Xenopus tropicalis (tropical clawed frog): 100495489
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Entry
100495489 CDS
T01011
Symbol
itgad
Name
(RefSeq) integrin alpha-M
KO
K06461
integrin alpha M
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04514
Cell adhesion molecules
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100495489 (itgad)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100495489 (itgad)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100495489 (itgad)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100495489 (itgad)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100495489 (itgad)
04515 Cell adhesion molecules [BR:
xtr04515
]
100495489 (itgad)
04090 CD molecules [BR:
xtr04090
]
100495489 (itgad)
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100495489 (itgad)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100495489 (itgad)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100495489 (itgad)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
100495489 (itgad)
CD molecules [BR:
xtr04090
]
Proteins
100495489 (itgad)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
100495489 (itgad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
VWA_2
Integrin_alpha
DUF11
Integrin_A_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
100495489
NCBI-ProteinID:
XP_002940816
Xenbase:
XB-GENE-6469652
UniProt:
A0A6I8Q475
LinkDB
All DBs
Position
9:12244575..12279192
Genome browser
AA seq
1174 aa
AA seq
DB search
MCMCYCIPTAIWVLSGCYLLLTMATLLHWLLLGTVLPSADGFFVDTDRPITFQNPDRSFG
YQVVQLNQRVIVSAPLQQDGVNKTGTLYSCDPSTSRCQRVPINGSPEDINISLGLTMAVQ
KGNPSQLLACGPTLQRTCGESIYVMGRCYQLDSSLRHQQTLPPSLPECPVRSLDIVFLID
GSGSIYPDQFQEMLTFVSKVIEDFKGTDTLFAIMQYSSWFVLHFDFNKFLATKDHNSLVR
NINQLKGATWTATAIQKVLSQLFIPSRGARDGSQKLLIVITDGEKYGDSLDYSIPIAEAE
RKGIVRFAIGVGRAFSEDTAYSELITIASQPSDKYVYRVGDFSALSKFRKDLQDKIFAIE
GVQVQTGSGFQMEMSQEGFSSVLSADHTVLGAVGAYDWSGGASVYAKGQMKGVWINETQD
QKDMKAAYLGYAVHLLSPKLIAIGAPRYQHTGGVLIYEKDLSSSNWNQRAVIRGEKIGSY
FGSVLNGGSVNSGSSQLLLLVGAPTYYTPETQGGRVFLCPINTRASVLQVTCPIALQGDP
TQYFGHFGSAMCLLPDLTGDNLTDLAVGAPYEDQNQGAIYIFPGQKGGFRTAYIQRIASS
QVAKGLMFFGRSMSGNLDMTRDSLPDLSIGGAGKVLILRSRTVVGVSVSITFNPTEIPIS
SYECPDADTMKAATTMKVCVTCTRKSSAGVVSAQMTYTLLLDADRTQKRAVFDGTERSLQ
KKFPIKEGNDCMTFSIRLPECVEDSLSPLRVALNFTLTGQSVLSEDSPTSLSEQVSFQKN
CGSDGRCQDDLRINATFGDLRHLVVGVSLEVNVTLSVQNYGEDSYNSRVIITHPSGLSYR
RVSLSQSNRRLMIIKCSTPEGERYVICGINNPLLRPSATAIFVVSFHVSSLADLGNRLTI
TTNVTSDNGGAPNDLMKSTAQLKVLYGIYVTITSLEESTKYTNYSSSERSPIVRDVKHMY
KVGNQGQRSLPISIIFMVPVKLKETVVWENPNIIVSEEELSNSTTNCTNTGEITNTGEFL
EENEAHSVLNCTVMTCLRFVCSIDSLNIQKSINFTITGKVTKDWATQTAHQKVLLQSSAE
IVYNSERYQHILEQNQPFTRAQAQTVLEVFIEYNYLPVIIGSSVGGLVLLALISAGLYKV
GFFKRQYKELMELPEGETVGGEETAMEAQSEQTQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgtgttactgcatacccacagctatctgggtgctatctgggtgctatctgctg
ctcaccatggctacactgctccattggctgctcctcggcacagttctgccttctgctgat
ggtttcttcgtggacactgatcgaccaattaccttccagaatccagaccgcagctttgga
taccaagttgtgcaattaaatcagagggtgattgtgagtgctccccttcaacaagatggc
gtgaataaaaccggaactttatatagctgtgatccttcaacatcaagatgtcaacgagtt
cctattaatggctcccctgaggatattaacatttcacttggacttactatggcggttcag
aagggcaacccgtcccagttactggcatgtggcccaaccctgcagagaacctgtggggag
