Xenopus tropicalis (tropical clawed frog): 100496361
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Entry
100496361 CDS
T01011
Symbol
slc6a4l
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100496361 (slc6a4l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100496361 (slc6a4l)
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100496361 (slc6a4l)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100496361
NCBI-ProteinID:
XP_012825214
Xenbase:
XB-GENE-981144
UniProt:
F7B9G1
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Position
1:complement(147450741..147478530)
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AA seq
590 aa
AA seq
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MSELNCTVPVDKHPKQQASTPNNNAMPLPLITQADSRDKWSKKMDFLLSVIGFAVDLGNV
WRFPYICYQNGGGAFLIPYTIMAIFGGVPLFYMELALGQFHRMGAIPIWKRICPIFKGIG
FAICIIALYVSFYYNTIIAWALFYFYSSFTETLPWTNCDNPWNTPNCTNYFGRSNITWNN
YSKSPAEEFYTRKVLGIHEAEGLDNVGGLRWQLILCLFIIFTIVYFSLWKGVKTSGKVVW
VTATLPYVVLLILLIRGATLPGAWRGILFYLRPKWEKLMDTAVWVDAAAQIFFSLGPGFG
VLLALSSYNPFHNNCYRDALITSTVNCLTSFVSGFVIFTVLGYMAEMRGVEVEDVAKDKG
PSLLFITYPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAIITAVMDEYPHILSKRR
ELFVLGLVIVCFTGSLSTLTYGGAYVVKLLEQFGAGCPIIAVVFLEAIAVSWFYGIQRFS
NDVKSMLGFVPGIFWRICWVAISPAFLAFIIVSSLMDQPPLILFDYQYPKWTVSVGFLIG
ASSFIWIPVYMVYKLVWTPGSLKERLAVCVRPEKTVRDQQLDSMCMASEP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctaaactgcacagttccagtggacaagcacccaaaacagcaggcatctaca
cctaacaataatgccatgccactaccactcataacccaggctgactcccgggataaatgg
agcaagaagatggattttctactttccgtcattggatttgctgtcgacttgggaaatgtg
tggcgctttccttatatctgttatcagaatggtggcggagcattcctgattccatatacc
atcatggcaatttttggaggggtccctctcttctacatggagttagctcttggtcagttt
cacagaatgggtgctatccctatatggaaacgtatctgtccaatctttaaaggtattggt
tttgccatatgcataatcgctttgtatgtgtcattctattacaataccatcatagcttgg
gctttgttctacttctattcctctttcactgagacattgccatggacaaactgtgacaat
ccctggaacactcctaactgcaccaactactttggcaggtctaacattacctggaacaat
tactcaaagtccccagctgaagagttttatacgagaaaggtccttggaattcatgaagca
gaaggcttggacaatgtaggaggcttacgctggcagctgattctctgcctgtttatcata
tttaccattgtatacttcagtttgtggaaaggagtgaaaacctctgggaaggtggtatgg
gtgacagcaaccctcccttatgtggtacttctcattttattgattcgaggagctactctt
ccaggtgcatggagggggattttattttacttaaggcccaagtgggaaaaacttatggat
actgcagtctgggtggatgcagcagcccaaatatttttctctctgggacccggatttgga
gttctcttagcactatcaagctataacccattccacaacaactgttacagagatgcactt
attactagtacagtgaactgtttgaccagcttcgtgtctggttttgtgattttcacagta
ctgggttatatggctgaaatgcggggtgttgaggttgaagatgtggcaaaagacaaaggt
ccaagtcttctttttatcacatatccagaagccattgcaaatatggtgggatctacattt
tttgccataatatttttcctgatgatgataacccttggtctagatagcacgtttggaggc
ttggaagccattataacagctgttatggatgaatacccacatatattgtctaagaggcga
gaactgtttgtcctcggattggtgatagtttgctttactggatcccttagcaccctgacc
tatggaggtgcgtatgttgttaaacttctggaacaatttggtgctggctgtcctattatt
gcagttgtgtttttagaggccattgctgtatcgtggttttatggaatacaaagattctct
aatgatgtaaagtccatgctgggttttgttcctggaatattttggaggatttgttgggta
gcaatcagtcctgcatttttagcatttatcattgtcagctctttaatggatcagccacct
cttatattatttgattatcaatatccaaaatggactgtctctgttggatttcttattgga
gcatcatctttcatatggatacctgtctacatggtgtacaagttggtatggaccccagga
tcccttaaggagcgcctggctgtctgtgtccgaccagagaagacagtgagggatcaacag
ctagattccatgtgcatggcatctgaaccataa
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