Xenopus tropicalis (tropical clawed frog): 100496135
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Entry
100496135 CDS
T01011
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100496135 (rfx4)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Other basic domains
RF-X
100496135 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
100496135
NCBI-ProteinID:
XP_031754550
Xenbase:
XB-GENE-1018509
UniProt:
A0A6I8QQR1
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Position
3:complement(15872760..15917978)
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AA seq
731 aa
AA seq
DB search
MHCGLLEQPDMDSTESWIERCLSESENKRYSSHTSLGNISNDETDEEKENRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPSSLPEEKISTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSKRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QSLYTIEDSREEHRKLIIQLYLEFDHLLEEQSPIESYIDWLDSMVDRCVVNVASKKQGSL
KKVAQQFLLIWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKGEAHGEIREEIILGDPAISTPSPVPFSPAASSSSVEMPSATSPVSNQSPEVGVVA
ATTGTMQSYTWSLTYTVTTAANGPGENGQQVPCMRSPHMAPSVTHRIPVYPHREDGYTGS
YNYGTYSNQGHHPIASQYTSLPHESGLSGPLHYTAYHRSSSQYPFNSQTRMEPCLMTGAT
RLHPSQVAPRWPDVTSTNTCFTSPTMHSARYANTSDMYTSLAPRRNSDYEHMQHFPGFAY
INGEASAGWAK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtggcttactggaacagcctgacatggattctacagaaagttggattgagcgg
tgcctaagtgaaagcgaaaacaaacggtactccagccacacgtccctcggaaacatttct
aatgatgaaacagatgaagaaaaggaaaaccgagcatcgaagcctcattctactccggca
actttgcaatggcttgaggaaaactatgagattgcagaaggagtctgtattccaagaagc
gccctctatatgcattacctggatttctgcgagaagaatgatacgcagccagtgaacgcc
gccagctttgggaagataattagacagcagttcccacagttaactacaagaagacttggt
acaagaggccaatcaaagtaccattattatgggatagcggtgaaggagagctcacaatat
tacgatgtaatgtattcaaagaaaggagcagcttgggtcaacgaaacagggaaaaaagaa
gtcaccaagcagacagtagcatattcaccccggtccaagctcgggactttactgccagag
tttccaaatgtcaaagatctaaatctgccaagcagccttccagaagaaaagatttctacc
tttattatgatgtatcgaacccattgtcagaggatattggacactgtcatccgagccaac
tttgacgaggttcagagtttcctactgcacttttggcaaggaatgccaccgcacatgctt
cccgtgttgggctcatccactgtggtaaatattgtcggggtgtgtgactcaatcctctac
aaagcaatctcaggagtcttaatgccaactgtgttgcaagctctgcctgacagcttgacc
caagtaataaggaaatttgcaaaacaactggacgaatggctcaaagtcgctcttcatgat
cttccagaaaacttgcggaacatcaaattcgagctatcaaaaaggttttcacaaatactg
agaaggcaaacgtcactgaaccatctctgtcaggcatccagaaccgtaatacacagtgcc
gatattacgtttcagatgctggaggactggagaaacgttgacctaaacagcattaccaag
caaagtctctatacaatagaagactctagagaggaacacagaaaacttatcatccaatta
tatctggagtttgaccacttgctggaagagcaatctccaattgaatcttacattgactgg
ctggattccatggtagaccgctgcgtggtaaacgtagcctcaaaaaaacaagggtctttg
aagaaagtagcccagcaattcctattaatctggtcctgcttcggtacaagagtcattcgg
gatatgacgttgcacagcgctcccagctttggatcattccatttaattcacttaatgttt
gatgactatgtgctttacctgctggaatcattacactgccaggagagagccaatgaactc
atgagggcaatgaagggagaggcacatggggagatcagagaagaaataatattgggtgat
cctgcaatttccacaccttcaccagttcctttctcaccggctgcttcctcttcctcagtt
gaaatgccatctgcaacctcacctgtcagcaaccagtccccagaagttggtgtagtggca
gccacaacaggtaccatgcagtcatacacatggtctctaacttacactgtcactacagct
gctaatggccccggagaaaacggtcagcaagtcccatgtatgaggagtccacacatggcg
ccatcagtcacacacaggatacctgtatatccacatagggaagatgggtacacaggaagc
tataactatgggacgtacagtaaccaaggacaccacccaatagcatctcagtatacgtca
ttaccgcacgagtctgggctctctggacctctacattacactgcctatcacagaagcagc
tctcagtacccatttaacagccaaacgcgaatggagccctgcctcatgactggcgcaaca
agactccatcccagccaggtggcgccccggtggcccgatgtcacctcaaccaacacctgt
ttcacaagccctaccatgcactctgccagatatgcaaacacaagcgacatgtacacctcg
ctggcaccgcggagaaactctgattatgaacacatgcagcattttccaggcttcgcctac
atcaatggagaggccagcgcaggatgggcaaaataa
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