Xenopus tropicalis (tropical clawed frog): 100495741
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Entry
100495741 CDS
T01011
Symbol
dsg1
Name
(RefSeq) desmoglein-3
KO
K07599
desmoglein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100495741 (dsg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100495741 (dsg1)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Major cadherins
100495741 (dsg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
100495741
NCBI-ProteinID:
XP_031760298
Xenbase:
XB-GENE-984631
UniProt:
A0A6I8QQX5
LinkDB
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Position
6:111552951..111590762
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AA seq
1179 aa
AA seq
DB search
MDWLLWAKCTVLFIVMLSLQCTCNWELQVNEGKSENGTILWNTVQTRRQKREWLAPVVHL
REEEDNRHRNPIAKVHSDKAIKKQIMYTVSGPGVDMEPYNIFLIDSKTGYLNVTGLKVDR
EVTPVFFLTVRAMSGGADVEKPLSLRIRVIDINDNVPVFSQSVFIGAIAELSSANSLVMQ
IVATDADEVNTLHSKIAYKIISQSPSEPLMFIMNQHTGEVFTVSSNLDREERSSYSLVVS
GADMDGAAGALSGQCGASINILDVNDNFPMLEYESYSVSVEENALQQGLLFIQVFDHDEM
FSDNWLAEFEIVSGNEGGWFVIETDAANNRGILHVVRELNYEALQMMNLGIVVRNRAPFH
PSILSEYQPKVTNIAVQVQNVHEGYAVIPRPLVVSIPAGLTKEQMLNYILVKLQMENVDT
GEIVSNAVYTTDENGSKWLFIDDQGNVRLIGDLPRDTTGTGTGTGTGTGSGNYTAVIFGV
NNDEPTRTVTTTLTVNVTTPTCPVISTQQRTICSNNPQVLLQADDGAGLSTAPFTFSIVS
VSDVSAFTLTNVNGSSAVLATTNTEPRNVTVQVQVANRNGQSCSLPVSILLQICQCMDSG
NTCVQSGTFQKAKSVALGPAAIGLLIMGFLALLLAPLLMLLCSCGPAAKGTFVPVADGYD
GAYRPWGTEGAKPEDVDVTNLLVSSGAPDCYDMSTNNYITGGGLESTTAPTTAEAGGFGT
TRVHSRSFGTGLGTGVVVGSGAGFIGTGLGIHGFSGESNAAGSLTGAMSSQYRDGGTINT
AFVENYFTEKAEAYANEDESRPANDCLLIYDNEGMGSPPGSIGCCSFIDEDLDDSYLDNL
GPKFKTLAEICSGKTPEPMLRVKEPIVVTSIPTVEPNISFSLNDAVSTVRQMPPAPVTSS
TYVSESLVSSSNLQPAKPIPEPGNVLVTETYTTSGPSVFNFDSLVQPNILVTERVVGPTP
GMRGAFPEISDGSNVIVTERVMRPASGVHDMVDFANIQDSSNVVLRERVLAPNTSRLSGS
FNFPELSQGQGQNVVVTERVIHPASNVPANVNIHSDLMDGQNVLVTERLIQPVANVSSSR
SIHPELVGAQNVIVTEKTLRSAPGIQSHMLSPEPLRSVGSTSPSVTRSRVTKYSTVQSGP
AVQSHVLSAEPLLTQAVGSTSPSVTRSRVTKYSTVQYSK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggattggctgctatgggcaaagtgtactgtcttatttattgtaatgctatccttacaa
tgcacctgcaactgggaattacaggttaatgaaggaaaatctgaaaatggaacaatctta
tggaacactgtacaaactagaaggcaaaagagagaatggttggccccagttgtacatttg
agggaagaagaagacaacagacacagaaatcctatagccaaggtccattcagataaagca
ataaagaaacaaataatgtatactgtttctggaccaggtgtggacatggaaccatataat
atattcctcattgacagcaaaactggatatctaaatgtgactgggctaaaagttgatcgc
gaagttacacctgttttctttttaactgtaagggctatgtctggaggagcagatgtggag
aaacctctttccctacgcatcagagttatagacattaatgacaatgtaccagtgttctca
caatctgtttttattggggcgatagctgaattatccagtgcaaacagtctggtgatgcag
atcgttgctactgatgcagatgaagttaatacattacactcaaaaattgcatacaaaata
atttctcagagtccttctgaacccctaatgttcattatgaatcaacacactggagaagtc
ttcacagtgtccagtaacctagatagggaggaaagaagtagctactctttggttgttagt
ggagcagatatggatggagctgccggagctctttctggacaatgtggagcttccataaat
atccttgatgtcaatgataacttccctatgcttgagtatgagtcgtattctgtttcagta
