Xenopus tropicalis (tropical clawed frog): 100496617
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Entry
100496617 CDS
T01011
Symbol
pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Lip_C
Motif
Other DBs
NCBI-GeneID:
100496617
NCBI-ProteinID:
XP_002934529
Xenbase:
XB-GENE-977105
UniProt:
A0A6I8QBR2
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Position
5:complement(143249548..143294402)
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AA seq
1181 aa
AA seq
DB search
MNVPCVVGMNEVAWQETRGIMHASSGQEALGVGVGMVPSGAASAGQAHGNNPNAMPPGAA
SAQVPLSGRSQDDATVGYFFQRQAGEQLNGYANKHRWPTGDSIDAAVRSVDEMNHDFQAL
ALESRGMGELLPAKKFWEHEDPAKDGQKGMFLADEWRENTWGASHHSMSQPIMVQRRPGQ
SFHGNHDVASVLSPRSESGGLGVSMVEYVLSSSPADKLDPRFRKGVFSVRDCELDGPEKG
EQKGKASPFEEEKKRDLISADPDDVSKLNGRGLPNGIDTDCKDFNRTPGSRQASPTEIIE
RIGPNSSSAEVLGQHQNHMNNKPLSDEFPSTESQNLDGMEQVGLDSLQFDYPGNQIQMDS
AGAGVSLFDYNTQQQLFQRQNTLTVQQLTAAQQQQQQFTLAAAQQQHLTGMFSAGLAPAA
FVPNPYIISAGHPGADPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPAGLFQQQAAAAA
TAASSNNQQAATQATQGQQQVMRATSSQRPLTPNQGQQGQQPESLAAAAANQAQIFGQGL
ATSMPGYQVLTPTAYYDQTGALVVGPGARAGLAAQVRLVASGPVLISPAAAQAAAAASAT
GANSLTGPTNSIFRPLGPQQQQQQQPQQQQPNANLHSSSFYGNSAMTNNSQSSSLFSHGP
GQPGNTSLGFGSSNSLGSAIGSAFGGFGSSVGNSAGSSGSRRDSLSASSDLYKRSSSSLA
PIGQPFYNSLGFSSSPSPIGMPLPSQTSGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYI
SAAPGAEAKYRSAASTSSFFSSNSQLFPPSRLRYNRADIMPSGRSRLLEDFRNNRFPNLQ
LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKF
FEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCV
KDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPI
LEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKC
VTHSSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIR
PHITTLRKYTYGKHILAKLEKYYMKNTPDLGPLVGPPNGML
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttccatgtgtcgtaggtatgaatgaagtggcctggcaggagaccagaggaata
atgcatgcgagcagtggtcaggaagcccttggggttggagtagggatggtcccatctgga
gcggcgtcggcagggcaagcccatggaaataacccaaatgccatgcctccgggtgctgcc
agtgcccaggtgccgctgagcggccgctctcaggacgatgccacagtgggatatttcttc
cagaggcaggctggagagcagctcaacgggtacgccaataagcaccgctggcctacagga
gatagcatagatgctgcggtgaggtctgtggatgaaatgaatcatgacttccaggctctg
gcattagaatctcgtggaatgggcgagcttttacctgccaaaaagttttgggaacatgaa
gaccctgcaaaagatggacagaaagggatgttcctcgctgatgaatggagagagaataca
tggggggcctctcaccattccatgtcccagcctattatggtgcagagaagacccggacaa
agctttcacggaaaccatgatgtcgcttctgttctgtcacctcgttcagagagcggcggc
cttggagtgagcatggtagaatatgtgttgagttcctcccccgctgataaacttgatcca
cgattcagaaaaggagtctttagtgtccgagactgcgaattagatggaccagagaaaggc
gaacagaaaggtaaagcatctccttttgaagaggaaaagaaacgtgatctgatctctgct
gaccccgatgacgtctccaaattaaacggcaggggacttccgaacggcatcgatacggat
tgcaaagattttaatcggactccaggaagccggcaggcttcacccacagaaattatagaa
