Xenopus tropicalis (tropical clawed frog): 100496503
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Entry
100496503 CDS
T01011
Symbol
dnmt3a
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A isoform X4
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00270
Cysteine and methionine metabolism
xtr01100
Metabolic pathways
xtr04148
Efferocytosis
Module
xtr_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100496503 (dnmt3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100496503 (dnmt3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100496503 (dnmt3a)
03032 DNA replication proteins [BR:
xtr03032
]
100496503 (dnmt3a)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100496503 (dnmt3a)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
100496503 (dnmt3a)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100496503 (dnmt3a)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
100496503 (dnmt3a)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100496503 (dnmt3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNM3A_N
ADD_DNMT3
DNMT3_ADD_GATA1-like
DNA_methylase
PWWP
Stomoxyn
Motif
Other DBs
NCBI-GeneID:
100496503
NCBI-ProteinID:
XP_002942400
Xenbase:
XB-GENE-959529
UniProt:
A0A8J0QYX3
LinkDB
All DBs
Position
5:161155659..161271210
Genome browser
AA seq
908 aa
AA seq
DB search
MKKTGRPGRKRKHSMAESATVSKDIASVPKCHTSPNSTRPDPIHNGEMDSRQHKAKRPTQ
DRPAPELSPRDTKTCDSPEEVPRDSDVTPVVENGCCTPSDDIDPQDMEDCDVSVISTPKK
RGRRSLSSSSEQSKEEREDDNSDSPKEEASTSQGIHRNSHCRGYRGRLRGGLSWETSLRQ
RPMQRLPFQAGDPYYISKRKRDEWLARWKREAEKKQQLAAVINAMEETVSREPQKEEEPC
PPASQQPTDPASPTVATTPEPVAPDAVDKNTSKSADDEAEYEDGRGFGIGELVWGKLRGF
SWWPGRIVSWWMTGRSRAAEGTRWVMWFGDSKFSVVCVEKLLPLSSFAGTFHQATYNKQP
MYRKAIYEVLQVASTRARKVFPSCPENDESDTSKAVEIQNKQMIEWALGGFQPSGPKGLE
PPEEERNPYKEVYTEMWVEPEAAAYTPPPPAKKPRKSTEKPKVKEIIDERTRERLVYEVR
QKCRNIEDICISCGSLNVTLEHPLFIGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGR
EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGIYGLLKRRDDWPSR
LQLFFANNHDQEFDPPKLYPPIAAEKRKPIRVLSLFDGIATGLLVLKDLGIHIERYIASE
VCEDSITVGMVRHQGKIMYVGDVRNITRKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLF
EGTGRLFFEFYRLLHEARPKEGDNRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDARE
VSAAHRARYFWGNLPGMNRPLVSTINDRLELQDCLEHGRLAKFSKVRTITTRSNSIKQGK
DQHFPVYMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAP
LKEFYACV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacggggcgtccggggagaaagcgcaagcacagcatggcagaaagcgctact
gtatccaaagacatcgcctcagtccctaagtgccacacgtccccaaacagcacgcgcccg
gatccaattcacaatggagagatggattccaggcaacacaaggccaaaaggcccacccag
gatcggccagccccagagctcagcccgagagacaccaagacctgtgactccccagaggaa
gtgcccagagacagtgacgtaaccccggtggtagaaaatggctgctgtacgccgagcgat
gacattgatcctcaggatatggaggactgtgatgtttcagtgatctctacccccaagaaa
agaggcagaagaagcctgtccagcagctccgagcagagtaaagaagagagggaagatgat
aactccgactcccccaaagaagaggcaagtaccagccaaggaatacaccgcaactcacac
tgcaggggataccgaggccggctgcgcggaggattaagctgggagacgagtctgcgccag
agacccatgcagaggctgcccttccaggccggggacccctattacatcagcaagaggaag
cgagacgagtggttggcccgatggaaaagggaggctgagaagaagcagcagctggcagcc
gtgatcaacgccatggaagaaacggtgtcacgggagcctcagaaggaggaggaaccctgt
ccgccggcctcccagcagcccactgaccctgcctcacccacggtggccaccacccccgag
ccagtcgcgcctgatgccgtagacaaaaatacgtccaagtctgccgacgacgaggcagag
tatgaggatggtcggggctttggcatcggagagttggtgtggggcaagctccgtgggttc
tcctggtggcccggccgcattgtatcatggtggatgacagggaggagccgcgcagcagag
gggacacgttgggtcatgtggtttggggacagcaagttctccgtggtttgtgtggagaaa
ctactgcctctcagttcattcgccggcaccttccatcaggccacctacaacaagcagccc
atgtaccgcaaagccatctatgaggttctccaggtggccagcacccgcgccagaaaggtt
ttcccatcgtgtccagagaacgatgagtccgacacttccaaagcagtagaaatccagaac
aagcagatgattgagtgggcgctgggcggctttcaaccctctggacccaaaggcctggaa
cctccagaagaggagcgcaacccatacaaagaagtttacacagaaatgtgggtggagccc
gaagcagctgcctacacccctccccctccagcaaaaaaacctcgaaaaagcacagaaaaa
cccaaggtcaaggaaatcatcgatgagcgcacacgagagagactggtctatgaagtgagg
caaaagtgcaggaacattgaagatatctgtatttcctgtggcagtttgaatgttaccctg
gaacaccccctgtttattgggggcatgtgccaaaactgcaagaactgctttctggagtgc
gcgtaccaatatgatgatgacggctatcagtcctactgcaccatatgctgtggcgggagg
gaggtgctaatgtgtggcaataataactgctgcaggtgcttttgtgtagagtgtgtagac
ttgctcgtgggacccggagcagcccaggcagctattaaagaggatccatggaactgctat
atgtgcggacacaaggggatctacgggctgctaaagagacgcgatgactggccctcgcgg
cttcagcttttctttgccaataaccacgaccaagaatttgacccaccaaagctttatccg
cctatagcagctgaaaagcggaagcctatccgagtactgtctctgttcgatggcattgca
acaggtctattggtgctaaaggatcttgggatccatatagaacgttacattgcctcagag
gtgtgtgaagattccatcactgtgggtatggtgcgacatcagggaaagatcatgtacgtg
ggggacgtgcgcaatatcacccgtaagcatattcaggaatggggcccttttgacctagtt
attgggggaagtccttgtaatgatctttccatcgtgaacccagcacggaaaggtctgttc
gaaggcaccgggagactcttttttgagttctatcgtttacttcatgaagcccgacctaag
gaaggagacaaccggccgttcttctggctctttgaaaacgtggtggccatgggcgttagt
gacaaaagggacatctcacgcttcctagagtccaacccagtgatgattgatgcgagggag
gtgtcggcagcccacagagctcgttacttctggggtaatcttcccggtatgaacaggcct
ctggtttctacaataaatgataggctggaattacaagactgtttggaacacggcaggtta
gcgaagtttagcaaggtccgtaccatcaccactaggtcaaactccatcaaacagggcaag
gaccagcatttccctgtgtacatgaacgagaaggaagacattctctggtgcactgagatg
gaaagggttttcggcttcccagtccactacactgacgtttccaacatgagccgcttggcc
aggcaaaggcttctgggaagatcctggagtgtaccagtcatccgtcacctctttgccccg
cttaaggaattctatgcctgtgtttaa
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