gaggaaaatgcattacaacaaggattgctctttatccaagtatttgatcatgatgaaatg
ttctcagacaactggttggcagaattcgaaattgtgtctggaaatgaaggtggctggttt
gtaattgagacagatgctgcaaataatcgtgggatattacacgttgtcagggaattaaat
tacgaagcattgcaaatgatgaaccttggcatagttgtaagaaacagggcccccttccat
ccttctattctatctgagtaccaaccgaaggtgactaacatagctgttcaagtacaaaat
gtgcacgagggatatgcagttataccacgtccattagtcgtgagcattccagcaggcctg
accaaagaacagatgcttaattatatactggtcaaactgcagatggaaaatgtggacact
ggggaaatcgtatccaatgctgtgtatactacagatgaaaatggtagcaaatggttattt
attgatgaccaggggaatgtcagactcataggtgatctacctcgtgacaccaccggcaca
ggcaccggcacaggcacaggcacaggctcaggcaattacactgcggttatctttggagta
aacaacgatgaaccaactcgaaccgttactaccacacttactgtgaatgttacaactcca
acctgtcctgtgatttctactcagcaaaggacaatatgttcaaacaatccccaggttctt
cttcaggcagatgatggggctggattatccactgctcctttcacatttagtattgtatcg
gtatcagatgtctcagcatttactttgacaaatgtaaatggttcaagtgcagtgttagca
acaacaaatacagaaccccgcaatgttactgttcaagttcaagttgcaaacagaaatggt
cagagttgttccctacctgtgagtatcttattacaaatctgccagtgtatggacagtgga
aacacctgcgtacagtcaggaacattccaaaaggcaaaaagtgttgcgctgggccctgca
gccatcggactgttgatcatgggattcttagcactcttattggctccgctattaatgctg
ctctgctcgtgcggccctgcagcaaagggcacatttgttcctgtagcagatgggtacgat
ggcgcataccggccctggggaactgaaggagcaaaacctgaagatgtggatgtgaccaat
ttgcttgtaagttcgggtgctccggattgttatgacatgagcacaaacaactacataact
ggaggaggactggaatcaacaacagcgccaacaacagctgaagccggtggctttggcact
acaagggttcattctagatcttttggcacaggactgggtacaggagttgtagtgggcagc
ggggcaggattcattgggactggtttgggcatacatggattttctggagagagcaatgcc
gcggggtcattgactggagctatgtcttcacagtacagagatggaggcaccattaacaca
gcttttgtggaaaactactttacagaaaaagctgaagcctacgccaatgaggatgaaagt
cgaccagcaaacgattgccttttgatttatgataatgaaggcatgggaagccctcctggc
tctattggatgctgcagttttattgatgaagacttagatgacagctatttggacaatttg
gggccaaaatttaaaactctggcagaaatatgttctggtaaaacacccgagcctatgctg
cgtgttaaagaaccaatagtagtgactagcattccaacggtagagcccaacattagcttt
tcattaaatgatgctgtttcaactgtccgtcaaatgccacctgcccctgtgactagttct
acctatgtaagtgaaagcttagtttcatcctcaaacctgcaacctgctaaacccattcct
gagcctggtaacgttttagtaacggaaacttacacaacatccggtccttctgtatttaat
tttgattcccttgttcagcctaacatcttggtgacagaaagagtggttgggcctactcca
ggaatgagaggtgcttttcctgaaatatctgatggctccaatgttattgtgacagaaaga
gttatgcgccctgcttctggggtgcatgacatggtagattttgcaaatatacaagacagc
tcaaatgttgtactgcgggagagagtgctagcacctaacacctcaaggctgtctgggtca
ttcaatttcccagaattaagtcagggtcagggtcagaatgtggttgttactgaacgagtg
atacatcccgcctccaatgttccagcaaatgtaaatatacactctgatctgatggatggg
cagaatgttcttgtgacagaaaggctaatacaaccagtagccaatgtttcaagcagtaga
agcatccatcctgagctagtcggtgcacaaaatgtaatagtgacagagaaaacactccga
tctgccccaggtattcaaagccacatgctaagccctgaacccttacgaagtgttggatca
acttcccccagcgtcactcgcagtagggttactaagtacagcactgtgcagtccggcccg
gctgtgcaaagccatgtgctaagtgctgaacccttactaacacaggctgttggatccact
tcccccagcgtcactcgcagtagggtcactaagtacagcaccgtgcagtattctaaataa
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