Xenopus tropicalis (tropical clawed frog): 100496014
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Entry
100496014 CDS
T01011
Symbol
pmfbp1
Name
(RefSeq) polyamine-modulated factor 1-binding protein 1 isoform X1
KO
K23223
polyamine-modulated factor 1-binding protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100496014 (pmfbp1)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Sperm associated proteins
100496014 (pmfbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMFBP1_C
PMFBP1_N
CCDC39
Rod_CreS
CEP135_TSGA10_CC
Fez1
PII1_coiled_coil
CCDC171
ATG16
Leu_zip
CEP135_N
CLIP1
UPF0242
CLE
LIC4_C
Motif
Other DBs
NCBI-GeneID:
100496014
NCBI-ProteinID:
XP_002937625
Xenbase:
XB-GENE-1005436
UniProt:
A0A6I8SJS7
LinkDB
All DBs
Position
4:complement(60116179..60198283)
Genome browser
AA seq
1838 aa
AA seq
DB search
MEDTGWSKDDVSNFHSRKGKGVYDDFHMQEQFRRDETIDIVREDHLKESVSRATECEPVM
SSLLNTRRLQAGISRQLLALHPVPKDLPGSNTASTMGIVQELEELRELVLNKEQLVQHLH
SQLRDAIHNQELSRMEVLEKDTKLQELQETITELHQEISLKDSKAVIHLQEKHYLENQVK
ALSQAVAKPSADPPLLDSSSSLSKTNMFLKTELHHREAELKIAQNELHTLQNTRDVLSSE
LDAQEQQMYRLQRELRERQEELEQRHSRIQLLHMDLQSAGSQRDEAHRQLSECNLRLSYL
EGENFALKVHQREQEVELEKLKTDSVLVQRAEKPQSTWDLEHRRDLELRLSKAEDRVLQN
QAVIHQLQAELQDSSFTVGGLQKQLQEAKAEAVSLRGKYSNSQKGVLELQEQVMDQEQII
NDLQRENSSALESLQKAREQVLNLEQSLQENQEERSRLQEHCQHLEQETGTLHAELETQG
LTLTEQSSQLNQKDQQAERQNREVQALRKQIQFAEDEALQHKAAICSLREDLTLCRTEKL
SLSETIVRLERELSNSKAQRDDLEQEIHFQTRTVEQLQAKVSVSQSAEQSTYEKSLKLQE
EIDMLQSKLHDLQKEVFLAEQRINAALSEKESLQLDVSRKDTELQALKQQLQTSQDALYK
ATQEMDEYKQETDRQVEEKENTIKSLQQELSELQEEFGSCKGQLFQCQAEVEQQRQELAA
AADGKNESAKQLSQLSSKNENLELDLTLLSEKHKAAQKEVSTRDQSILNLRADLMARNEE
LQQVKNELMETSDELSSVRIKLKNLQSDVRSLQEICTDRENAVSEKEKCIIELQREREET
NAQVQRHQKEIISLRQAHQLEAECLRKDTLRLQDKLESVTRRKEDQEVELQRLRTNRERL
SQDLELAQHMQLQLEEKLSQRDADLRVQGEEVQQLQTRLWEAEERALNAENQSGSSLSSM
ELYRSKYQACVGRAGELESNVRQMEDEVQELKLEVAERDARLSALRGELLVMQQELESKC
SELESCEEAIDQLTQELQATQADLSTSRKQARENEEMLQSVKERAAGLHGQVVELEEDLV
KLQTDFASYKATHRYSDNSYGELERLVMQLNQELNHVEAEVQRQKQETAHSHSLLHELKL
DLSKEREQRNSTLKDVERLEQEVCSLRRDAASQIQEHKLLVSEQQQQIQKLQEELRESAK
RLAQREQAIQKRDTVLRQSEADLLRARSSQKSQQQEIERHLESARAMEKRLQNSQKECEQ
RERENCSLRTEMQDLKSELKETYALHQQAVQELAGQEEKTLLLESTLQSTQEQLSERVAE
VVRQEQHLRRLESEMRTLRERTSSSEEELEQCRSIMERLKWELNEVKKKHQTSSQEALSL
QHSVSKLQLEQANEQEQCKAMQQQLQEQNAIQKSLRAELAQQQDRHDELQRQQQQSKDRE
SMLQREVEELSLKIEHSNRLLAERDRALQSLQKSYSQLERRFQNAHEGAREGAAELELTK
NALLQTQRKIQVQTQELNRLEESLSCLRSEGEAAQKIARGQSQELSTAQESVTELRGQMT
AAHAKQREAMEQLSERTRELAALRNELQRSQQRKAELKRELAAQEERVQRLTAEVHSLRE
LQRQKDQEVEVSEGRRRELNNQLQHCQRLYQDSSREQRQREEEMKQLQGQLDALIEKTKQ
EGIEKEALQTSFNHLKQKYSAATSELETLRNSLEAARSDCRRLHHESELVVSNVNDWVSE
QKQASKTLGEKIREQSKQIGQLATEKDHLQEVIEQLHRENRQLRQQLDEWRIENERYKLT
LHKSDLDSRSPSDLLTEDVGTLRSARRVFTSLGNLRTK
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacaggttggagcaaagatgatgttagcaactttcactccaggaagggtaaa
