Xenopus tropicalis (tropical clawed frog): 100495600
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Entry
100495600 CDS
T01011
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100495600 (sh3tc2)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100495600 (sh3tc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
TPR_1
TPR_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
100495600
NCBI-ProteinID:
XP_002939154
Xenbase:
XB-GENE-488911
UniProt:
A0A803K4Q9
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Position
3:40731988..40793382
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AA seq
1375 aa
AA seq
DB search
MEGQGSLIRGPRLSRNGNYARSTSSWSAMCHSPLEKIMKRTEEAKSFFRKGLKRHASMLV
SSSGKEERRDSGFLAGWPHWHEYSRNRQERCSSLEAMASDDAEDSELVCVAEESPVGKES
VSLAVGEGFITEILLSFSILQRSTQGPNVHLQEVARKTLWALENDNKDTSMLFKELSARL
VSIQANKDLFLITFKTVEEIWKFTTYLSLGFVACSLEHLLFDESYWLNSALVEDTEIHVS
VNQDQLATLYLGLLLQEGNFYAKSVISSGGGTELDDGNSEFLEVHLNDVVHIKDIGDESA
WEGLSLTSGERGLLPIEAVEPLSHPFYQWFLKTYPVSCNIMEPDCLLGTSQPIGEGVCIA
TEDHVASGWDELSYCTGDTIEVVGFLIPGLKWFVGRCPSNGVMGFVRTKHVDTSCLKALD
KDLLFLSEEERSLLNVFDDDTQKGCMDLLNSLCQTDISSVYRLDGMEPMGIYMKTSSVIN
EDLGEIQITDNWEECEAVSDSSKGSTSEKSSPDSDWKGGVEGFHIQAQEDIDDPKFFVDL
NTGEVDDSEVFEPVLTFLNKEGYQVYFQPLYDLPMSFLSTTFYGFSEEEDLVFYLETSRN
WAKKSQMTWSHIRCCFLLGRICAKRMKLSQARVYFEEALSATKQGFLDLHLLTALYANLS
AIYLKQNMKPKQDLLVEKAASLLVCLPHHNFSSEIEFEVLKYILRKSIVVNNVSFEARTC
FLIFRLLQQLGRYDEALPFVERLQFLLIAPCPQTVNPTLGVMPILSYFYDKKYLPHVALA
SSKLCKTVGMKIMPSPMWRAGIVIQNISKITEGSLNKNYIPAQAAPYLKHALSCSYESGD
VKAQRTLCLILSKLYLQYKLFSGAISYSKRAVELGRWTSDEEAFESSVFLGWMYVLDGHY
EQACKILMLLLDSMQETDSTTQCGVVHNLLANAKKMDNNVIESSRGYTQALKMATETGNR
RNQAIVMANFGRLALSCQAVVMAERYFLQSVHLYMEVQGSDEAEQELVQVLHWLGQLFIQ
QRILENGILCYELALMFALKSNNLKSQLSITEELCNFYSIVCPVTATHIIYCEHWIYLVQ
LLKDKKKEGELLSTLSQLYQTLNTAKSFRKALDYTKQSLRISIDLGQRDQAAESWLQAGR
LYYLLGEQELVEIYLHAAIQASQNAQDITTTQRLYEAAGDVFFHGVQRRERAMYFYKEGA
LPLAKKVQDLEAQLRLYHKLTQLLVSQGYYKKSVEYATLAVRLSASIENPLDELVAFHRL
AGVYYSQRIYEIAEYCYLKALSLCPSPMQHDTETGYYLKIYWRLGNIALLKRKDAGDAAT
YFHLALAAAIGIENEEFQLVLSNKLMDIYGKFLLDEEQADIFRKLIVQLSHISHC
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcagggatccttaatcagagggcccaggttatcgagaaatggcaactatgcc
agaagcacatcatcttggtctgctatgtgccactcaccactggagaaaatcatgaaaagg
acggaagaggcaaaaagcttctttagaaaaggtctcaaaagacatgcctcaatgctggtt
tcatcctcaggtaaagaggaacggagagactcaggattcctggcaggttggccacactgg
cacgaatacagtcgaaacagacaagaaagatgctccagcttagaagcaatggcatcagat
gacgcggaggactcagaacttgtttgtgtggctgaggagagcccagtgggaaaggagtct
gtctcccttgcagtgggagaaggatttatcactgaaatcctcttgtctttctccatcctg
caacgttcgacccagggtccaaatgtccatttgcaggaggtggcaaggaagacactttgg
gccctggaaaatgacaacaaggatacatctatgctatttaaggagctgtctgctcgactg
gtttctatccaagcgaacaaggaccttttccttattactttcaaaaccgtggaagagatc
tggaaatttacaacctatctgtcattagggtttgtggcttgcagcctggaacacctcctt
tttgatgagagttactggctaaactcggctttagtggaagatacagaaatccatgtctct
gtaaatcaggatcaactggcgacactttatctgggcctactcttacaagaaggaaacttc
tatgccaaatcagtaatcagtagtggaggtggtactgagttggatgatggcaattcagaa
tttctagaagtccatctcaatgatgtggttcatataaaggatattggagatgaatcagca
tgggaaggcctgtcattaaccagcggagaaagaggtttgttgcccattgaagccgtggag
ccactgtcacatcccttctaccaatggttcttgaagacgtacccagtatcctgtaacatc
atggagcccgactgcttgcttggaacttctcaaccaattggagaaggcgtttgtattgcc
