Xenopus tropicalis (tropical clawed frog): 100496465
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Entry
100496465 CDS
T01011
Symbol
grin2d
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100496465 (grin2d)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100496465 (grin2d)
04082 Neuroactive ligand signaling
100496465 (grin2d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100496465 (grin2d)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100496465 (grin2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
100496465
NCBI-ProteinID:
XP_031762459
Xenbase:
XB-GENE-1011863
UniProt:
A0A8J1JX42
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All DBs
Position
7:complement(115378407..115511848)
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AA seq
1345 aa
AA seq
DB search
MCLLLAAHIAFVPAARMLFFMALACASPFLEFREESPRSLNVAIIFSGTSYPPESARFAP
TTFRNFSMEVNPISVILNDTNPRSLILQICDVLSSLRIHGVVFEDDTRTESVAQILDFIS
AQTSMPIIGINGGSAIVLTPKEKGSTFLQLGASTEQQLQVIFEVLEEYDWTSFAVITTLF
PGYEDFVDYIELLTDSSFIGWENRGVLTLNLTDDPSGSKLKRQLREITAQVRLLYCSREE
ADGVFKAAREAGLTGPGYIWFMVGTNLGGTDYMPEHLPVGLFTVLSAGWKDDLHRRVQNG
VAIIAKGAEALYKDFGFIPEFNNDCRAPNLTHMNENLHRYFMNISWGGKDFSFNEDGYLI
NPALVVIALNKERSWEVVGIWEHGDLRMKYPVWSRYGKFLQPVDDDQHLTVATLEERPFV
IVEGVDPATGTCIRDSVPCRKQLNRTDNHLTDPIIFVKQCCKGFCIDILKRLSKTIGFTY
DLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIIDFSVPFVETGISV
MVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYFSPVGYNRSLSTGKRPG
GSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQ
EEYVDTVSGLSDKKFQRPHEQYPPLKFGTVPNGSTEKNIRSNYPDMHAYMIKYNQRHVED
ALQNLKTGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALQKGSKWKRPI
DLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVF
AWEHLIYWKLRHCMRHSGKLDFLLAFSRGMYSCCSAEAALPNSSVPPPPLPSAPLPCSNF
IPRERRVVERWRHARSPNCYKDIYTPTRSVHDPNNKAAPPRLPHKNAFSDGFHRYYGPIE
PEGLSDHLVESGQAFGKDKKMASCQMSPQTQREHFLENPPSYFAIVREKDAPEPPGWQSK
ISRGLYENYQSGKERTPKSTAGARGSRTPETAAKKFDHLGSSYQSKGTCEIEREVYNSGG
PSSSSNRPNKASVDLFDQPHYSGHTRFTYEDERSCGRDCHHRRDDMDLESQPLLHKKSSR
SHMCRSHSHPLVMGASKSKYADLSDSDSDVCERDPPCVKTEMGHNCWYSPNYFCTYPSRE
RQASSAPHKPMRYWSVDKLGKYHQLSKEYLPGTCHGSCYCSSLEMLQPHCHKEPRYFSCS
DEKLERRLDWEHFRSGHCSFLHHHHHSCDLAPIHPTSRSLEDLSRCHLRCHRHIFSPECQ
PRSSHSGTLYKRRGSAHFSSLESEV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgctacttgctgcgcatattgcctttgtgccggccgctaggatgctatttttc
atggccctggcttgtgccagtccgttcctggagtttcgggaggagagcccaagatccctc
aacgtagccatcatttttagcggaacgtcttacccacccgagagtgcccgctttgcacct
acgaccttccggaacttctccatggaagtgaatccaatatcagtgattttaaatgacaca
aaccctcgcagccttatcctgcaaatctgtgatgtcctctccagcctccgcatccacggg
gtcgtctttgaagatgatactcgaactgaatctgttgcccagatacttgatttcatctct
gcacaaacatctatgcccatcattggcataaacgggggatctgcaattgtactaacaccc
aaggaaaaaggttctacctttttgcagttgggtgcgtctactgagcagcaactacaagtc
atctttgaagtcttggaggaatatgactggacatcttttgcagtaatcaccactttgttt
cctggttatgaggactttgtggattacatagagttgctgacggacagcagcttcattggt
tgggaaaaccgaggtgtcttgacccttaatttgactgatgaccccagtggttccaaatta
aaaagacaactaagagagattacagctcaagtgagacttctttattgttctcgggaagaa
gctgatggagtctttaaggctgcgcgtgaggctgggttaactggaccaggctacatatgg
ttcatggtgggaaccaatttaggtggcacagattatatgcccgagcaccttcctgttgga
ctttttacagtgctatctgctggatggaaagatgaccttcaccgcagagtacagaatgga
gtggcaataattgctaaaggtgcagaggctttgtacaaggattttggatttatacctgaa
