KEGG   Xenopus tropicalis (tropical clawed frog): 100495941
Entry
100495941         CDS       T01011                                 
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
  KO
K11650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100495941 (smarcd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100495941 (smarcd3)
   03036 Chromosome and associated proteins [BR:xtr03036]
    100495941 (smarcd3)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100495941 (smarcd3)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    100495941 (smarcd3)
   PBAF complex
    100495941 (smarcd3)
   GBAF(ncBAF) complex
    100495941 (smarcd3)
SSDB
Other DBs
NCBI-GeneID: 100495941
NCBI-ProteinID: XP_031759797
Xenbase: XB-GENE-494884
UniProt: A0A8J1JPJ2
LinkDB
Position
6:387728..464510
AA seq 341 aa
MHPDRTEPSEPAPRDRHGEKGRHLVPECSEGGHMAADDSAGGARRATKSKLFEFLVHGVR
PGMPSGARMPHQGAPMGPPGPPFGGSPSVRPGIPPAVLEPTRKRSAPPQVQQQATPTQGR
SRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRIDIQEALKRPMKQK
RKLRLYISNTFNPAKADADDSDGSIASWELRVEGKLLDDPSKMKRKFSSFFKSLVIELDK
DLYGPDNHLVEWHRTPSTQETDGFQVKRPGDVSVRCTLLLMLDYQVRTAVLPLCTPIYPY
GLKPNMLNCAMTYIRERTTDISLLRHDLYKRTYYGHLSPAP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgcatccagatcgaacagaaccatcagaaccagcaccaagagacagacatggagagaaa
gggcggcacctagtacctgagtgctcagaggggggacacatggcagctgatgactcggca
ggaggagctcgcagggcaactaagagcaaattgtttgagttcctggtacatggagtgcgt
cctgggatgccatctggggcacgcatgcctcatcagggagcccctatgggccccccaggg
cccccgtttggtgggagtccctcagtgcggcctggaatacccccagcagtgctggagcca
acaaggaagcgttcagctccacctcaagtccagcaacaagccactcccacacaggggcgg
agtcgcagcgccaagagaaggaagatggcggataagatccttccccagaggatacgggaa
cttgtccccgagtcccaggcctacatggaccttctcgcctttgagagaaaactggaccaa
accatcatgagaaagcgcattgacatccaggaggcactaaagcgaccaatgaagcaaaag
cggaagctgcgtctttatatctccaatacgttcaatcctgcaaaagcagatgctgatgac
tctgatgggagcattgcatcctgggaactgcgtgtggaaggaaaactactggatgatccc
agtaagatgaagagaaaattctcctccttcttcaagagtttggtcattgagttggataaa
gacttgtatgggccggacaatcacttggtggagtggcaccggaccccaagtacccaggag
accgatgggtttcaggtgaaaagaccaggggatgtgagtgtgcgatgcaccctcctatta
atgctggactaccaggtacgtactgcagtattacccctatgtacccctatatacccctat
gggctcaaacctaacatgttgaactgcgccatgacttatataagagaacgtactacggac
atctctctcctgcgccatgacttatataagagaacgtactacggacatctctctcctgcg
ccatga

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