Xenopus tropicalis (tropical clawed frog): 100495610
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Entry
100495610 CDS
T01011
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
100495610
NCBI-ProteinID:
XP_031761665
Xenbase:
XB-GENE-493502
UniProt:
A0A1B8Y1A9
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Position
7:complement(2612849..2631086)
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AA seq
582 aa
AA seq
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MSSSVGKEKDPKEREPKVTSTAKEREKEAKAAGLVKESKDKDLKTKVKDAKEGKRDPIGA
QAGVAFSVDNTIKRPNPASGMRKKASNAEVIKELSKCREENATRLDLAKKSIHMLPVSIK
DLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNK
LREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGLRYNRLSAVP
RSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagcgtagggaaagagaaggatcccaaggagcgagagcccaaggtgacctcc
acggctaaagagcgagagaaggaggccaaagccgccgggctggtcaaagagagcaaagac
aaggacctaaagaccaaagtgaaagatgccaaagagggtaagcgagacccaattggggcc
caggccggcgtggctttttctgtggacaatacaattaaacggccaaacccggcatctggg
atgcgtaaaaaggccagcaacgccgaggtgatcaaagaactgagtaaatgtcgggaggag
aacgccactcgcttggacttggccaagaagtccatacacatgcttccggtttccatcaaa
gacctgacccaaatcacggaactttatttatacggaaacaagctgcagtccctgccggcc
gaggtgggctgcctcgtgaacttggtcaagctggcccttagtgagaactctctgactagc
ctcccggactccctcgataacttaaagaagctgtgcatgctggacttgcggcataacaag
ctccgagagatcccggccgtggtctacaggctgagttctctcaccaccctgtttttacgg
ttcaaccgcataaccgcggtggagaaggacatcaagacactgtccaagctcaccatgtta
agcatacgggagaacaagatcaaacacctgcctgcagaaattggggagttgtgcaacctg
attacactggatgtggctcacaatcagctggagcaccttcccaaggagatcggcaactgc
acccagatcaccaacctcgacctgcagcacaacgagctcctggacctgcccgacacaata
ggaaacctgtgcagcctgagtcgcctgggcctgcgctataacagactgtcggccgtaccc
cgatccttagccaagtgcagcgagctggacgagctcaacctggaaaataacaacatttcc
actctgccagaggggcttctctccagcctagtgaaagtgaacagcttaaccctggcccgg
aattgtttccagtcctacccagtgggggggccctcccagttctccactatctactccctc
aatatggagcataatcgcattaacaaaatcccattcggaatcttttcaagagcaaaagta
ttgagtaaactcaacatgaaggacaatcagctgacttctctgcccctggattttggaacc
tggacaagtatggtggagttaaacctggcaaccaatcagttaaccaagattcctgaggat
gtatctggccttgtctccatagaggttctgattctgtccaacaacctgctgaagaagctg
ccacatggtattgggaacctgcgcaagctgagagaattggacttggaagagaacaaactg
gagtctctgcccaatgaaattgcttatctgaaggatctgcagaaactggtcctcaccaat
aaccagttaaccacgttacccagagggatcgggcacctcaccaatctcacgcaccttggc
cttggcgaaaacctcctcacccatcttccagaagaaataggtacactggagaatttggag
gagctgtatctgaatgacaaccccaatttacacagtctccccttcgagctcgctctgtgc
agcaaactgtccatcatgagtattgagaactgtccgctcagccacctccccccccagatt
gtagccgggggcccctcgttcatcattcagttcttaaagatgcaaggtccctatcgtgcc
atggtctga
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