Xenopus tropicalis (tropical clawed frog): 100496309
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Entry
100496309 CDS
T01011
Symbol
cldn16
Name
(RefSeq) claudin-16
KO
K06087
claudin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
xtr04382
Cornified envelope formation
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100496309 (cldn16)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100496309 (cldn16)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100496309 (cldn16)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100496309 (cldn16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100496309 (cldn16)
04147 Exosome [BR:
xtr04147
]
100496309 (cldn16)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
100496309 (cldn16)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100496309 (cldn16)
Exosomal proteins of colorectal cancer cells
100496309 (cldn16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
FtsX
DuoxA
Clc-like
Motif
Other DBs
NCBI-GeneID:
100496309
NCBI-ProteinID:
XP_002934087
Xenbase:
XB-GENE-971823
UniProt:
A0A8J0QPA1
LinkDB
All DBs
Position
5:104273973..104290388
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AA seq
234 aa
AA seq
DB search
MRTLLEYTGFFLAFVSAGFLIAATWTDCWMENADDSLEVSTKCRGLWWECVTNVFDGIRT
CDEYDSIYAEHPMKLVATRGLMITADILAGFGFIIFLLGLDCVKFLTDESDVKLKICYVA
GITLLIGGVPGIIGSVWYAIDVYVERSTLVIHNVFLGIQYKFGWSCWLGMIGSLGCFLCG
GILVLCHYLFKENGYGRNHFSSRKTYLRSGGSAAKFDSHPRTETAKMYAVDTIV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccctgctagagtatactggcttttttctagcgtttgtctctgctggctttctt
attgcggcaacttggactgattgttggatggaaaatgcagatgattctctggaggtgagc
acaaaatgccgtggcctgtggtgggagtgtgtcactaatgtgttcgatggcatacggact
tgtgacgaatatgactctatatatgctgagcacccaatgaaattagtggcaacacgtgga
ttgatgataaccgctgatatcttggctgggtttgggttcatcatctttctcttggggctt
gattgtgtcaaattcctgacagatgaatcagatgtcaagttaaagatctgctatgtagct
ggtatcacactgcttattggaggtgtccctgggatcattggctcagtatggtatgctatt
gatgtttacgttgagcgatcaaccttggttattcataatgttttccttggaatccaatat
aagttcggctggtcctgctggcttggaatgattggatcactgggatgttttttatgtggc
ggtatcctcgtattgtgtcattatctttttaaagaaaatggatatggcagaaatcatttt
tcttcaaggaaaacctacttgcgctcgggaggctctgcggcaaaatttgattcccatccc
agaactgaaaccgccaagatgtatgcagtggatacaatagtgtga
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integrated database retrieval system
