLYSWLERTVVALQQICDYNTSLEECTSGGAVELSREDSSENSLDCSATKHQ
RENYQRRQWLLKFQSLLRMFLSFCVLHGSHGGGLASVRMELILLLQESQQDTAILSSSQA
EQTSIPLLFACTASAKTVVANPLLHLCNLTHDILHAIINLDSPPHPDVHNHKIYVMHTLA
ASLSACIYQCLCGGQANSSSVQTNPFTGMAYQSVLLIHRQPLRTTSLDEAVIPNTSPTQW
PGISALLRLLNSAGEEAQPGLTILLCEILTAVYLSLFIHGLATHSSHELFCIVAHPLINK
MWSAVFGGGARIPSRGQLPVKPVIVSSPMDEGDKQSKRFRISTKIQPKENSSHFESPVVD
QGSSIFREKYIPPELSIWDYFIAKPFPPLSQNRLEYDSDESQGSDEEEEDDDDDVSLSDV
QLQEHSNANSYSWALMRLAMVQFVLQNLKNFYPLAGHELSDLPVNSPLCHAVVKTLQRWE
QVLLRRLEMYDGPPPDYINIPALEEAVSAGPAILRHKALLEPTNTPFKSKHSSALPVKRL
WQYLVKQEGIQETFIRNIFAKKRSPTETETDTGYTGSRARIIHKESDIITAFAVNKANRN
CIAIASSHDIQELDVSAILATQIYSWIDDEFETENKGADDFLVVHTRDDLSAVQGTTPYT
HSNPGTPINMPWLGGVQTGRGASVMIKKPINNVRRMASHPTLPYYLTGAQDGSVRMFEWG
HSQQITCFRSGGNSRVTRIRFNHQGNKFGILDADGHISLYQTNWKYSAATGAPPKPYLTW
QCHNKTANDFVFISSSSLIATAGQSNDNRNLSLWDTLVAPANSLIHAFMCHDSGATVIAY
APKQQLLISGGRKGFTCLFDLRQRVQKHHFQSHDSAVKAIAIDTTEEYFITGSAEGNIKV
WNLTTLNLMHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRYST
LNDLLKNDVKFVL
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacaggagccgtcaacccgggggataactgcttctccgtg
gggagcctgcaggatcagtccatcacggcatatgcatctggctgtgatattgtcattttg
ggaagtgactttgaaagattacaagttattcctggagttcagcatggaaatattttggtg
ggatgtgtggattgttccatgcagcaagcaaggattgcagcttcatatggaaatgtgatt
tgcatctttgaaccagtcaatcttttgcaacagaagacttcacaatcagatcagagtgtt
cgaactcagtggcagaagagcggacagattgtgctcgactccgttgtccataatttgaca
tgggacccaactggtactcgtctactaactggttctaccggacttcagctttggggtaat
attaccttagaaaggttatcttgtgatgaccagcaagagaaggccagtgttgaccatgct
gagtggaattgtatctggcaatgcaaaactgcgttttctgttcatttaatgaagttttcc
ccagatggagaattttttgctactgctggaaaggacgactgtctggttaaagtgtggtat
aatactgaaagctggcattctgctgttacatctcctgttacaagtcctgacaaacaaggg
caaggtgaagtagatttctcatttatctaccttgcccatcctcgagcagtaaatggattc
tcatggagaaagacaagtaaatatatgccaagaggctctgtttgcaatgttcttcttacc
tgctgcaaggacaatgtatgccgcctgtgggctgaaaccctcttgcccaatgacagcctt
ttatctggtgacggcttcaacttaatggcagagcctgacagtgtaaacaataactttaaa
agaaactcttctagtaaagaacgtgtacagagtgcactggagtcaaatttaaagcatttc
aggagaggtaggagtcggtctttggctcttgtagctcacactgggtatcttccccatcag
cagaatgctcataatggccatcggaacactccttttcatggcaatgctctttgccacttt
catatagcagccagcatcaatccagccacagacatcccactcctgccatctatcacatct
atgagtctcaatgagacggaagagaaaagtggaccttttgttgtacactggctaaataat
aaggagctgcatttttctttgtcaatagaagtctttcttcagcagctcaggaaaaaccta
gagcagcaatcctcagaagtcagcactgatgaagccaaccatgcagaggagaactcagat
gaagagacagatgaattctctagtgaaaaaagagaagcaaacggtgacaaaacagttttg
aattcaccattgatacaattaccggcatctgtcattgatcatgaaattgaaattttgctt
tctgaatggaataagaatgcagatatgctttttagcatccatcctgtggatgggtcattg
