Xenopus tropicalis (tropical clawed frog): 100495916
Help
Entry
100495916 CDS
T01011
Symbol
mindy4b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100495916 (mindy4b)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100495916 (mindy4b)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
100495916 (mindy4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
NOL11_N
Motif
Other DBs
NCBI-GeneID:
100495916
NCBI-ProteinID:
XP_002937138
Xenbase:
XB-GENE-6037577
UniProt:
A0A8J1JK21
LinkDB
All DBs
Position
5:118260252..118282084
Genome browser
AA seq
466 aa
AA seq
DB search
MDKNQTQGDLACPPRMELEEIASKINDLDKWRSIFSSQGLEVSKAMIQKTQENLKADEES
EDKSETLSIKKHGYFPSNILYSIPKEFIVAADLGGQPISIEMAVELKKILFGNTFYTFNY
EWKKSFFKFCNPFTNMAYSLEAEKTGTRAIQMAVQGHIIKYLLFTKNGDEHSSLQNLQEL
SQKQQEKALAAALADILWTAGERNKATICLITNDPYFTQGPDYKADNFTERLQLFEFVDK
EILEKFLCAHIYCFKNDGCHGVILFLYSLLFSRTLLRLQDDLDITTTHLLQFSLGNFSAR
QALINLMLTGRASPQVFNGDQVSDEGNTEHQARHGVLVRSDVGFLHWSREEMQQDRLPRV
GSMLKTPKFPIWLCNINGTYSVLFGTNMSLLCDWKMEHFFDLYFYNGQLSQSKTVHLTID
THSHHWEEQSKADEGDIEKRFPSVEMTVRTKWDGAAINWHGTVPFY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaccagactcaaggagaccttgcatgcccaccaaggatggaactagaagag
attgcaagcaaaattaatgacctggacaaatggagatcaatattcagctcccaagggttg
gaagtcagcaaagcgatgatacagaagacccaagagaatctgaaagcagatgaagaaagt
gaagacaagtcggagactttgagcatcaagaagcatggatactttccatccaacattttg
tattcaatcccaaaagagtttattgtggcagcagacctcggtggccaacctatctcaata
gaaatggcagtggagttaaaaaagattctttttggaaacacattttatacgttcaactat
gaatggaaaaagtcgttctttaaattctgcaatccatttacaaatatggcttattcactg
gaagcagaaaaaactgggacaagagcaatacagatggctgtgcagggccatatcattaag
taccttctgtttacaaagaatggagatgaacacagctctcttcaaaacttacaggaactt
agccaaaaacagcaagagaaggctctggcggcagctttagcagatatactttggacagca
ggcgagaggaataaagcaacaatctgcctcatcacaaatgatccctatttcacacagggt
cctgactacaaagcagataattttactgaaaggctccagctttttgaatttgtggacaaa
gaaattcttgagaagtttctctgtgcccacatatactgcttcaaaaatgatgggtgccat
ggagtgatactgtttctgtacagtttgttattctctaggacacttctaaggcttcaggat
gacctggatatcactacaacacatttgttgcaattcagtcttggaaacttctcagccaga
caggctttaattaacttgatgctgacaggaagagcaagccctcaggtgttcaatggagat
caggtatcggatgaagggaacacagaacatcaggcacggcacggagtccttgtgcgcagt
gatgtgggtttcttgcactggagcagagaggaaatgcaacaggacagactcccacgggtt
ggaagtatgctgaaaacacccaaatttcccatttggctatgtaacattaatggaacatac
agtgttctttttggcacaaacatgtctctcttatgtgactggaaaatggaacatttcttc
gatctctatttctacaatgggcagctttctcagagcaaaacagtgcatctgactattgat
actcactcgcatcattgggaggagcagtccaaagcagatgaaggggatatagaaaagaga
ttcccttctgtggagatgacagtcaggactaaatgggatggagcagcaattaactggcat
gggacagttccattctattga
DBGET
integrated database retrieval system
