| Entry |
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| Symbol |
smarcd3
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| Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
xtr Xenopus tropicalis (tropical clawed frog)
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| Pathway |
| xtr03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:xtr00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100495941 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:xtr03021]
100495941 (smarcd3)
03036 Chromosome and associated proteins [BR:xtr03036]
100495941 (smarcd3)
Transcription machinery [BR:xtr03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100495941 (smarcd3)
Chromosome and associated proteins [BR:xtr03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100495941 (smarcd3)
PBAF complex
100495941 (smarcd3)
GBAF(ncBAF) complex
100495941 (smarcd3)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
6:387728..464510
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| AA seq |
341 aa
MHPDRTEPSEPAPRDRHGEKGRHLVPECSEGGHMAADDSAGGARRATKSKLFEFLVHGVR
PGMPSGARMPHQGAPMGPPGPPFGGSPSVRPGIPPAVLEPTRKRSAPPQVQQQATPTQGR
SRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRIDIQEALKRPMKQK
RKLRLYISNTFNPAKADADDSDGSIASWELRVEGKLLDDPSKMKRKFSSFFKSLVIELDK
DLYGPDNHLVEWHRTPSTQETDGFQVKRPGDVSVRCTLLLMLDYQVRTAVLPLCTPIYPY
GLKPNMLNCAMTYIRERTTDISLLRHDLYKRTYYGHLSPAP |
|---|
| NT seq |
1026 nt +upstreamnt +downstreamnt
atgcatccagatcgaacagaaccatcagaaccagcaccaagagacagacatggagagaaa
gggcggcacctagtacctgagtgctcagaggggggacacatggcagctgatgactcggca
ggaggagctcgcagggcaactaagagcaaattgtttgagttcctggtacatggagtgcgt
cctgggatgccatctggggcacgcatgcctcatcagggagcccctatgggccccccaggg
cccccgtttggtgggagtccctcagtgcggcctggaatacccccagcagtgctggagcca
acaaggaagcgttcagctccacctcaagtccagcaacaagccactcccacacaggggcgg
agtcgcagcgccaagagaaggaagatggcggataagatccttccccagaggatacgggaa
cttgtccccgagtcccaggcctacatggaccttctcgcctttgagagaaaactggaccaa
accatcatgagaaagcgcattgacatccaggaggcactaaagcgaccaatgaagcaaaag
cggaagctgcgtctttatatctccaatacgttcaatcctgcaaaagcagatgctgatgac
tctgatgggagcattgcatcctgggaactgcgtgtggaaggaaaactactggatgatccc
agtaagatgaagagaaaattctcctccttcttcaagagtttggtcattgagttggataaa
gacttgtatgggccggacaatcacttggtggagtggcaccggaccccaagtacccaggag
accgatgggtttcaggtgaaaagaccaggggatgtgagtgtgcgatgcaccctcctatta
atgctggactaccaggtacgtactgcagtattacccctatgtacccctatatacccctat
gggctcaaacctaacatgttgaactgcgccatgacttatataagagaacgtactacggac
atctctctcctgcgccatgacttatataagagaacgtactacggacatctctctcctgcg
ccatga |
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