KEGG   Xenopus tropicalis (tropical clawed frog): 100495938
Entry
100495938         CDS       T01011                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20 isoform X1
  KO
K24052  RNA-binding protein 20
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100495938 (rbm20)
Spliceosome [BR:xtr03041]
 Complex A
  Other components
   Complex A specific factors
    100495938 (rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met zf-U1
Other DBs
NCBI-GeneID: 100495938
NCBI-ProteinID: XP_002942947
Xenbase: XB-GENE-6465465
UniProt: A0A803KHB6 A0A8J0QYF5
LinkDB
Position
7:complement(2676682..2807766)
AA seq 1064 aa
MCENDPRVLPALSLTSEAMVSRVHPEPASYSCAPFVDNNALSISAPLRGGTPNPLLPSPA
SLQLAQLQAQLTLQRLKLAQTAVTSNTAAAATVLNQVLSKVAMSQPLFNPLRNAAMMGAH
SHAGMNPLGPALSNARLAPSGLPFSAHNSPLAPSHAHNANSMQPFAKGIGGTKAVGFFPG
SQGFASDTDSSGYHGLVVGSSVAGAASDGHYGPKHDHLPGFKKDFYDSHGQFRPQKGPNN
QWESSRSWQSPSPHYEGRNELYNPEEPTPDTKFSPSSSPTFARHNNGKIPSSALKSLQPQ
ELNDFHGIAPQHLPHICTMCDKKVFNLKDWELHIKGRMHIQNVMSFSETVGLHPVSAEGP
GSGEFDPVSNEAVPYLQPGLAFSASALGAKRKPAIGRVVHICNIPEGSCNENDVVNLGLP
FGKVTNYILMKSTNQAFLEMAYTEAAEAMVQFYQEKPAMINDEKLLIRMSKRYKELQLKK
PGKNVDAVIYNIHSQRERDMFRDTDRYRNERARSRSPVSRSLSPRSHTPSFTSCSSTHSP
LSASRTEWGNGREAWDQPAYSRREEEREQGPWRDNGEDKRDRTDHWVHDRKHYSWQLDKQ
EMDDRMDGPRGHRERYGNHSSSRYKSRDGEYYRKEAKAKTEGKLPDTQEKSKRKEESKSR
EVKVSSEDTSKKEVRETSPSGEADGSKEKDAAKNQTDVPNKQQEEDKAKESAANEQAEHK
DETMDHNSVSPKQADASEEPQAAVKQKEDEWESGSELEGEPWYPTNMEELVTVDEVGEED
LIIEPDITELEEIVPVLPKDTASCIQMCSHGICAIDLECRCSQLTNSACSSPHEASIALS
CTSVRESASPESSCYGPDVPDVSLNSEQKSEEMEEHGAARSPHEKESLAESSSSLNKSTN
LQSSIYKEDLDNCMALCDRTDSRAAAIDTARDSHNQEESCDKRERVSGLSVSSEVKSAKM
QESESKERQSSPSWEQEDVFSELSIPLGVEFVVPRTGFFCKLCGIFYTSEETAKTSHCRS
RVHYRNLQSYLSRLAEGCSGKNEMENMVYHEDVGIVPQFEKNRP
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgtgtgagaatgatccccgggttctacctgcgctcagtctgaccagcgaggctatggtg
tcacgggtgcaccccgaacctgcttcctacagttgtgccccgtttgtggataacaatgcc
ctgtctatcagcgccccattaagaggtggaacccccaaccccctgctgccctcccctgcc
agtctccagctcgcccagctccaggctcagctcaccctgcagagactaaagttggcacag
acggcggtgacgagtaacacggctgccgctgccacggtgctcaaccaggtcctctctaaa
gtggccatgtcccagcctctgtttaaccctttgaggaatgcagccatgatgggggctcac
agtcacgcagggatgaaccctcttggccctgccttgtctaatgccaggcttgcccccagt
ggattaccattttctgcccacaattcccctctggccccaagccatgctcacaatgccaac
tccatgcagcctttcgctaagggcattggtggaaccaaagccgtgggctttttcccaggg
tcacagggctttgcctcagacacagactcttctggttaccatggcttagtggtgggaagc
tcagtggccggagcggcctctgatggtcactatggccccaagcatgatcatctacccggg
tttaaaaaggacttttatgattcccacggtcagtttcgcccccagaaaggcccaaacaac
caatgggaatcgtcccgctcgtggcagtctcccagcccccattacgagggcagaaatgag
