Xenopus tropicalis (tropical clawed frog): 100495682
Help
Entry
100495682 CDS
T01011
Symbol
colgalt2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr00514
Other types of O-glycan biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100495682 (colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100495682 (colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100495682 (colgalt2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100495682 (colgalt2)
Glycosyltransferases [BR:
xtr01003
]
O-Glycan biosynthesis
O-linked Gal type
100495682 (colgalt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
100495682
NCBI-ProteinID:
XP_031756933
Xenbase:
XB-GENE-951226
UniProt:
F6ZQT7
LinkDB
All DBs
Position
4:complement(119961065..120001035)
Genome browser
AA seq
616 aa
AA seq
DB search
MAVISAGYIFLLLLPFCLTNLCASAEELNIEEAVLPESSLQKPSVLIAIIARNAAHTLPY
FMDCIDKLDYPKSRIAIWAATDHNIDNTTAILREWLKSVQKLYHYVEWRPMAEPQSYADE
LGPKHWPASRFAHVMKLRQAALRTAKEKWSDYILYIDADNFLTNPQTLNLMMKENKTIVA
PMLESRTLYSNFWCGMTPQGYYKRTPDYVLIREWKRLGCFPVPMVHSTILIDLRKEASKN
LQFYPPQEDYTWAFDDIIVFAFSSRQAGIQMYICNREHYGYLAVPMKPHQSLQDDIDYFV
HVQTEAMIDRPPLEPSRYVQVPPKHPDKMGFNEIFMINLKRRQDRRVRMLRSLYEQEIQV
KIFDAVDGKALNASQLKAMKIEVIPGYHDPYSGRTLTSGEIGCFLSHYYIWKEVVDRGLE
KSLVIEDDVRFEPLFKHKLMKLMNDIEEAEVEWDLIYIGRKRMQVERPEKAVPNVMNLVE
ADYSYWTLGYAISRQGAEKLIAAEPFNKMLPVDEFLPVMFNKHPVKKYLEYYESRNLKAF
SAEPLLVYPTHYTGQPGYFSDTETSTIWDNETLVTDWDRRYSLKSREQGQIHSDAQNKDA
LPPQPTLETTSSRDEL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaatctctgctggatatatttttttgctgctattgcctttctgtctaacaaac
ttatgtgctagtgctgaggagctgaatatagaagaagcagttctccctgaatcttccctg
caaaagcccagtgtcctgattgccatcatcgctaggaatgctgcacacacgctgccttat
tttatggactgcattgataaactggattaccccaagagcagaatcgctatttgggcagca
acagatcacaacattgataacaccacagccatattacgagaatggttaaaaagtgtgcag
aagctatatcattatgttgaatggaggcctatggcagaacctcaatcatacgctgatgaa
cttggaccaaaacactggccagcttccagatttgcccatgtaatgaaactgcgccaagcc
gcattgcgtactgccaaagagaaatggtctgattatatcttgtatatagatgccgacaac
tttttaaccaatccccagactttaaatctgatgatgaaagaaaacaagacaattgttgcc
ccaatgcttgaatctcgaactctctactctaacttttggtgtggaatgacacctcagggc
tactataaaagaactccagactatgttctgataagagagtggaagagattgggttgtttc
cctgttccaatggttcattcgactattctcattgacctcaggaaggaggcatccaaaaac
ctacagttttatcctccacaggaagattacacctgggcatttgatgatattattgtcttt
gcattctctagcagacaagcaggaattcaaatgtatatctgtaacagagagcattatggg
tatcttgctgttccaatgaaacctcatcaaagcctgcaggatgacatagattattttgtg
catgtgcagacagaagcaatgattgaccgcccacctctggaaccatctcggtatgtccag
gtgccacccaaacacccagataaaatgggatttaatgagatttttatgatcaacttgaag
cgacggcaagatcgcagagtacgtatgcttcgaagtctatatgaacaggaaatccaagtg
aaaatttttgatgctgttgatggaaaggcactgaatgcgagccaactgaaggcaatgaaa
atagaagtgatacctggatatcacgatccctactctggtagaacactaacaagcggtgaa
attggctgtttccttagccattactatatatggaaagaggtggttgacaggggccttgaa
aaatcactcgtcattgaggatgatgttcggtttgagcctttatttaaacacaagctaatg
aagttgatgaatgacattgaagaggctgaagtggagtgggatttgatctacattggtaga
aagcgaatgcaagtagagcgcccagaaaaggcagttccaaatgtaatgaatctggttgag
gctgactattcctactggacccttggatatgccatttccaggcaaggagcagagaaacta
atagcagcagaacctttcaataagatgttaccagtggatgagttccttcctgtcatgttt
aacaaacacccagtaaagaaatatttggaatattatgaatctcggaatttgaaggccttc
tctgctgaacctctgcttgtctaccctacacactacacaggccaaccagggtattttagt
gacactgagacatccaccatctgggacaatgaaacactagtaactgattgggatcgaagg
tactctttgaaatctagagagcagggtcagatacacagcgacgctcagaacaaggacgcg
ttaccgcctcagccgacacttgaaacaacatcatcacgggatgaactataa
DBGET
integrated database retrieval system