acagaagaccacgtggcctcaggatgggatgagctcagctactgcactggagacaccatt
gaagttgtaggctttcttataccaggactgaagtggtttgtgggaagatgcccctcaaat
ggagtaatgggatttgtcagaactaaacacgtggacacaagttgtttgaaagccttggat
aaggacttgctctttttaagtgaagaggagagatcacttcttaatgtctttgatgatgac
actcagaaaggctgcatggatctacttaacagcctctgccagacagatatcagctcagta
tacagactagatggtatggaacctatgggcatatatatgaaaacttcctctgttataaat
gaggatttgggtgaaattcagataactgacaactgggaggaatgcgaagctgtaagtgac
tcatccaaaggcagcacatcagagaaatcaagtcccgactctgactggaaaggtggagtg
gagggattccatattcaagcacaggaagacatagatgatccaaagttctttgtggattta
aacactggggaggtggatgattctgaagtctttgaacctgttttaacattcctcaacaaa
gagggttaccaagtctacttccagcccttatatgacttgcctatgtcatttttaagcacc
acattttatggattttctgaggaagaagatttggttttctaccttgaaacatctcgtaac
tgggctaaaaagagtcagatgacttggtctcacatacggtgttgctttcttctgggacgg
atttgtgccaaaagaatgaagctatcccaggccagggtttattttgaagaagcattaagt
gctacaaagcagggatttcttgatttacacctgttgactgctttatatgctaacctctca
gctatttacttgaagcagaatatgaaacctaaacaggacctgttggtagagaaggcagca
agcctcctagtgtgcttgccccatcacaattttagctcagaaatagagtttgaggtgtta
aaatacattttaagaaaatccatagtcgttaataatgtctcatttgaagccaggacttgt
tttctcattttcaggctgctgcagcagctgggaagatatgatgaagcattgccatttgtg
gaacgactgcagtttcttctcattgctccatgtcctcagacagtaaatcccacattaggt
gtgatgccaattttaagttacttctatgacaaaaaatatcttccacatgttgctttggca
tcatccaaactgtgcaagactgtgggcatgaaaataatgccatcaccaatgtggagagct
gggattgttatacaaaatatttctaagatcacagaggggtctttaaacaagaactacatt
cctgcacaagctgctccttacttgaaacatgcactttcatgctcctatgagagtggagat
gtgaaagctcaaagaacattatgccttattttatctaaattatacctccaatataaactc
ttttctggtgctatttcttattccaaaagggctgttgaattaggcagatggaccagtgat
gaggaggcatttgaatcttctgtctttttgggatggatgtatgtactggatggccattat
gaacaagcttgtaagattctgatgttgctgctagactcaatgcaggaaacagacagtacc
acccagtgtggcgttgtccataaccttcttgccaatgccaaaaagatggataataatgta
attgaatcatcaagagggtatacccaagctctaaaaatggccactgaaacagggaacaga
cgaaaccaagcaatcgtcatggctaattttgggagactggctctttcttgtcaagctgtg
gttatggcagagagatactttcttcagtctgtccatttgtatatggaagtacagggcagt
gatgaggctgaacaggaactggtacaggttttgcattggctaggacaattattcattcaa
caaagaatccttgaaaatggcatactatgctatgagctggccttgatgtttgccttgaag
tctaacaaccttaaaagccagctgagtatcactgaggaattgtgcaatttctacagcata
gtgtgccctgtcactgcaacccatatcatatactgtgaacactggatctacctagtgcag
ctactgaaggacaagaaaaaggaaggagaattgctaagcaccctaagccagttataccag
accctgaatactgccaagtcttttcggaaagccctggattacaccaagcaaagtttacgg
atttccattgatctgggtcagcgtgaccaagctgctgagagctggcttcaagcaggaaga
ttgtactatctgttgggagagcaagaactagtggagatttatttgcatgctgctatacag
gcatcccagaatgcacaggacattaccactacacagaggttgtatgaagcagctggagat
gtgttctttcatggagttcagaggagagaaagagcaatgtatttttataaggaaggtgct
ctcccattagcaaagaaagtccaggaccttgaagcacaacttcgtctttatcacaagctc
acacaactacttgtaagccaaggctactacaagaagtcagtggaatatgccactttggca
gtccggctcagtgccagtattgagaatccgctagatgagctggttgctttccatcgcttg
gccggagtatactattcccaaaggatttatgagattgctgagtactgttacctcaaagcc
ctgtcattatgcccttctcctatgcagcatgatacagagactggctattaccttaagatt
tactggcggctgggcaatattgctctgcttaaaagaaaggatgcaggggatgctgctaca
tacttccaccttgccctggcagctgctattggcattgagaatgaagagtttcagctggtg
ctaagtaacaaacttatggacatatatggaaaatttctactggatgaggagcaggctgac
attttcaggaagctcattgttcagcttagtcatattagtcactgttag
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