ctggtttggcatgttgattggttggatgaatatcagcctggaatgtttcgtcaagtacag
gtgtctttttcttgtagaattcctgtagcgttccctactggagatgcaaactcactgtgc
agaagtattgtgatgtatgccagcacaaaaaatgtagacttagccatcctgcaaggcaaa
cagaaacccccaggcatggcacgttctacatctatgctaatttcttcaggccaaagtaaa
tcctctaacagtttgaaacttagcatttttacgccaaatgttttaatgatatcaaaacat
gctgatgggtccctgaaccagtggcaagtcagctttgctgaggaatctgccttttcgact
gttctcagcatttctcacaaatctcgttactgtggacatcgttttcatctcaatgatcta
gcctgtcattctgtgttgccgttactgcttacaacatctcatcataattccttgcaatcc
ccggagcaaaatgtgtcatccaactgttcagaagaagactgttctctaagtgatcataac
agcacaccagagacttgccaagatgccagtgcggtgtacagtgaactcatcctctggagg
gtggaccctgttgggcctttatctttttctggtggtgtttctgaacttgctcgccttaac
tctcttcatgtttctgctttttccaatgtggcctggttgcccactctcatacctagtcat
tgtttaggtgcatattgcaattctccaagtgcttgttttgttgcgagcgatgggcagaat
ttaaggctgtatcaagctgtgattgatgctaaaaaacttttgtgtgagctgtccaaccca
gatatttctaaatacgttggagaagtgttcaacatcattagtcaacaatcaactgctaga
ccaggatgcatcatagaattagatgcaattactggcctacatggcagaaaaactcagctg
cttcatgtctttcaagaggattacattttaggaaataataagaaaaacactggaaacagt
ggctttacatcagattctgaaacctcacagactggatactctgaaaaattctaccttgta
gtaattgagttgactcaagaaaagcgatcaaatctgcacatgtggaaactgcacctcaaa
tctgtgccagtgtctatagaagatcaatctggatcagacacttctgaaaatgctcagcca
atagacgattcattcagttctgcttctggagaaaaagtccagtcacctcacacccagaga
tatcagacctgcaaagccaatcttcagagtacaagcaagatgaccctttcatctgaaatt
gtttacagccaagaattagacttaccagatggagtagaaataatcagtgttaaaccatca
gcaggtcatttgagtagttcttcaatttatccagtttgtcatgctccttacttactagca
acatcttgctctgatggcaaggtgaggttctggcgctgcagaatggattcagatctgcct
ctttcaccaggtgacatggaaaacagtattacttatatgtgggaagaatggcctttgctt
gttgaaggtggccttcagaatggtgcagtgagtgtaccagggagacctattgaagtaagc
tgtgcccatacaaattgtctagctgtagcatttaagcaaacgccaagtaaaagtagtaac
gcatctcaagaattattaatgcatgtaagtatttttgaatgtgaatctactggtggttca
tgctggattctagaacaaaccattcatctggatgaactgagtacaatggttgaatctggc
ataagtatcgacaataaccttgtagcttacaataagcatgatgtttttttatcttctaac
aagcagcttcacccaaacacaaagcatttggtccatttagactggatgtcaagggaagat
ggttctcatatattaactataggtataggttcaaaacttctaatgtatggccaggttgca
aaaaaggtacaagagcaaccttgtaaagaagattttgcattgcagctgtggcaaactgca
aaaaacacagctcatccgagatttgtacttttaagatgtgtggacttggtgtcttctgtg
gaaggatctcttccactgcctgtttctttgtcctgggtacgtgatggaattcttgttgtt
ggaatggactgtgaaatgcatgtctactctcagtggcagcctttctcaaaacaagttgca
gcaagcacagactcttataatgggagcactccgtctattacaaacttagtcaaacaaagc
cagtctgttggatctggtcttaaccctccaaaaaaatcgatgactagatcaatgacaagt
ttagcacaaaagctcatgggaaagagaactgcatttgaccttcccttagagatggaggac
tcgggcctttttgaagccgctcatgctttgttcccaactttacctcagtatcatcctttg
cagcttttagagctcatggatctaggtaaagtccgcagagcaaaggctattctatcacat