ttcaacaatgattgcagggccccaaacctcactcacatgaatgagaatctacacaggtat
tttatgaacatctcgtggggtggaaaggacttctcttttaatgaagatggctacctcatt
aatccagctcttgtggtgattgccctcaacaaagagaggagctgggaagtggttggaatc
tgggagcatggagatctacgcatgaaataccccgtgtggtcccgttatgggaagttcctg
caaccagtggacgatgaccagcatctcactgtcgctaccctagaggaacgtccctttgtt
atcgtcgaaggcgtggacccagcaacaggcacctgcatccgggattctgtaccctgtcgc
aaacaacttaacagaactgacaaccacttgacagatcccatcattttcgtcaaacagtgc
tgtaagggtttctgcattgatatactgaaacggctttctaagaccattggatttacttac
gatctctatctagtgaccaatggaaagcatggaaaaaagattgacggtgtgtggaatggc
atgattggggaggtgttttaccagcgggccgacatggccatcggatcactcactataaat
gaggagcgctcggagatcattgacttttcagtccccttcgtggagacggggatcagtgtc
atggtgtccaggagcaacggcacggtatccccatctgcatttttagagccatatagccct
gccgtctgggtcatgatgtttgtcatgtgccttaccgtggttgctgtgactgttttcatc
tttgagtattttagccctgtcggatataaccgaagtctgtccacaggcaaacgtcctgga
ggttccaagtttactatcggcaaatcaatttggcttctttgggcattggtatttaataat
tcagttccggtggaaaatcctaaaggcaccacaagcaaaatcatggttctcatctgggca
ttctttgctgtcatattcttggccagctacactgccaacctggctgcctttatgatccag
gaagaatatgtagataccgtgtctggactcagtgataaaaaattccagagacctcatgaa
cagtacccgcctctgaaatttggcactgttcccaatggcagtactgaaaagaacattcgt
agcaattacccagatatgcatgcctacatgatcaaatacaaccagcggcacgtggaggac
gccttgcaaaatcttaagactgggaaactggacgcgttcatctatgatgcagctgttcta
aactacatggcacgaaaggacgagggttgtaaactggtcaccattggcagcgggaaagtc
tttgccaccacaggatatggaatcgctttacagaaaggttcaaaatggaaacggcccatc
gaccttgcattgcttcagtttctaggtgacgatgagattgaaatgctggagagactgtgg
ttatcaggaatttgccataatgacaaaattgaggtgatgagcagcaaattagacatcgac
aacatggctggtgtattctatatgcttctggttgctatgggattaagccttcttgttttt
gcttgggagcatctcatatactggaagcttcgacactgcatgaggcattctgggaaattg
gatttcctgttggcattcagcaggggcatgtacagttgttgtagtgctgaagcagccctg
cccaactcatctgttccgccaccaccactgccttcagcaccattgccatgttctaacttc
ataccaagagaaagacgtgttgtagagaggtggcgccatgcaagaagtccaaattgttac
aaagatatttacacacctacccgttctgtacatgacccaaacaataaagcggctcctcct
agacttcctcataaaaatgcattctctgatggatttcaccgctattatgggccaatcgaa
cctgaaggactatcagaccatttggtcgagtcagggcaagcatttggcaaagataaaaag
atggcatcatgccaaatgtcaccacaaactcaaagggaacatttcttagaaaacccaccc
tcctattttgcaattgtacgggaaaaagatgccccagagccaccagggtggcagtcaaaa
atttccagaggcctttatgagaactaccagtcaggaaaggagagaacaccaaagtctaca
gctggagcacgaggtagtcgaacaccggaaactgcagcaaagaaattcgatcacttggga
agcagctaccaatcaaagggcacatgtgaaatagaacgagaggtttataatagtggagga
cccagtagcagtagcaatcgccccaacaaagccagtgtggatttatttgatcaaccccac
tatagcggccatacaagattcacatatgaagatgagagaagttgtgggagggactgccat
catcgcagagatgacatggacttagaatcccagcctttactgcataaaaaatccagccgc
tcacacatgtgcagaagtcactctcatcccttagttatgggtgccagtaaaagcaaatat
gctgacctttcagattccgattcagatgtatgtgagcgagaccctccttgtgtaaaaaca
gaaatgggccataactgttggtattcaccaaattacttctgcacatatccatccagggaa
cgacaagcatcatctgccccacacaagccaatgaggtactggtctgtagataagttaggc
aagtatcatcagttaagcaaagagtatcttccgggcacatgtcatggctcttgttattgc
agtagtttagaaatgctgcaacctcactgccacaaagagccgagatactttagctgctca
gacgagaagcttgaacgacggttagactgggagcactttcgtagtggtcactgctccttc
cttcaccatcatcaccactcctgtgacttagctcctattcatcccacatcacggagttta
gaggacctcagcagatgccacttgaggtgccacagacacatcttctcaccagaatgccaa
cctagatcaagccacagcggaaccctttataaaagaaggggttctgcacacttctctagt
ttggaatcagaagtatga
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