Xenopus tropicalis (tropical clawed frog): 100496522
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Entry
100496522 CDS
T01011
Symbol
cadm1
Name
(RefSeq) cell adhesion molecule 1 isoform X4
KO
K06781
cell adhesion molecule 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100496522 (cadm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100496522 (cadm1)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
100496522 (cadm1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C1-set
Syndecan
Motif
Other DBs
NCBI-GeneID:
100496522
NCBI-ProteinID:
XP_002932976
Xenbase:
XB-GENE-6033349
UniProt:
A0A8J0QJK8
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Position
7:83126063..83254702
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AA seq
431 aa
AA seq
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MASHPGAALRFLLLVTGLHAGLLQQGRSSSLQSSYENIDLLYEPLQMSGEHQNLVTEDVT
VVEGEVAIISCRVKNSDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSSNELRVSLSN
VTLEDEGRYLCQVYTDPPQEAFTTITVLVPPHNLVIDVQKDTYVEGEEVEMNCTALASKP
AAAIRWFKGNKELTAVKTDVEPMEERMFRVRSQLVLTAKREDDGIPIVCLVDHPAVKDLQ
TQQYLEVQYKPLVSVSVKYPQGLTREGETLELVCSATGKPSPERVLWQRVDDDLPEHVLI
LGDNLLFGNLNKTDNGTYRCEASNSVGSASADYTLFVYDASATTEPAVHDTRAGDETPLV
VDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQ
NSCEEKKEYFI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcatcccggagccgctctccgcttccttcttctggtaaccggactccacgca
ggactgctgcagcaaggaagaagttccagtcttcaaagttcctatgaaaacattgatttg
ctctatgagccactacagatgtctggggagcatcagaaccttgtaactgaagatgttact
gtggtggaaggagaagttgcaatcatcagctgccgggtaaagaatagtgacgactctgtc
atccagttgctcaaccctaacagacaaaccatctacttccgggatgtcagacccctgaaa
gatagccgatttcagttggtgaacttctccagtaacgaactgagagtttcactctctaat
gttactctggaagatgagggccgttatctctgccaggtctacactgaccctcctcaggag
gcatttacaacaattacagtgcttgttcctccacacaatttggtaattgatgtgcagaag
gacacatatgtggaaggggaagaggtggagatgaattgtacagcattggccagcaaacca
gcagcagcaatacgctggttcaagggaaacaaagagcttacagctgttaagacagatgta
gagcccatggaagagaggatgtttcgagtacgaagtcaacttgtgcttacagcaaaacgc
gaggatgatggcatccccattgtgtgtcttgttgaccatccagctgtgaaagacctacag
acccagcagtaccttgaggtgcaatataaaccactggtgagcgtatctgtgaaataccca
cagggcctaaccagagaaggagaaacattggagcttgtctgtagcgctacaggtaaaccc
agcccagagagagttttgtggcagcgagtagatgatgatcttccagaacacgtccttatc
ttaggtgacaacctgctctttggcaaccttaacaagacagacaatggcacttacaggtgc
gaggcctccaacagcgtgggcagtgcttcagcagattacactttgtttgtgtacgacgca
agtgcaacgacagagccagcagttcacgacacccgggcaggtgatgagacgcctctggta
gttgatcatgctgtgattggtggcgttgtggctgttgttgtctttgctatgctttgcctt
cttataatcttggggcgctactttgctcgacataaaggaacatatttcacccatgaagcc
aaaggagcagacgatgcagcagatgccgacacagcaattataaatgcagagggaggtcag
aacagctgtgaagagaagaaagagtattttatctag
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