Xenopus tropicalis (tropical clawed frog): 100496268
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Entry
100496268 CDS
T01011
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100496268
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100496268
04147 Exosome [BR:
xtr04147
]
100496268
04090 CD molecules [BR:
xtr04090
]
100496268
Enzymes [BR:
xtr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100496268
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100496268
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100496268
CD molecules [BR:
xtr04090
]
Proteins
100496268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_16
Rad17
AAA_14
AAA_7
APS_kinase
G-alpha
DUF87
AAA_30
AAA_24
DUF815
AAA_15
NTPase_1
Motif
Other DBs
NCBI-GeneID:
100496268
NCBI-ProteinID:
XP_004921510
UniProt:
A0A6I8R053
LinkDB
All DBs
Position
6:29457195..29501010
Genome browser
AA seq
1284 aa
AA seq
DB search
MEQEQKTVVNGSADVTVAISDPNSNSKEKKGFFSRFKKKEKTEKPPTVGVFTMFRYSSTS
DRILMLFGTIASISHGAALPLMMIVFGDMTDSFVNVGQVGSGNFSLEALINASRNLQEQM
TTYAYYYSGLGFGVLLFAYVQISFWTLSAGKQIKRIRSNFFHAVLRQEIGWFDVNDAGEL
NTRLTDDVSKINEGIGDKIAMLLQSLTTFVTGFIIGFVKGWKLTLVILAISPVMGFSAAI
WAKVLSAFTNKELKAYAKAGAVAEEVLSSIRTVFAFGGQDKEIKRYEKNLEEAKRIGIKK
AITANVSIGFAFLMIYAAYALAFWYGTTLIINGGYTIGSVLTVFFAVIIGAFAVGQTSPN
VEAFANARGAAYTIFNIIDNQPKIDSFSKEGLKPDKIKGDIEFKNVKFTYPSRTDIQVLK
GLNLNIPSGKTVALVGSSGCGKSTTVQLIQRFYDPEEGVITLDGQDIRSLNIRYLREIIG
VVSQEPILFDTTIADNIRYGREDVTMEEIERATKEANAYNFIMKLPDKFETLVGERGTQL
SGGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTIVVAHRLST
IRNADVIAGFDNGVIVEQGGHKELMDKGGVYFNLVTLQTVETSKDTEENLELNLSEKIPL
SHTSSNLVRRKSSRHTIKKVTETDNKEEVDEEGKKKEDGPPPVSFLKVMRLNKTEWPYFV
VGIICAMINGATQPAFAIIFSKIIGVFAGPASEMRAKSTMYSLLFLALGGISFITFFLQG
FTFGKAGEILTKRLRLWSFKSMLRQEIGWFDDTKNSTGALTTRLATDASQVQGATGSRLA
LLAQNIANLGTAVIISFIYGWRLTLLILAIVPIIAASALVQLKMFAGHAKKDKKELEKAG
KISTDAVLNIRTVVSLTRERKFEAMYEKNLEGPYRNSIKKAHLHGLTYALSQAIMYFAYA
GCFRFGAYLVAELLMTPDDVFLVFSAIVFGAMALGQTSSFAPDYTKAMISAAHIFSLLER
VPLIDSYSKEGEKPQNCGGNVQFQGVQFNYPTRPDITVLQGLDISVKQGETLALVGSSGC
GKSTTVSLLERFYDPFGGEVLVDGHSVRDLNIQWVRAQMGIVSQEPILFDCSIGENIAYG
DNSREVTQAEIETAAKEANIHSFIDTLTDKYNTRVGDKGTQMSGGQKQRIAIARALVRKP
KILLLDEATSALDTESEKVVQEALDKARTGRTCIVIAHRLSTIQNADKIAVIQNGKVVEQ
GTHQQLLQLKGVYYTLVTIQLGHS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagcagaagactgtggtgaatggttcagccgacgtcactgttgccatatcg
gaccccaattcaaacagtaaagaaaagaaaggatttttctcaagattcaaaaaaaaagaa
aaaactgagaaacccccaacggttggagtgtttactatgtttcgctattctagtacatcg
gatcggattttaatgctgttcggtaccatagcatcgatttcccatggggctgctttgccg
ctaatgatgattgtgttcggggacatgacagacagctttgttaatgtcggacaggttggt
tcagggaacttttcgttggaagctttgataaatgcctcaagaaacctgcaggaacaaatg
accacatatgcctactactattcaggcttgggatttggagtgcttctttttgcctacgtt
cagatttccttctggacactctcagcaggcaaacagattaaaagaattcggagcaacttt
ttccatgccgtgctgcggcaggagattggatggtttgatgtgaacgacgcaggagaactg
aacacgagactcacagatgatgtttccaaaattaacgaagggattggtgataaaattgca
atgctgctgcaatcattaactacatttgtgactggctttattattggctttgttaaagga
tggaagctaactttggttatcttggctattagtccggttatgggattttccgctgctatc
tgggcaaaggtattgtccgcattcaccaacaaagagctgaaagcctatgccaaagctggg
gctgttgcagaagaggttctttcctctataaggactgtgtttgcctttggcggtcaagat