ggggtctatgatgattttcatatgcaagagcaatttcgaagagatgaaactattgatatt
gtaagagaagaccatctgaaggagtcagtttccagggcaacggagtgtgagcctgtgatg
agctccctgctgaacaccaggcgtctgcaggcaggaatatcccgccagctcctggcccta
cacccagtgcccaaagacctaccaggatccaacacagcatcaaccatggggattgtgcag
gagctggaggagttgcgtgaactggtgctgaataaagaacagcttgtgcagcatctacat
agccagctgagagatgccatccacaaccaagaactgagtcggatggaggttcttgaaaag
gataccaaactgcaggagctacaggagaccatcactgaactgcaccaggagatttccctg
aaggactcaaaggcagtaatccatttgcaggaaaagcactatctggagaatcaagtcaag
gccctgagccaagcagtagccaagccttcagcagaccctccactgttggattcaagctca
tcgctgtccaaaacaaacatgtttttaaaaacagagttgcaccatagagaagcagaattg
aaaattgctcagaatgaacttcatacactgcagaacacaagagatgtactttcttctgag
ttggatgctcaggagcagcagatgtacaggttgcagagggagctgagggagaggcaggaa
gagttagagcagcgacacagccgcatacagctgcttcacatggacctgcagtcagctgga
agccagagagatgaggcccatagacagctctccgaatgtaatctgcgcctctcctacctt
gaaggagaaaactttgccttaaaagtccatcagcgtgagcaggaagtggagctggaaaaa
ctgaaaacagattctgtattagtgcagagggcagagaagccacagtcaacatgggatttg
gaacacagaagggacttggagctaagactttctaaagctgaggatcgtgtgctgcagaat
caggcagtaatacaccaactgcaagcagagcttcaggactcttcttttactgtgggtggt
ttgcagaaacagttgcaagaagcaaaagcagaagcagtgtccctcagagggaaatacagt
aactctcagaagggggtgttggaattgcaggagcaggtcatggatcaggagcaaataatc
aacgatttgcaaagagagaacagctctgcattagagagtctgcaaaaagccagagaacag
gtacttaatcttgagcagtctctacaagagaatcaagaggaacgatcaaggcttcaagaa
cattgtcagcacctagagcaagagacaggcactctacatgctgaactggaaacccagggc
ctgacattgactgagcagagcagtcagctgaaccaaaaagatcagcaggcggagcgtcag
aatagagaggttcaagctttgcgaaagcaaatacagtttgctgaggatgaggccttgcag
cataaagcagcaatttgtagccttagagaagatctcacattatgtcgcactgaaaagtta
tctctatcagagaccattgtaaggctggagagagagctgagtaacagcaaggctcaaaga
gacgacttggaacaggagatacatttccaaaccagaactgtagaacagctgcaggctaag
gtatctgtcagccagtctgcagagcagagcacatatgagaagagtttgaagctccaagag
gaaatagatatgttgcagagcaagcttcatgatcttcaaaaggaggtatttctagctgag
cagcgtataaatgcagcactaagtgaaaaagagtctttacaacttgatgtcagtaggaag
gatacagagcttcaagctctgaaacagcaattgcagacttcacaggatgccctatataaa
gctacacaggagatggatgaatataagcaggagacagatagacaggtggaagagaaagag
aacacaattaaatctctgcagcaggaactctctgaactacaggaggaatttggatcttgc
aaaggacagctgtttcagtgccaggcagaggtggaacagcagagacaggagctggcagca
gcagcagatggaaagaatgagagtgcaaagcagctctcacagcttagcagcaaaaatgag
aacctggaactggacctcaccctcctgagtgagaagcacaaggctgcacaaaaagaggta
tccactcgtgatcagtcgatactaaatcttcgtgcagatctcatggctagaaatgaagaa
ctgcagcaagtgaaaaatgagcttatggagactagtgatgagttaagcagtgtccgcatt
aaactcaagaatctccagagtgatgtgcgaagcctccaagaaatttgcacagaccgggaa
aatgcagtcagtgaaaaggaaaaatgcatcattgaactacaaagagaaagagaggagacc
aatgcacaggtacagcggcaccagaaggagattatatccttacggcaggcacaccagcta
gaagcagagtgtttgagaaaggatactctgcgcctgcaagataaattggaatctgtaacc
aggagaaaggaggatcaagaagttgagcttcagcgtttaagaacaaacagagagaggcta
tcacaggatctggagctggcgcaacatatgcaactgcagctggaggagaagttgtcccag
cgagatgcggacttgcgtgtgcaaggggaggaagttcagcaattgcagacccggctgtgg
