KEGG T01011: 100496523

Xenopus tropicalis (tropical clawed frog): 100496523

Entry

100496523         CDS       T01011

Symbol

ccl5

Name

(RefSeq) C-C motif chemokine 5 isoform X3

K12499

C-C motif chemokine 5

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Pathway

xtr04060

Cytokine-cytokine receptor interaction

xtr04620

Toll-like receptor signaling pathway

xtr04621

NOD-like receptor signaling pathway

xtr04623

Cytosolic DNA-sensing pathway

xtr05168

Herpes simplex virus 1 infection

Brite

KEGG Orthology (KO) [BR:xtr00001]
09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100496523 (ccl5)
09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100496523 (ccl5)
   04621 NOD-like receptor signaling pathway
    100496523 (ccl5)
   04623 Cytosolic DNA-sensing pathway
    100496523 (ccl5)
09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100496523 (ccl5)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100496523 (ccl5)
   00536 Glycosaminoglycan binding proteins [BR:xtr00536]
    100496523 (ccl5)
Cytokines and neuropeptides [BR:xtr04052]
Cytokines
  Chemokines
   100496523 (ccl5)
Glycosaminoglycan binding proteins [BR:xtr00536]
Heparan sulfate / Heparin
  Chemokines
   100496523 (ccl5)

SSDB

Motif

Pfam:

IL8 CXCL16 VpsR Defensin_propep

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

LinkDB

Position

2:48758756..48763265

AA seq 94 aa
MKATLIILSVFLFVAFYNGAESAPVGSDVVSCCFDYIKKPIPPKHVADYFYTSSRCSRFA
VVLVTRKNRKICANPEDEWVNNIINVLEVPETQS

NT seq 285 nt +upstreamnt +downstreamnt
atgaaggcaacactgatcattctttcagtttttctctttgtggctttttataatggagcc
gagtctgcaccagttggttcagatgtcgtctcctgctgttttgattacataaagaagcca
atcccacccaaacacgtggctgattacttctacaccagtagccgctgctcccgatttgca
gttgtccttgtcacccgaaagaatcgaaagatatgtgcaaatccagaagatgaatgggtc
aataacatcattaatgtcctggaggtgcctgaaacacaatcataa

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