Xenopus tropicalis (tropical clawed frog): 100496055
Help
Entry
100496055 CDS
T01011
Name
(RefSeq) pulmonary surfactant-associated protein D
KO
K10068
pulmonary surfactant-associated protein D
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100496055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100496055
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xtr04091
]
100496055
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Opsonins
100496055
Lectins [BR:
xtr04091
]
C-Type lectins
Collectins
100496055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
100496055
NCBI-ProteinID:
XP_017951541
UniProt:
A0A6I8RF44
LinkDB
All DBs
Position
7:50562943..50572448
Genome browser
AA seq
281 aa
AA seq
DB search
MKSEMRYCLQIIAVITALLLALLSRVGSETPAMCSVVQGLPGLNGRDGRDGASGAKGDPG
SQGLPGVPGTPGLRGNTGPPGKVGPKGNQGDKGENGIQGMPGLKGDRGNSGPQGVPGPKG
DKGYSDSVIETLRAKVNNMEAELRHLKLNMAMQKKALVFSKGTSAAEKLYVTNGEEATYE
DAKATCTKAEGQLASPMNDAENKAISILSLQYNKPVVLGIDDKQNEGTFKYLNNEKIVFS
NWKPGEPNNDNGVEDCVELRTNGIWNDMNCNSKRLTVCEFV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagagatgaggtactgcctacagattattgctgtcatcactgccttactcctg
gctctgctctccagggttggctctgaaactccagccatgtgttctgtggtacaagggctt
ccaggtttgaatggaagagacggtagagatggtgccagtggagctaaaggcgatccagga
tcacaaggattaccgggcgttccgggaaccccaggtttacgaggcaacactgggcctcct
ggaaaagtagggcctaaaggaaaccaaggagacaagggagaaaatgggattcaaggaatg
ccagggctaaaaggagacagaggaaattcaggcccacagggagtacctggaccaaaagga
gacaaaggctattcagattctgtcatagaaaccctacgggccaaggtgaataatatggaa
gccgaactcagacatctgaaacttaacatggccatgcagaagaaagccttagtgttttca
aaaggaacaagtgctgctgaaaaactgtatgtcaccaatggtgaagaggcaacatacgag
gatgctaaggcaacatgcaccaaggctgagggacagctggcatctccaatgaatgatgca
gaaaacaaagctatatcaattttatctttgcagtacaataaaccagtggtacttggtatt
gatgataaacaaaatgaaggtacttttaaatacctaaacaatgaaaaaattgtgttctct
aactggaagcctggtgagcccaacaatgacaatggggtggaggactgcgtagaattgcgt
acaaatggaatatggaatgatatgaactgtaattcaaaacgcctaacagtttgtgaattt
gtctag
DBGET
integrated database retrieval system