ctggtaaaatgtattgctggggaagtggtagctattaatgacaatgaacctagctatgag
cgcagactaagatctctttcaataagtgctagtggaagcacttctcgagatcctaaaact
tttagcaaaccagataatgtagactatacagaaatagattctattcctccactgccacta
catgcgctactcacagcagatgaggagtcaacatttacatccacagttgagaagtcgagt
aatcataacaactctaacaaaagcagtaacggtactgctaatgatgaaaattacgatgaa
ctgtttcaagttccgacactgggacctgatgatttgactacaatggattctgatgatgaa
actacaaagccacaagttattgatctttcccaatatagtcccacttattttggcccagaa
cattctaaggtcctctctagacatttgcttcactccagtcttccaggcctgactcgcatg
gaacagatgtctcttatggctctagctgatacaattgccacaactagtaccgatattgga
gaaagtagagaccgcagccaaggtggggagacccttgatgaatgtggactgaagtttttt
ctggctgttcggcttcatacgtttctcactacatctgttcctcctgcatttagggctcag
ctttcccaccaaggcttgtctacaagtcattttgcctgggcctttcattctgtggcagag
gaagaactgcttggcacacttcctgccatgcaaaaaggagaccctacctgggcagaactg
agagcaatgggagtaggttggtggttgaggaacacccataacttgcggacatgtattgaa
aaggtagccaaagcagcttttcagagaaataatgaccccttagatgcagccatatattat
cttgcaatgaagaagaaagctgtaatatgggggttatacaggtcgcagaaagatgcaaaa
atgacacaattttttggaaataattttaatgaagagagatggaggaaagctgctttgaaa
aatgctttctcacttcttggcaaacagcgttttgaacattctgctgcttttttcctttta
gctggctccttaaaagatgctgttgaggtgtgccttgaaaaactgcatgatatccagtta
gctctagtgatagcaaggctttatgagactgaatttgaaaaatcttcagcctataaatct
gttctaaaaaggagagttttggggatggagcctcatagcaaagaacccatagtttcaaat
atgcattctgatccattcatacgaagcatggcctactggatcttggaggattatagtcaa
gcactggaaaccttgctaaaacagctagtgagagatgaaaaagatgaagcatgtaacctg
tcatctagttgtgatccatctgttttcaatttctacaattttcttcgtacacatcccatg
ctattaagaagacattttggatcctctgaatcttcctgtaccaaaatgaggattactgtg
gaaaatagcttagccgacaaaattaacttaggggagagaagactgttttttacaactgcc
catgctcatttaaaagctggctgccccatgcttgccttggaagtgttgtcaaaaatgccc
aaagtcgtaacaaaatcaaaaccgctacttcgtacgtcaagtttagcagatactagcaag
gtcacaacaccattgtctgagataaaagaagcaggaaccagtaacactgattgggcaaac
tctgtggtcaatggatcattgtcttcttttgatatgtcatcagataagcaatcaagctct
gttcttttgtttgactggagccagccttcaacagttattgatgatgagcccctggaatta
aaatgggacagtgatggagaagatgaggaatctggcttgtcaatgaaagaccttaaatct
acacaaagtacagagagtacaaagcaagggacaactggcacaagctgctctgattcctta
agcattgacgaaaatgatatacttagtccttctgatgatgttatagctgcacaattgaaa
tttagagcatgtctgaagattcttactggagaactgcggactttgtccacaggctatgaa
gtggatggaggaaagctgagataccagttgtacagctggcttgaaagaacagttgttgct
ctgcaacagatatgtgattacaatactagtttagaggagtgtacgtcagggggagctgtg
gaactttctcgcgaagacagttctgagaattcattggattgcagcgctacaaagcaccaa
agagagaattatcagagacgacagtggcttctcaagtttcagtctctgctaagaatgttt
ttaagtttttgcgtcttacatggttctcatggtggggggttggcatctgtacgaatggaa
ctgatattgcttctacaagaatcccagcaggatactgccatcctttccagttcacaggcg
gaacagacatcaatccctcttctgtttgcctgcacagctagtgccaaaactgttgtggca
