Xenopus tropicalis (tropical clawed frog): 100496395
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Entry
100496395 CDS
T01011
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04620
Toll-like receptor signaling pathway
xtr04621
NOD-like receptor signaling pathway
xtr04622
RIG-I-like receptor signaling pathway
xtr04623
Cytosolic DNA-sensing pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100496395 (irf7)
04621 NOD-like receptor signaling pathway
100496395 (irf7)
04622 RIG-I-like receptor signaling pathway
100496395 (irf7)
04623 Cytosolic DNA-sensing pathway
100496395 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100496395 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100496395 (irf7)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100496395 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100496395
NCBI-ProteinID:
XP_012817837
Xenbase:
XB-GENE-5996133
UniProt:
A0A6I8SJ88
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Position
4:complement(34511541..34537972)
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AA seq
603 aa
AA seq
DB search
MQHKELFGPWLLRQINSNIFEGVLWLNLERTLFRIPWKHLNIKTKEEKDYGIFKAWAIES
GKYNKKYENPTSWKTNFRCALKSVTCNDMKMFTEVEDNSSSQEDPHKIYRVNIVPAVLLN
PATSYTASSTPTTNLAEQNILNMPEENDEETLLISPNNTVIEPFDVNGTELDLLEEILRN
TNIYSDTATPFPTVNSQNGFPQENGVLNVDHQLTNGLYMEQSSMWPITNGYEPSVPAQTF
NGAVCSQGVYVTQLNTSGNSYQQEQPVQGLGQQASHYVYKEISTLQPITNSFVPSVHSPA
LVYNHQIYPQASEPDLYDVIQNQPHVNEVYKPATNGIYQDPTERETHARTVEPAPPAVTN
ACVDSLPNPEPPQTTSTEKQCHGSSPLLTSWEVTVFYKGKQVLQKNVSTKFVINTGVMDS
QMGPVDIVCLPSTDDLVDQTQINLTKTILDNVGGGLQLEVSPQDYKLHATRVGKSRVYWS
MSGGLDIMGNPYEGILLKRGIQAEIFDFRKFWEDLGAYKMHQRQSPDYTIYMSFGQSLTN
PIMRRLVLVKLVPHFASYWHEMAKKEGASSINQELISLQISNGSSFSSDLDLCLMDIDFS
CLV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataaagagctctttggcccatggcttctcaggcagattaacagtaacatattt
gaaggcgttttgtggctgaatttggagaggacgttattccgcatcccttggaaacaccta
aacataaagactaaagaagaaaaggattatgggatatttaaggcttgggcaatagagagt
ggaaagtataataaaaagtatgagaatcccacttcttggaaaacgaacttccgctgtgct
ctcaaaagtgttacctgcaatgacatgaaaatgttcaccgaagtagaagataattcaagc
agccaagaagatccccataagatatacagggtaaacattgtgcctgctgtactactcaac
ccggccacttcttataccgcatccagcactcccaccactaacctggcagaacaaaatata
ctgaacatgcctgaagaaaatgacgaggaaacacttcttataagtcccaataacacagtt
attgaaccatttgatgtgaatggaacagaactggatttacttgaggagatattgagaaac
accaacatatattctgatacagcaacaccatttccaacagtaaactcacagaatggattt
cctcaagaaaatggcgtgctgaatgttgaccatcaacttactaatggcttgtacatggaa
caaagcagtatgtggccaattactaatggttatgaaccatctgtaccagcccagacattt
aatggagctgtttgcagccaaggagtatatgtcacacagcttaacacttcaggaaatagc
taccagcaagagcaaccagtgcaaggacttggccagcaagcttctcattatgtctacaag
gaaatcagcacccttcagccaataactaatagctttgtaccatcggtacactccccagcc
cttgtatacaatcatcaaatatatccacaagcatcagaacctgatttgtatgatgtcata
cagaatcaaccacatgtcaacgaagtctacaaacctgccactaacggtatatatcaggat
ccgactgagcgtgaaacacatgcaagaactgtggaaccagcaccccctgctgtcactaat
gcttgtgttgattctctgcccaatccagagccgcctcagactacttctacagaaaagcaa
tgccatgggagcagtcctttactcacttcatgggaggttacagtcttctataaagggaag
caagttctccagaaaaatgtgtccacaaagtttgtcataaatacaggagtcatggacagt
cagatgggacctgtagacattgtttgccttccttcaactgacgacttggtggaccagact
caaatcaaccttaccaagacaatcttggacaatgtaggaggaggcttacagcttgaggtc
agcccacaagactataagctacatgcaacaagagtgggcaaatccagggtctactggtca
atgtctggaggccttgacataatggggaatccgtacgagggaatattgctgaaaagaggc
atccaggctgagatcttcgattttaggaagttctgggaagatttgggggcctacaagatg
catcagcgtcaatccccagattataccatatacatgtccttcggtcagagcctgacaaac
cctataatgaggagactggtgttagtaaagcttgttcctcattttgcctcttactggcac
gagatggcgaagaaagaaggggcctcatcaatcaaccaagaactcatcagtttgcagatt
tccaatgggagttccttcagctcagacttagatctgtgtctaatggacattgacttctcc
tgtttggtgtaa
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