cgtattggcccaaactctagctctgctgaagttcttgggcaacaccagaaccacatgaat
aacaaacccttatcagatgagttccctagtactgaaagccagaatttggatggcatggaa
caggttggccttgactcattacagtttgactatcctggtaatcagatacaaatggactcg
gcgggagcaggtgtcagcttatttgactacaatactcaacagcagctatttcagcggcaa
aacacattgactgttcagcagctaacagcggctcagcagcagcaacagcagtttaccctg
gcagcagctcagcaacagcatttaactggcatgttttccgcaggcctggcaccagctgct
tttgtgccaaacccctacatcatcagtgcaggtcacccaggcgcagacccgtacacagca
gccggtttagcagctgctgccaccctagcaggccctgcagttgtccctccacaatattat
ggcgttccttggggagtgtacccagctggcttatttcagcaacaggcagctgccgcagcc
acagcggcaagcagcaacaaccagcaagcagcgacacaagcaacgcaaggacagcagcag
gttatgagggccacatccagtcagcgcccacttactcctaatcagggacaacaaggacag
cagccagaatcacttgcagcagctgcagcaaaccaagctcagatatttggacagggtctt
gctaccagcatgccaggctaccaggttctcactcccactgcctactatgatcagactggt
gccttggtggttggtcccggggccagagctgggcttgctgcacaagtacgtttagtggct
tcaggtcctgttctaatcagtcccgctgctgctcaagccgctgcagcagcttcggcgact
ggtgccaatagccttactggacccacaaacagtatcttcagacccttgggtcctcagcag
cagcagcaacagcagcctcagcagcagcagcccaatgcaaacctccactccagctctttc
tacggaaacagcgccatgaccaacaactctcagagcagctctctgttttctcatggacct
gggcagccaggaaacacgtcccttggatttggaagcagcaattctctggggtcagccatt
ggatctgcttttgggggatttgggtcatcagttggcaattccgcaggtagtagtggctca
aggagagattccctgtctgctagctctgacttgtacaaaaggtctagcagcagcctagca
cccatagggcagccattttacaatagcctgggattctcctcttctccgagtccaataggc
atgcctctgccaagccaaacgtcaggacattcactaacgccaccgccatccctttcatca
catggatcctcatccagtttgcatttagggggactgacaaatggcagcggccgttacatc
tctgcagcgccaggggcagaggcaaagtatcggagtgctgccagcacctccagtttcttc
agttccaacagccagcttttccccccatcccgcctgcggtacaacagagctgacattatg
ccgtctgggcgcagcaggttgctggaggacttcaggaacaaccgttttccaaacctgcag
ctcagagacctgatggggcacatagtggagttctctcaagaccaacatggatctaggttt
atccagcagaaactggagcgtgccagcccggcagaacggcagctggtgttcagtgagatc
ctacaagctgcctatcagttgatgactgacgtatttggaaattatgtgattcaaaaattc
tttgagtttgggagcatggaccagaaacttgccttggcaacacggattcgtggccacgtt
ctacctctggctttgcaaatgtatggctgccgtgtcattcagaaggccctcgaatccata
tcaattgaccagcagagtgaaatggtgagagagctggatggccatgtgctgaaatgtgtg
aaggatcagaacggaaaccacgtggtacaaaagtgcattgagtgcgttcagccgcagtcg
cttcagttcatcattgacgcgttcaagggtcaggtgtatgtgctctccacccatccttat
ggctgcagggtgatacagcgcattctggaacactgcaccccagagcaaaccctgcccatt
ctggaagagctgcaccagagtacagaacagttagtgcaggatcagtacggtaattatgtg
atccagcatgtgctcgagcacggccgctctgacgacaagagcaaaatcgtgtccgaagtg
agagggaaagtactggctttgagtcagcacaaattcgctagcaacgttgttgagaaatgc
gtgacacactcctcccgcacagagcgagcgctgctgattgatgagatctgctgccagaat
gatggtcctcactgtgccttatacactatgatgaaggaccagtatgccaactatgtggta
cagaagatgatcgacatggccgagcctgcccagcgcaagatcatcatgcataagatccgt
ccgcacataacaaccttgcgcaaatacacctacgggaaacacattctggccaagctggag
aagtattacatgaagaacacccctgaccttggtcctctagtcgggccgcccaacggaatg
ctgtag
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