aaccctttgctgcatctctgcaatttaacccatgatatcctgcatgccataatcaatctt
gattcccctccacatccagatgtacataatcacaagatctacgtaatgcatactctggct
gcatcactttctgcgtgtatctatcagtgtctttgtggagggcaagccaacagctcctca
gtgcaaacaaatccgtttacaggaatggcgtatcagagtgtgttacttattcataggcaa
cctttgagaacaacaagcttagatgaagcagtgattccaaatacatccccaacccagtgg
ccagggataagtgccttgctacgcctgctaaattctgcaggggaagaggcccagccaggg
cttactattttgttgtgtgaaattctcacagcagtttatttaagcctgtttattcatgga
ctagctacacattctagccatgagttattttgcattgtggcccatcctttgatcaacaaa
atgtggtctgcagtcttcggaggaggagcccggatcccaagcagggggcaattgccagtt
aaaccagttatagtatcttctccaatggatgaaggtgacaaacaatcaaagcgttttcga
atttctaccaaaattcagccaaaggagaactcatctcattttgaatcgcctgtagttgat
caagggtcttccatatttcgggaaaaatatatccctcctgagcttagtatctgggattat
tttatagcaaagccctttccccctctgtcacaaaatagacttgaatatgattccgatgag
agccaaggaagtgacgaagaagaagaggatgatgatgatgatgtatcgttatcagatgtc
cagctccaggagcattccaatgcaaattcatatagctgggctttaatgcgactagcaatg
gtacagtttgtactccagaacttaaagaatttttaccccttggctggtcatgaactttca
gaccttcctgtaaattctcccctttgccatgctgttgtgaagactttacagagatgggag
caagtattgttgagacgacttgaaatgtatgatggccctccaccagattacattaacata
cctgccttggaggaggctgtgtcagctggccctgctatattacgccacaaggcactgctg
gagccaactaatacacctttcaaatcaaagcattcaagtgcattgcctgtaaagagactc
tggcaatacctggtaaaacaagagggcatccaagaaacatttataagaaacatatttgcg
aaaaaaagatcaccgactgagactgaaacagacactggctatacagggagcagagcaaga
ataattcataaagagtctgacattatcacagcctttgcagttaataaggctaacagaaac
tgcattgcaatagcttcaagccatgacatacaggaactggatgtttctgcaatcttggcc
acccagatttattcctggattgatgatgagtttgaaactgaaaataaaggggctgatgat
tttctggttgtacacacccgtgatgatttatcagcagtgcagggtacgacaccgtacacc
cacagcaatcctggcactcccatcaatatgccctggcttgggggcgttcagactggaagg
ggagcatctgtgatgataaagaagcctatcaataatgtccgaaggatggcatctcaccca
accctaccctactatctaactggtgctcaagatggcagtgtgagaatgtttgaatggggc
cattctcagcagataacatgcttccgatctggtggaaattctagagtgactcggatacga
ttcaaccaccaggggaataagttcggaattcttgatgctgatgggcatatcagtctgtat
cagacaaactggaaatacagtgcagctacaggggccccacccaaaccatacctgacatgg
cagtgccataacaagactgccaacgactttgttttcatcagttcctcatctttaatagcg
acggcaggacagtcaaatgataatagaaacctctccctgtgggatacactggtggcacct
gcaaatagtttaattcatgcgttcatgtgccatgatagcggggctactgtaattgcatat
gccccaaaacagcaactgttaatatctgggggcagaaaaggatttacttgtctgtttgac
ctccggcaacgagtacagaaacatcacttccagagccatgattctgctgttaaagcgatt
gccattgataccacagaagaatacttcattactgggtcagccgagggcaacattaaggtt
tggaatctgacaacattaaatttgatgcacactttcataaatgagcacgctcgccagtct
atcttcaggaacattggaacaggagtcatgcaaatagagactgggccagccaatcacatc
ttctcttgtggagcagatggcacagttaaaatgagaatattgccagatcgttacagtaca
cttaatgacctcctaaaaaacgatgtaaaatttgtgctttaa
DBGET
integrated database retrieval system