ctgtacaacccggaggaaccgactcctgacaccaaattcagcccttccagttctcccacg
tttgccagacacaataatgggaagatcccaagctccgctctgaaaagccttcagcctcag
gaactcaatgactttcatggcattgccccccagcacctcccgcatatctgcactatgtgt
gataagaaggtcttcaatctgaaggactgggagttacacattaagggccggatgcacatt
cagaatgtaatgagcttctcagaaacagtggggctgcaccctgtgtcagctgaggggccg
gggagcggtgagtttgaccctgttagtaatgaagctgttccctatcttcagcccggactt
gctttctctgcatctgccctgggggcaaagaggaagcctgctattgggcgagttgtgcat
atatgtaacatccctgaaggaagctgcaatgagaacgatgtcgtcaacctgggactgccc
tttggcaaagtcaccaactacattcttatgaagtcaaccaatcaggcctttctggaaatg
gcctacacggaggcagcggaagccatggtacagttctaccaggagaaacctgcaatgata
aatgatgagaagcttcttatccgcatgtcgaagcgttacaaggagctgcagctcaagaaa
ccagggaaaaatgttgatgctgtcatctacaacatccattcacagagggaaagagacatg
ttccgagacacggacaggtatcgaaatgaaagggcaagatctcgaagcccagtgagtcgc
tctttgtccccgaggtcccacaccccaagcttcacttcttgcagttccacccacagtcca
ttaagtgcatcaagaacagaatggggcaacggaagggaggcttgggaccaaccagcttat
agtaggcgagaagaagagcgagagcagggtccatggagagacaacggggaggataaaaga
gacaggacggatcactgggtgcatgaccgcaaacattactcctggcagctggacaagcaa
gagatggacgatcgtatggatgggcctagaggccacagggagagatatggaaaccactct
tcatccagatataaaagcagagatggggaatattacagaaaggaggcaaaggcaaagaca
gagggaaagctcccagatactcaagaaaaatccaagagaaaggaagagtctaaaagtcga
gaggtcaaggtgagcagtgaggacacgagcaagaaagaggtgcgtgagacatccccaagt
ggagaggctgatggcagcaaagagaaggacgcagctaagaaccaaacagatgttcccaac
aagcaacaggaggaggacaaagccaaagagagtgcagccaatgaacaggctgaacataag
gatgaaacaatggaccataattctgtatcccccaaacaggcagatgcatcggaggaacct
caagctgctgttaaacaaaaggaggatgagtgggagagcggaagtgagctggaaggagaa
ccttggtacccaacgaacatggaggagcttgtgaccgtagatgaagtaggagaagaagat
ttaatcatagagccggatataacagaactggaagaaattgttcctgtgctccctaaggac
actgccagctgcattcagatgtgctcccatggcatctgcgctattgatttggaatgcaga
tgtagccaattaactaacagtgcttgttcgtctcctcatgaagcctctatagctttgagt
tgtacctcagtaagagaaagtgccagtcctgaaagtagctgctatgggccagatgtgccc
gatgtaagccttaattctgagcagaagtcggaggaaatggaggaacatggagcagcgaga
agccctcatgagaaggaaagcctagcagagagctctagtagtctaaacaagtcaaccaac
cttcaaagttccatctataaagaagatctggataactgcatggccttgtgtgataggaca
gactctcgagcggctgccattgatacagcgagggattctcacaatcaagaagaaagctgt
gacaagagagagagagtttctggcctttctgtatcatctgaagtaaaatctgccaaaatg
caagaaagtgaatccaaagagagacagtcatcgccctcgtgggaacaagaagatgtgttc
agtgagctcagtattcctctaggggtggaatttgtggtgccgagaaccggcttcttctgc
aaactgtgtggcatcttctacaccagcgaggaaacggcaaagacgtcacattgccgcagt
cgtgtacattacagaaacctacagagttacttgtccaggctggccgaggggtgctcagga
aagaatgagatggagaatatggtttatcacgaggatgttggaatcgtcccgcagtttgag
aagaacagaccttaa

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