agcatctatgtaatgggccggtgttatcagctggacagtagcctgaggcaccagcaaact
ctccccccctccctgccagagtgccctgtgcgcagcctggacattgtgttcctcatagat
ggatcggggagcatttacccagatcagttccaagagatgttaacgtttgtgtcaaaagtt
attgaagactttaaggggactgacacgctgtttgccatcatgcagtattccagctggttt
gtgctacactttgatttcaataagttcttagccaccaaagaccacaatagcctggtacgg
aacatcaatcaactgaaaggtgctacctggactgctactgccattcagaaagttctgagt
caactgtttatccctagtcgtggagctcgtgatggatcccagaagttacttattgtgata
actgatggagaaaaatatggagattcactcgattactccatacccattgctgaggcagaa
cgcaagggaattgtgcgctttgctattggggttggaagggccttctcggaagacacagca
tatagtgagctgattactattgcatctcaaccatctgataaatatgtctacagagtcggt
gacttctctgctcttagcaagttccggaaggatctgcaggacaagatatttgctattgaa
ggtgtgcaggtacagactggaagtggctttcaaatggagatgtctcaggaagggttcagc
tcagttctatcagctgatcatactgtgcttggggcagttggggcctacgactggtcaggg
ggagcttctgtgtacgcaaaagggcagatgaagggcgtctggataaatgaaacacaagat
caaaaagacatgaaggcagcttatttggggtatgcagtgcatctgttgtcaccaaaactg
atcgccattggtgcaccaagataccaacacactggaggtgtcctcatctacgagaaagac
ttgtcctcctccaactggaaccagagggctgtcattaggggagagaagattggttcgtat
ttcggatcagtactgaatggaggctctgtcaactctggttcttctcagttactccttctg
gtgggggctccaacctattatacgcctgagacccaaggaggtcgtgtgtttctttgtccc
attaataccagggcttcagtcctccaagtcacctgtcctatcgctctgcaaggggaccct
actcaatactttggccattttggttctgccatgtgtcttctgccagatttgactggagac
aacctgactgacctggccgtgggtgcaccatatgaagatcaaaaccaaggggcaatatac
atatttccaggacagaaggggggctttagaacagcttacattcagcgcattgcaagcagt
caggttgctaaaggcctcatgttctttggaaggtcaatgagtgggaatctggatatgact
agagattcactgccggatctgtccatagggggtgcagggaaagtcctcatactcaggtct
cggacagttgttggagtctcagtgtccataacttttaaccccactgagataccaatatcc
tcctatgagtgcccagatgctgatacgatgaaggcagcgacaactatgaaagtgtgtgtg
acctgcacaaggaagagttcggccggagttgtctctgcccagatgacatacactctcctg
ttggatgctgatcgtactcagaagcgggctgtttttgacggaacagaacgttcactacag
aagaagttccccataaaagaaggcaatgactgtatgacattctctataagactgcctgag
tgcgttgaggattccctctcccctctacgtgttgctcttaatttcaccttaactggacaa
tctgtgctcagcgaggattcacctaccagcctctcggaacaggtctcatttcagaagaac
tgtgggagtgatgggcggtgccaggatgatctaaggatcaacgccacttttggagatctc
agacatcttgtggtgggggtgtctcttgaggttaatgtcactctctcagtgcaaaattat
ggggaagattcctacaactctcgagttattataactcacccctcaggactgtcctatagg
agggtgtctcttagccagagcaacaggcgcctgatgataattaaatgttctactcctgag
ggtgagagatatgttatctgcggtattaacaaccccctgttgagacccagtgctacggcg
atcttcgtggtcagtttccatgtctcttctttggctgatctgggaaaccgtttgaccatt
acaaccaatgtcaccagtgacaatggaggagcacccaatgacctaatgaaatcaaccgcc
caattaaaagtgttgtatggaatctatgtgactatcaccagccttgaagaatccaccaag
tacacaaactactcttcgtcagaaagaagtcctattgtgcgggatgtgaagcacatgtac
aaagttgggaatcaagggcagaggtcgttaccaatatccattattttcatggttcctgtg
aagctgaaggagactgttgtgtgggaaaatccaaatatcattgtttcagaggaggagcta
agcaacagtacaactaactgtaccaacaccggggaaataaccaatacaggagagttcctg
gaggaaaatgaagctcattcagttctgaattgcaccgtgatgacatgtctcaggtttgtg
tgtagcatcgacagtttgaacattcagaaatcaatcaattttacaatcactgggaaagtg
accaaagactgggccacccagactgcccaccagaaagtgctgctacaaagttctgcagaa
attgtgtataactcggagagatatcagcacatcctagagcagaaccaaccattcaccagg
gctcaggcccagacggtgctggaggtattcattgagtacaactacctgcctgtgattatt
gggagcagtgtggggggcttggtgcttctggctctgatcagcgctgggttgtacaaggtg
gggttcttcaagcgtcagtacaaagagctgatggaattaccagaaggagaaactgtagga
ggtgaagagactgcaatggaggcccaatctgagcaaacgcagtag
DBGET
integrated database retrieval system