gaagcagaagagagagcactgaatgctgagaatcagagtggctcttcacttagcagtatg
gaactctaccgcagtaaataccaggcttgtgtgggccgcgctggggagcttgagagcaat
gtcagacagatggaagatgaagtgcaagaattaaaacttgaggtggctgagagagatgca
cgcctttctgccctgcgaggagagctgctggttatgcagcaggagctagaaagcaaatgt
tcagagctggagagttgtgaggaagccattgatcagttaacacaggaacttcaggccaca
caagcagacctaagcacaagccgcaagcaagcacgggagaatgaggaaatgcttcagtca
gttaaagaacgtgcagcagggttacatggacaggtagtagaactggaagaggacctagtg
aaactgcagacagattttgcttcttataaagccactcacagatacagcgacaacagctat
ggagagctggagagactggtcatgcagcttaaccaggagctgaaccacgtagaggcagag
gtgcaaagacagaagcaggagactgctcatagccactcacttttgcatgagctgaaattg
gatctatctaaagaaagagagcaaagaaacagcactttgaaagatgtggagcgcctggag
caagaggtttgcagcctccggagggacgcagcatcacagatccaagaacacaagcttctg
gtttctgagcaacagcagcaaatccagaaactgcaggaggagctcagagaaagtgctaaa
cgtcttgctcagagggaacaggccatccagaagcgcgatactgtgttacgtcagtctgag
gctgacctccttagagctcgcagttcccaaaaatcacagcaacaggagatagagcgccac
cttgagtctgctcgagcgatggagaagagattgcagaattcacagaaagaatgtgagcag
agagaacgagaaaattgttccttaagaacagaaatgcaagatctgaaaagtgagcttaaa
gaaacatatgcacttcatcaacaagcagtgcaggagctggctggtcaagaggaaaagaca
cttttattagagagcacactgcaaagcacccaggagcagttaagtgagcgcgtggctgag
gttgtgagacaggaacagcacctgcgcaggctggaaagtgaaatgcgcacattgagagag
aggacaagtagcagcgaagaggagctggaacagtgcagatcaataatggaacgactaaag
tgggagcttaatgaggtaaagaagaaacatcagacctcctcacaagaagccttgagtttg
cagcactcagttagtaaacttcagcttgagcaggccaatgagcaggagcaatgtaaagct
atgcagcagcagttacaggagcagaatgccatccagaagagtctccgagctgagctggca
cagcaacaggacagacatgatgagctgcagagacaacagcagcagagcaaagatcgagag
agcatgctgcagcgagaagtagaggagctgagcctgaaaatcgagcactctaacaggctg
ttagcagaaagagatcgggcacttcagagcttgcagaaaagctactcacaactagaaagg
agatttcagaatgcacacgagggagccagagagggtgcagcagaactggaattaaccaag
aatgctttgctacagacacagaggaaaatccaagtccagacccaagagctaaatcgcttg
gaagaatctttgtcatgcttgcgttcagagggggaggcagcgcagaagattgcaaggggc
caaagccaggaactgagcacagcacaggagagtgtgacagaactgagaggtcaaatgact
gcagcacatgccaagcagagagaggccatggagcagctatctgagcgcaccagggagttg
gcagctctgcggaatgagttacagcgcagtcaacagagaaaggctgagctaaagagagaa
cttgcagcacaggaggaacgtgttcagagactgaccgcagaggtccattctttgcgtgag
cttcagcgacagaaagatcaagaggtggaggttagtgaggggcgccggagggagctgaac
aaccagctgcagcactgccagaggctctaccaagacagctcccgtgagcagagacagagg
gaagaggagatgaagcagctgcaggggcaacttgatgccttgatagaaaaaacaaaacag
gagggaattgagaaagaggctttgcagacatcattcaaccatctaaaacagaaatacagt
gcggctactagtgagctggaaactctgagaaactctttggaagcagcaagatctgactgc
cgccgcttgcaccatgaaagtgaactggtcgtgagcaatgtaaatgactgggtgagcgag
caaaaacaagccagcaagaccctaggagagaagatccgggagcagagtaaacagatcggg
cagctggcaacagaaaaggaccatttgcaggaggtgatagaacaacttcaccgagagaac
aggcaactcaggcagcagctagacgagtggagaatagaaaatgaacgctataagctgact
ctgcataaatctgacctggacagcaggagtcccagtgaccttctcactgaagatgtgggg
acccttcgctctgcccgccgtgtctttaccagtcttggaaatctacggacaaaatga
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integrated database retrieval system
