Xenopus tropicalis (tropical clawed frog): 100496061
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Entry
100496061 CDS
T01011
Name
(RefSeq) ras-related protein Rab-38
KO
K07923
Ras-related protein Rab-38
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100496061
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xtr04031
]
100496061
Membrane trafficking [BR:
xtr04131
]
Others
Specific organelles associated proteins
Melanosome
100496061
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab29/32/38 [OT]
100496061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
AAA_7
AAA_22
TniB
AAA_16
RMD1-3
MMR_HSR1_Xtn
PduV-EutP
TsaE
Motif
Other DBs
NCBI-GeneID:
100496061
NCBI-ProteinID:
XP_004916872
Xenbase:
XB-GENE-5873315
UniProt:
F6UXP9
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All DBs
Position
8:complement(44246010..44249559)
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AA seq
210 aa
AA seq
DB search
MMGSPQREILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLNTMV
RLQLWDIAGQERFGHMTRLYYREAVGALVVCDLGRVATVESVSRWKEDLDSKVCLQNGNP
IPVILLGNKCDQVPLGTSASNLEQLGEELGFSHSHMTSAKENVNIEMAISSLIKEMIAND
EDYEPRNDPNIIQPSLHPSVNKACSQCSRL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtctccccagagggaaattctatgtaaggtgctggtagtgggtgaccttggt
gtgggaaagacgtcaatcatccagcgttatgtccacaacgttttctctcagtgctacagg
gctaccattggggtggactttgctctaaagattgtaaactgggacctgaacaccatggtc
agactgcaactctgggacattgcaggacaggagagatttggtcacatgacacggctatat
taccgtgaggcagtgggtgccctcgtggtatgtgacctaggtcgggtggccacagtggag
tcggtgtctcgttggaaagaagatctagattcaaaggtgtgcttgcagaatgggaacccc
atcccagtcatacttcttgggaacaagtgtgaccaagttcccttgggtacatccgcttca
aatctggagcagcttggcgaagagctgggatttagtcacagtcacatgacttctgccaag
gagaatgtaaatattgaaatggcaatctcttctctaattaaagaaatgattgccaatgat
gaagactatgagcccagaaatgatcccaatattatccagccatctctgcacccctcagtg
aacaaggcttgttctcagtgttctaggctctga
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