aaagaaataaaaaggtatgaaaaaaatctggaggaagcgaaaagaataggaatcaaaaag
gcaataactgccaatgtgtccattggatttgctttcctaatgatatacgcagcctatgca
ctggccttttggtatggtaccaccctgattataaatggaggttataccattggctctgtc
ctcactgtattctttgccgtcatcattggtgcttttgctgtcggacaaacctcaccaaat
gttgaagcttttgccaatgccaggggggcagcatacacgatattcaacataattgataat
caacccaaaatagacagcttttctaaagaaggcttgaaacccgacaagattaaaggagac
atagaattcaaaaatgttaaattcacatatccatccagaacagatattcaggttctgaag
ggcttgaaccttaacataccaagtggtaaaaccgtggctttagttggaagcagtggctgt
gggaagagtacaacagttcagctcatccagaggttctatgatcctgaggaaggcgttatc
actcttgatggacaagacattcgttctttgaatatcaggtacttaagggagatcatagga
gtggtaagccaggaaccaattttatttgataccacaattgctgataatattcgctatggt
cgggaagatgtcacaatggaggaaattgaaagagcaaccaaagaagcaaatgcatacaac
tttatcatgaaactgcctgataaattcgaaactcttgtgggagagcgaggcacgcagctc
agtgggggacagaagcaaaggatcgctattgccagggcattggtccgcaatcccaaaatt
ctccttctagatgaggcaacatctgctctggatacagaaagtgaatctgtggtccaggct
gctctggataaggcaagagagggccgtaccacaattgtagtggcccatcgtttgtccact
ataagaaatgcagacgtgatcgctggctttgataacggtgtcatcgttgaacaaggaggc
cataaggaacttatggataaaggaggagtgtacttcaatctggtcacactgcagacagta
gaaaccagtaaagacaccgaagagaatttagaactcaacttgtctgagaaaatacccttg
agtcatactagttccaacctggtcaggaggaagtccagccggcacacaataaagaaagtc
acagaaacagacaataaggaagaagtggatgaagagggaaagaaaaaggaggatggcccc
ccacctgtctcatttttgaaagttatgaggctgaacaagacagagtggccctattttgtg
gttggaattatctgtgcaatgataaacggtgccactcagcctgcatttgccatcatcttc
tccaagattatcggggtgtttgcagggccagcatcagaaatgagagctaaaagcaccatg
tactctttgctgtttttggcacttggtgggatatcctttattacatttttcctgcaggga
ttcacctttgggaaagctggagagattcttacaaagaggctgcgactgtggagtttcaaa
tcaatgttaaggcaggaaatcggctggtttgatgacaccaagaacagtacgggagcactg
acaacaaggcttgccactgatgcatcacaagttcaaggggcaacaggatccaggctggct
ttgcttgctcagaatatagctaatctgggcactgccgttatcatatcattcatttatgga
tggcgtttgacccttctcattttggcgattgttccaatcattgctgcttcagccctagtg
caactgaaaatgtttgctggacatgcaaaaaaagacaaaaaggaacttgaaaaagcagga
aagatttcaaccgatgctgttttgaatatcagaacagttgtctccctgacccgagagagg
aaatttgaggcaatgtatgagaaaaatctggaagggccttacaggaattctatcaagaaa
gcccatctccatggattaacctacgctctgtctcaagccatcatgtactttgcatatgcc
gggtgtttccgcttcggggcctatttagtagcagaactcttaatgacgccagacgatgtt
tttctggtcttctcagccattgtgtttggcgccatggccttgggccagaccagctccttt
gcccctgactataccaaagccatgatttcagcggctcatatattcagcttgttggagaga
gtcccactgattgacagctacagcaaggagggagagaaaccacaaaactgtggcgggaac
gtgcagttccaaggggttcaatttaattacccaacccggccagatatcacagtgctgcag
gggctggatatctctgtaaagcaaggggaaacgctggctctggtgggcagcagcggctgt
ggcaagagtacgaccgtgtcactactggaaagattctatgacccgtttggtggagaagtg
cttgtagatggccactctgtgagggacctgaacatccagtgggtgagggcgcagatggga
attgtgtcccaggagcccattttgtttgactgcagcattggggaaaatattgcctacgga
gataacagcagagaagtgacccaagcagagatagagacagcagctaaggaagcaaacatc
cacagcttcatcgacactcttactgataaatacaacacccgtgtgggagataaaggcacc
caaatgtcagggggacagaagcagcgtatcgctatagcaagagctctggttcggaaaccc
aaaatccttctgttggacgaggctacctctgcgctggacacagaaagtgaaaaggttgta
caagaagcactggacaaagccagaacgggccgcacatgtattgtcatcgcccaccgacta
tccaccattcagaatgcagataaaatagcagtcatacaaaatggaaaggttgtagagcaa
gggacacatcagcagctccttcagctcaagggcgtttactacactttagtgactatacag
ctgggccactcgtga
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integrated database retrieval system